| Entity | Method | Paired samples | Unpaired samples | Cell lines | Example gene | Study |
|---|---|---|---|---|---|---|
| DLBCL | Sanger | 0 | 5 | 0 | BCL2 | Tanaka et al. (1992) |
| BL | Sanger | 0 | 0 | 9 | MYC | Johnston and Carroll (1992) |
| DLBCL | Sanger | 11 | 28 | 0 | MYC | L. Pasqualucci et al. (2001) |
| BL | Sanger | 0 | 24 | 0 | TP53 | Wilda et al. (2004) |
| DLBCL | Sanger | 134 | 0 | 20 | PRDM1 | Laura Pasqualucci et al. (2006) |
| DLBCL | Sanger | FAS | Scholl et al. (2007) | |||
| DLBCL | Sanger | 6 | 217 | 21 | CARD11 | Lenz et al. (2008) |
| DLBCL | Sanger | NFKBIA | Lake et al. (2009) | |||
| DLBCL | Sanger | 0 | 101 | TNFAIP3 | Compagno et al. (2009) | |
| FL | Sanger | 11 | 251 | 0 | TNFRSF14 | Cheung et al. (2010) |
| DLBCL, FL | RNAseq, WGS | 1 | 31 | 7 | EZH2 | Morin et al. (2010) |
| DLBCL | Sanger | 0 | 382 | 20 | MYD88 | Ngo et al. (2011) |
| DLBCL | RNAseq, WGS | 14 | 103 | 10 | B2M | Morin et al. (2011) |
| DLBCL | exome | 6 | 92 | 23 | CD36 | Laura Pasqualucci, Trifonov, et al. (2011) |
| DLBCL, FL | exome | 7 | 134 | 0 | CREBBP | Laura Pasqualucci, Dominguez-Sola, et al. (2011) |
| DLBCL | exome, Sanger | BRAF | Tiacci et al. (2011) | |||
| BL | RNAseq, WGS, exome | 53 | CCND3 | Richter et al. (2012) | ||
| DLBCL | Sanger | MIR142 | Kwanhian et al. (2012) | |||
| DLBCL | WGS | 40 | 0 | 0 | CXCR4 | Khodabakhshi et al. (2012) |
| DLBCL | exome | 55 | 0 | 0 | ACTB | Lohr et al. (2012) |
| BL | exome | ACAD9 | Love et al. (2012) | |||
| BL | RNAseq | C16orf48 | Schmitz et al. (2012) | |||
| DLBCL | exome | 34 | 39 | 21 | ARID1A | Zhang et al. (2013) |
| DLBCL | Sanger | 0 | 0 | 6 | EBF1 | Bohle et al. (2013) |
| DLBCL | WGS | 40 | 0 | 13 | ABI3BP | Morin et al. (2013) |
| BL | Sanger | ARHGEF1 | Muppidi et al. (2014) | |||
| BL | RNAseq | 0 | 20 | 0 | CCNF | Abate et al. (2015) |
| DLBCL | Sanger | 24 | 0 | 0 | STAT6 | Yildiz et al. (2015) |
| DLBCL | Sanger | MAP2K1 | Shin et al. (2015) | |||
| DLBCL | exome | 14 | 0 | 0 | XPO1 | Mareschal et al. (2016) |
| FL | WGS | 5 | 0 | 0 | ATP6AP1 | Okosun et al. (2016) |
| FL | exome | 22 | 0 | 0 | MAP2K1 | Louissaint et al. (2016) |
| DLBCL | exome | 38 | 0 | 0 | NFKBIE | Morin et al. (2016) |
| FL | exome | 61 | 69 | 0 | ARID1A | Krysiak et al. (2017) |
| DLBCL | exome | 96 | 0 | 0 | BTK | Albuquerque et al. (2017) |
| DLBCL | exome | 400 | 601 | 0 | ANKRD17 | Reddy et al. (2017) |
| DLBCL | exome | 137 | 167 | 0 | CCL4 | Chapuy et al. (2018) |
| DLBCL | WGS | 153 | 0 | 0 | AICDA | Arthur et al. (2018) |
| DLBCL | exome | 48 | 526 | 0 | CXCR5 | Schmitz et al. (2018) |
| BL | exome | 0 | 74 | 0 | KMT2C | Zhou et al. (2019) |
| BL | RNAseq, exome | 101 | 0 | 0 | ALPK2 | Panea et al. (2019) |
| BL | WGS | 106 | 0 | 0 | BACH2 | Grande et al. (2019) |
| FL | panel | 0 | 305 | 0 | CTSS | Bararia et al. (2020) |
| DLBCL | exome, panel | 135 | 0 | 0 | MS4A1 | Rushton et al. (2020) |
| DLBCL | WGS | 179 | 2 | 0 | ACTG1 | Hübschmann et al. (2021) |
| BL | panel | 0 | 298 | 0 | ADAMTS5 | Burkhardt et al. (2022) |
| BL | WGS | 193 | 82 | 22 | CDKN2C | Thomas et al. (2023) |
| FL | exome, panel | 0 | 370 | 0 | ABL2 | Russler-Germain et al. (2023) |
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