FOXO1
Relevance tier by entity
| Entity | Tier | Description |
|---|---|---|
| BL | 1 | high-confidence BL gene |
| DLBCL | 1 | high-confidence DLBCL gene |
| FL | 1 | high-confidence FL gene |
Mutation incidence in large patient cohorts (GAMBL reanalysis)
| Entity | source | frequency (%) |
|---|---|---|
| BL | GAMBL genomes+capture | 23.33 |
| BL | Thomas cohort | 28.00 |
| BL | Panea cohort | 21.80 |
| DLBCL | GAMBL genomes | 10.13 |
| DLBCL | Schmitz cohort | 7.23 |
| DLBCL | Reddy cohort | 2.40 |
| DLBCL | Chapuy cohort | 2.14 |
| FL | GAMBL genomes | 12.93 |
Mutation pattern and selective pressure estimates
| Entity | aSHM | Significant selection | dN/dS (missense) | dN/dS (nonsense) |
|---|---|---|---|---|
| BL | No | Yes | 14.841 | 5.170 |
| DLBCL | No | No | 6.936 | 0.000 |
| FL | No | Yes | 18.992 | 103.028 |
[!NOTE] First described in BL in 2012 by Schmitz R. First described in DLBCL in 2011 by Morin RD. First described in FL in 2011 by Morin RD
## FOXO1 Hotspots
| Chromosome | Coordinate (hg19) | ref>alt | HGVSp |
|---|---|---|---|
| chr13 | 41240294 | C>T | R19Q |
| chr13 | 41240294 | C>G | R19P |
| chr13 | 41240294 | C>A | R19L |
| chr13 | 41240289 | G>C | R21G |
| chr13 | 41240289 | G>A | R21C |
| chr13 | 41240288 | C>T | R21H |
| chr13 | 41240288 | C>G | R21P |
| chr13 | 41240288 | C>A | R21L |
| chr13 | 41240286 | AG>GC | S22P |
| chr13 | 41240286 | AG>GA | S22P |
| chr13 | 41240286 | A>G | S22P |
| chr13 | 41240285 | G>C | S22W |
| chr13 | 41240281 | G>T | C23* |
| chr13 | 41240280 | T>C | T24A |
| chr13 | 41240279 | G>A | T24I |
| chr13 | 41240277 | A>G | W25R |
| chr13 | 41240275 | C>T | W25* |
| chr13 | 41240274 | G>C | P26A |
| chr13 | 41240274 | G>A | P26S |
| chr13 | 41240273 | G>A | P26L |
| chr13 | 41240271 | G>C | L27V |
View coding variants in ProteinPaint hg19 or hg38
View all variants in GenomePaint hg19 or hg38


