SPEN
History
Relevance tier by entity
| Entity | Tier | Description |
|---|---|---|
 |
1 | high-confidence MZL generossiCodingGenomeSplenic2012c? |
 |
1 | high-confidence PMBL/cHL/GZL genesarkozyMutationalLandscapeGray2021a? |
 |
1 | high-confidence DLBCL generossiCodingGenomeSplenic2012c? |
Mutation incidence in large patient cohorts (GAMBL reanalysis)
| Entity | source | frequency (%) |
|---|---|---|
| DLBCL | GAMBL genomes | 4.78 |
| DLBCL | Schmitz cohort | 10.00 |
| DLBCL | Reddy cohort | 7.41 |
| DLBCL | Chapuy cohort | 9.83 |
Mutation pattern and selective pressure estimates
| Entity | aSHM | Significant selection | dN/dS (missense) | dN/dS (nonsense) |
|---|---|---|---|---|
| BL | No | No | 1.456 | 0.000 |
| DLBCL | No | No | 0.900 | 13.083 |
| FL | No | No | 1.765 | 25.228 |
SPEN Hotspots
| Chromosome | Coordinate (hg19) | ref>alt | HGVSp |
|---|---|---|---|
| chr1 | 16256846 | C>T | R1371* |
| chr1 | 16261814 | C>T | R3027* |
View coding variants in ProteinPaint hg19 or hg38
View all variants in GenomePaint hg19 or hg38
SPEN Expression
References
Citing
If you use the information or data from this site, please cite
Krysta Coyle, Kostiantyn Dreval, Daniel Hodson and Ryan D. Morin. Audit of B-cell cancer genes. Blood Adv (2025) 9 (8): 2019–2031.
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