TP53

History

%%{init: { 'logLevel': 'debug', 'theme': 'dark' } }%% timeline title Publication timing 2004-03-01 : Wilda : BL 2011-07-27 : Morin : FL 2012-08-27 : Rossi : MZL 2013-11-05 : Be : MCL 2018-05-31 : Tiacci : PMBL

Relevance tier by entity

Entity	Tier	Description
	1	high-confidence MZL gene^{rossiCodingGenomeSplenic2012c?}
	1	high-confidence PMBL/cHL/GZL gene^{tiacciPervasiveMutationsJAKSTAT2018b?}
	1	high-confidence BL gene¹
	1	high-confidence DLBCL gene^{lohrDiscoveryPrioritizationSomatic2012a?}
	1	high-confidence FL gene²
	1	high-confidence MCL gene³

Mutation incidence in large patient cohorts (GAMBL reanalysis)

Entity	source	frequency (%)
BL	GAMBL genomes+capture	45.50
BL	Thomas cohort	41.90
BL	Panea cohort	43.60
DLBCL	GAMBL genomes	27.53
DLBCL	Schmitz cohort	22.34
DLBCL	Reddy cohort	10.91
DLBCL	Chapuy cohort	21.37
FL	GAMBL genomes	6.93
MCL	GAMBL genomes	9.00

Mutation pattern and selective pressure estimates

Entity	aSHM	Significant selection	dN/dS (missense)	dN/dS (nonsense)
BL	No	Yes	83.783	58.309
DLBCL	No	Yes	127.531	143.760
FL	No	Yes	63.211	142.226

View coding variants in ProteinPaint hg19 or hg38

View all variants in GenomePaint hg19 or hg38

TP53 Expression

References

Wilda M, Bruch J, Harder L, Rawer D, Reiter A, Borkhardt A, Woessmann W. Inactivation of the ARF-MDM-2-p53 pathway in sporadic Burkitt’s lymphoma in children. Leukemia. 2004 Mar;18(3):584–588.

Morin RD, Mendez-Lago M, Mungall AJ, Goya R, Mungall KL, Corbett RD, Johnson NA, Severson TM, Chiu R, Field M, Jackman S, Krzywinski M, Scott DW, Trinh DL, Tamura-Wells J, Li S, Firme MR, Rogic S, Griffith M, Chan S, Yakovenko O, Meyer IM, Zhao EY, Smailus D, Moksa M, Chittaranjan S, Rimsza L, Brooks-Wilson A, Spinelli JJ, Ben-Neriah S, Meissner B, Woolcock B, Boyle M, McDonald H, Tam A, Zhao Y, Delaney A, Zeng T, Tse K, Butterfield Y, Birol I, Holt R, Schein J, Horsman DE, Moore R, Jones SJM, Connors JM, Hirst M, Gascoyne RD, Marra MA. Frequent mutation of histone-modifying genes in non-Hodgkin lymphoma. Nature. 2011 Jul 27;476(7360):298–303. PMCID: PMC3210554

Beà S, Valdés-Mas R, Navarro A, Salaverria I, Martín-Garcia D, Jares P, Giné E, Pinyol M, Royo C, Nadeu F, Conde L, Juan M, Clot G, Vizán P, Croce LD, Puente DA, López-Guerra M, Moros A, Roue G, Aymerich M, Villamor N, Colomo L, Martínez A, Valera A, Martín-Subero JI, Amador V, Hernández L, Rozman M, Enjuanes A, Forcada P, Muntañola A, Hartmann EM, Calasanz MJ, Rosenwald A, Ott G, Hernández-Rivas JM, Klapper W, Siebert R, Wiestner A, Wilson WH, Colomer D, López-Guillermo A, López-Otín C, Puente XS, Campo E. Landscape of somatic mutations and clonal evolution in mantle cell lymphoma. PNAS. 2013;110(45):18250–18255.