FBXO11
Overview
Somatic mutations in FBXO11 are common in BL1,2 and appear in a small number of DLBCLs.3 This gene has some recurrent sites of mutations (hot spots). Mutations lead to stabilization of BCL6, an important transcriptional repressor involved in lymphomagenesis.4 These mutations present a potential novel target for therapeutic intervention, particularly through strategies aimed at degrading BCL6 or inhibiting its function.4
History
Mutations in this gene were first described in BL in 2015 by Pighi et al4 and in DLBCL by Hübschmann et al.5
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timeline
title Publication timing
2012-11-11 : Richter : BL
2013-12-13 : Parry : MZL
2021-05-05 : Hübschmann : DLBCL
Relevance tier by entity
| Entity | Tier | Description |
|---|---|---|
| 2 | relevance in MZL not firmly established1 | |
| 1 | high-confidence BL generichterRecurrentMutationID32012a? | |
| 1 | high-confidence DLBCL genehubschmannMutationalMechanismsShaping2021b? |
Mutation incidence in large patient cohorts (GAMBL reanalysis)
| Entity | source | frequency (%) |
|---|---|---|
| BL | GAMBL genomes+capture | 23.79 |
| BL | Thomas cohort | 21.60 |
| BL | Panea cohort | 15.80 |
| DLBCL | GAMBL genomes | 3.82 |
| DLBCL | Schmitz cohort | 2.13 |
| DLBCL | Reddy cohort | 2.10 |
| DLBCL | Chapuy cohort | 2.56 |
Mutation pattern and selective pressure estimates
| Entity | aSHM | Significant selection | dN/dS (missense) | dN/dS (nonsense) |
|---|---|---|---|---|
| BL | No | Yes | 14.801 | 114.063 |
| DLBCL | No | Yes | 2.464 | 39.449 |
| FL | No | No | 8.837 | 0.000 |
FBXO11 hot spots
| Chromosome | Coordinate | Mutation | HGVSp |
|---|---|---|---|
| chr2 | 48040426 | T>A | N725I |
| chr2 | 48040427 | T>C | N725D |
| chr2 | 48040427 | T>G | N725H |
| chr2 | 48040427 | T>A | N725Y |
| chr2 | 48040488 | TA>GC | I704S |
| chr2 | 48040489 | A>C | I704R |
| chr2 | 48040495 | T>A | N702I |
| chr2 | 48040495 | T>C | N702S |
| chr2 | 48040496 | T>C | N702D |
| chr2 | 48040496 | T>A | N702Y |
| chr2 | 48040500 | T>A | E700D |
| chr2 | 48040500 | T>G | E700D |
| chr2 | 48040501 | T>A | E700V |
| chr2 | 48040510 | C>T | G697D |
| chr2 | 48040511 | C>G | G697R |
View coding variants in ProteinPaint hg19 or hg38
View all variants in GenomePaint hg19 or hg38
FBXO11 Expression
References
1.
Parry M, Rose-Zerilli MJJ, Gibson J, Ennis S,
Walewska R, Forster J, Parker H, Davis Z, Gardiner A, Collins A, Oscier
DG, Strefford JC. Whole exome sequencing identifies novel recurrently
mutated genes in patients with splenic marginal zone lymphoma. PLoS One.
2013;8(12):e83244. PMCID: PMC3862727


