SIAH2
History
| Entity | Tier | Description |
|---|---|---|
| 2 | relevance in PMBL/cHL/GZL not firmly established | |
| 2 | relevance in DLBCL not firmly established |
Mutation incidence in large patient cohorts (GAMBL reanalysis)
| Entity | source | frequency (%) |
|---|---|---|
| DLBCL | GAMBL genomes | 1.72 |
| DLBCL | Schmitz cohort | 2.34 |
| DLBCL | Reddy cohort | 1.30 |
| DLBCL | Chapuy cohort | 1.28 |
Mutation pattern and selective pressure estimates
| Entity | aSHM | Significant selection | dN/dS (missense) | dN/dS (nonsense) |
|---|---|---|---|---|
| BL | No | No | 0.000 | 0 |
| DLBCL | No | No | 9.796 | 0 |
| FL | No | No | 4.227 | 0 |
[!NOTE] First described in DLBCL in 2021 by Hübschmann D
View coding variants in ProteinPaint hg19 or hg38
View all variants in GenomePaint hg19 or hg38
## SIAH2
Expression
## References 1. Reichel J,
Chadburn A, Rubinstein PG, Giulino-Roth L, Tam W, Liu Y, Gaiolla R, Eng
K, Brody J, Inghirami G, Carlo-Stella C, Santoro A, Rahal D, Totonchy J,
Elemento O, Cesarman E, Roshal M. Flow sorting and exome sequencing
reveal the oncogenome of primary Hodgkin and Reed-Sternberg cells.
Blood. 2015 Feb 12;125(7):1061–1072. PMID: 25488972 2. Hübschmann D,
Kleinheinz K, Wagener R, Bernhart SH, López C, Toprak UH, Sungalee S,
Ishaque N, Kretzmer H, Kreuz M, Waszak SM, Paramasivam N, Ammerpohl O,
Aukema SM, Beekman R, Bergmann AK, Bieg M, Binder H, Borkhardt A, Borst
C, Brors B, Bruns P, Carrillo de Santa Pau E, Claviez A, Doose G, Haake
A, Karsch D, Haas S, Hansmann ML, Hoell JI, Hovestadt V, Huang B, Hummel
M, Jäger-Schmidt C, Kerssemakers JNA, Korbel JO, Kube D, Lawerenz C,
Lenze D, Martens JHA, Ott G, Radlwimmer B, Reisinger E, Richter J, Rico
D, Rosenstiel P, Rosenwald A, Schillhabel M, Stilgenbauer S, Stadler PF,
Martín-Subero JI, Szczepanowski M, Warsow G, Weniger MA, Zapatka M,
Valencia A, Stunnenberg HG, Lichter P, Möller P, Loeffler M, Eils R,
Klapper W, Hoffmann S, Trümper L, ICGC MMML-Seq consortium, ICGC
DE-Mining consortium, BLUEPRINT consortium, Küppers R, Schlesner M,
Siebert R. Mutational mechanisms shaping the coding and noncoding genome
of germinal center derived B-cell lymphomas. Leukemia. 2021
Jul;35(7):2002–2016. PMCID: PMC8257491


