TCF3
Relevance tier by entity
| Entity | Tier | Description |
|---|---|---|
| BL | 1 | high-confidence BL gene |
Mutation incidence in large patient cohorts (GAMBL reanalysis)
| Entity | source | frequency (%) |
|---|---|---|
| BL | GAMBL genomes+capture | 11.55 |
| BL | Thomas cohort | 11.00 |
| BL | Panea cohort | 9.90 |
Mutation pattern and selective pressure estimates
| Entity | aSHM | Significant selection | dN/dS (missense) | dN/dS (nonsense) |
|---|---|---|---|---|
| BL | No | No | 4.463 | 34.108 |
| DLBCL | No | No | 1.567 | 0.000 |
| FL | No | No | 0.000 | 0.000 |
[!NOTE] First described in BL in 2012 by Schmitz R
## TCF3 Hotspots
| Chromosome | Coordinate (hg19) | ref>alt | HGVSp |
|---|---|---|---|
| chr19 | 1612366 | A>T | N551K |
| chr19 | 1612366 | A>C | N551K |
| chr19 | 1612349 | A>T | V557E |
| chr19 | 1612344 | C>T | V559M |
| chr19 | 1612337 | T>A | D561V |
| chr19 | 1612336 | A>T | D561E |
| chr19 | 1612336 | A>C | D561E |
| chr19 | 1612329 | C>T | E564K |
View coding variants in ProteinPaint hg19 or hg38
View all variants in GenomePaint hg19 or hg38
Citing
If you use the information or data from this site, please cite
Krysta Coyle, Kostiantyn Dreval, Daniel Hodson and Ryan D. Morin. Audit of B-cell cancer genes. Blood Adv (2025) 9 (8): 2019–2031.
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