ID3

Relevance tier by entity

Entity Tier Description
BL 1-a aSHM target and high-confidence BL gene
DLBCL 2-a aSHM target; Although recurrent, the relevance of mutations in DLBCL is tenuous
FL 2-a aSHM target; Although recurrent, the relevance of mutations in FL is tenuous

Mutation incidence in large patient cohorts (GAMBL reanalysis)

Entity source frequency (%)
BL GAMBL genomes+capture 45.50
BL Thomas cohort 47.00
BL Panea cohort 31.70
DLBCL GAMBL genomes 1.53
DLBCL Schmitz cohort 4.68
DLBCL Reddy cohort 3.50
DLBCL Chapuy cohort 0.85
FL GAMBL genomes 0.92

Mutation pattern and selective pressure estimates

Entity aSHM Significant selection dN/dS (missense) dN/dS (nonsense)
BL Yes Yes 42.419 439.808
DLBCL Yes Yes 0.000 30.520
FL Yes No 3.497 0.000

aSHM regions

chr_name hg19_start hg19_end region regulatory_comment
chr1 23885584 23885835 TSS NA

[!NOTE] First described in BL in 2012 by Richter J. First described in FL in 2023 by Russler-Germain DA

View coding variants in ProteinPaint hg19 or hg38

image

View all variants in GenomePaint hg19 or hg38

image ## ID3 Expression image