BMP7

History

%%{init: { 'logLevel': 'debug', 'theme': 'dark' } }%% timeline title Publication timing 2019-09-26 : Panea : BL

Relevance tier by entity

Entity Tier Description
BL 1 high-confidence BL gene1

Mutation incidence in large patient cohorts (GAMBL reanalysis)

Entity source frequency (%)
BL GAMBL genomes+capture 6.47
BL Thomas cohort 8.90
BL Panea cohort 5.00

Mutation pattern and selective pressure estimates

Entity aSHM Significant selection dN/dS (missense) dN/dS (nonsense)
BL No Yes 5.863 16.044
DLBCL No No 6.236 10.787
FL No No 1.371 0.000

BMP7 Hotspots

Chromosome Coordinate (hg19) ref>alt HGVSp
chr20 55841157 C>T A8T
chr20 55841157 C>G A8P
chr20 55841156 G>C A8G
chr20 55841155 AG>TA A8V
chr20 55840966 G>T H71Q
chr20 55840965 G>C L72V
chr20 55840962 G>C Q73E
chr20 55840958 C>T G74D
chr20 55840954 C>A K75N
chr20 55840953 G>T H76N
chr20 55840953 G>C H76D
chr20 55840953 G>A H76Y
chr20 55840944 C>G A79P
chr20 55840935 A>G F82L
chr20 55840918 G>C Y87*
chr20 55840913 G>T A89D

View coding variants in ProteinPaint hg19 or hg38

View all variants in GenomePaint hg19 or hg38

BMP7 Expression

References

1.
Panea R, Love C, Shingleton JR, Reddy A, Bailey J, Moormann A, Otieno J, Ong’echa J, Oduor C, Schroêder K, Masalu N, Chao N, Agajanian M, Major M, Fedoriw Y, Richards K, Rymkiewicz G, Miles R, Alobeid B, Bhagat G, Flowers C, Ondrejka S, Hsi E, Choi W, Au-Yeung R, Hartmann W, Lenz G, Meyerson H, Lin YY, Zhuang Y, Luftig M, Waldrop A, Dave T, Thakkar D, Sahay H, Li G, Palus B, Seshadri V, Kim S, Gascoyne R, Levy S, Mukhopadhyay M, Dunson D, Dave S. The whole genome landscape of Burkitt lymphoma subtypes. Blood. 2019;