FOXP1

Relevance tier by entity

Entity Tier Description
DLBCL 2-a aSHM target; Although recurrent, the relevance of mutations in DLBCL is tenuous

Mutation incidence in large patient cohorts (GAMBL reanalysis)

Entity source frequency (%)
DLBCL GAMBL genomes 0.57
DLBCL Schmitz cohort 3.62
DLBCL Reddy cohort 2.10
DLBCL Chapuy cohort 2.99

Mutation pattern and selective pressure estimates

Entity aSHM Significant selection dN/dS (missense) dN/dS (nonsense)
BL Yes No 1.218 9.469
DLBCL Yes No 7.387 17.777
FL Yes No 0.000 0.000

aSHM regions

chr_name hg19_start hg19_end region regulatory_comment
chr3 71104986 71119518 TSS-4 active_promoter
chr3 71176427 71180960 TSS-3 active_promoter
chr3 71350633 71357665 TSS-2 active_promoter
chr3 71503103 71504870 intron-1b intron
chr3 71550753 71551478 intron-1a intron
chr3 71626341 71635648 TSS-1 active_promoter

[!NOTE] First described in DLBCL in 2017 by Reddy A

View coding variants in ProteinPaint hg19 or hg38

image

View all variants in GenomePaint hg19 or hg38

image ## FOXP1 Expression image