DLBCL_genes_with_bib.md
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# DLBCL genes
2 2
3
-| Gene | Tier | DLBCL Reference | Other references |
4
-|:---------:|:----:|:------------------------------------------------:|:-----------------------------:|
5
-| ABI3BP | 2 | (Morin et al. 2013) | |
6
-| ACTB | 1 | (Lohr et al. 2012) | |
7
-| ACTG1 | 1 | (Hübschmann et al. 2021) | |
8
-| ADAMTS1 | 2 | (Hübschmann et al. 2021) | |
9
-| AICDA | 2 | (Arthur et al. 2018) | |
10
-| ANKRD12 | 2 | (Hübschmann et al. 2021) | |
11
-| ANKRD17 | 2 | (Reddy et al. 2017) | |
12
-| ARID1A | 1 | (Zhang et al. 2013) | (Krysiak et al. 2017) |
13
-| ARID1B | 2 | (Reddy et al. 2017) | |
14
-| ARID5B | 2 | (Reddy et al. 2017) | |
15
-| ATM | 1 | (Reddy et al. 2017) | |
16
-| ATR | 2 | (Reddy et al. 2017) | |
17
-| B2M | 1 | (Morin et al. 2011) | |
18
-| BCL10 | 1 | (Morin et al. 2011) | (Russler-Germain et al. 2023) |
19
-| BCL11A | 1 | | |
20
-| BCL2 | 1 | (Tanaka et al. 1992) | (Morin et al. 2011) |
21
-| BCL6 | 1 | (Morin et al. 2011) | |
22
-| BCL7A | 1 | (Arthur et al. 2018) | (Krysiak et al. 2017) |
23
-| BCOR | 1 | | |
24
-| BCR | 1 | | |
25
-| BIRC3 | 2 | (Arthur et al. 2018) | |
26
-| BIRC6 | 1 | (Reddy et al. 2017) | |
27
-| BLK | 2 | | |
28
-| BRAF | 1 | (Tiacci et al. 2011) | |
29
-| BRINP3 | 2 | (Reddy et al. 2017) | |
30
-| BTBD3 | 2 | (Reddy et al. 2017) | |
31
-| BTG1 | 1 | (Morin et al. 2011) | |
32
-| BTG2 | 1 | (Morin et al. 2011) | |
33
-| BTK | 1 | (Albuquerque et al. 2017) | (Krysiak et al. 2017) |
34
-| CADPS2 | 2 | (Hübschmann et al. 2021) | |
35
-| CARD11 | 1 | (Lenz et al. 2008) | (Morin et al. 2011) |
36
-| CASP8 | 1 | (Reddy et al. 2017) | |
37
-| CBLB | 2 | (Reddy et al. 2017) | |
38
-| CCL4 | 2 | (Chapuy et al. 2018) | |
39
-| CCND3 | 1 | (Morin et al. 2011) | |
40
-| CD22 | 2 | (Reddy et al. 2017) | |
41
-| CD274 | 1 | (Morin et al. 2011) | |
42
-| CD36 | 1 | (Laura Pasqualucci, Trifonov, et al. 2011) | |
43
-| CD44 | 2 | (Arthur et al. 2018) | |
44
-| CD58 | 1 | (Morin et al. 2011) | |
45
-| CD70 | 1 | (Morin et al. 2011) | (Russler-Germain et al. 2023) |
46
-| CD74 | 2 | (Arthur et al. 2018) | |
47
-| CD79B | 1 | (Morin et al. 2011) | |
48
-| CD83 | 1 | (Morin et al. 2013) | (Russler-Germain et al. 2023) |
49
-| CDC73 | 2 | (Reddy et al. 2017) | |
50
-| CDH9 | 2 | (Morin et al. 2013) | |
51
-| CDKN2A | 1 | (Morin et al. 2013) | |
52
-| CHD1 | 2 | (Reddy et al. 2017) | |
53
-| CHD8 | 2 | (Reddy et al. 2017) | |
54
-| CHST2 | 2 | (Reddy et al. 2017) | |
55
-| CIITA | 1 | (Morin et al. 2011) | |
56
-| CNOT2 | 2 | (Hübschmann et al. 2021) | |
57
-| CNTNAP5 | 2 | (Morin et al. 2013) | |
58
-| COQ7 | 2 | (Chapuy et al. 2018) | |
59
-| CREBBP | 1 | (Laura Pasqualucci, Dominguez-Sola, et al. 2011) | |
60
-| CRIP1 | 2 | (Chapuy et al. 2018) | |
61
-| CXCR4 | 1 | (Khodabakhshi et al. 2012) | (Krysiak et al. 2017) |
62
-| CXCR5 | 1 | (Schmitz et al. 2018) | |
63
-| DAZAP1 | 1 | (Pararajalingam et al. 2020) | |
64
-| DCAF6 | 2 | (Reddy et al. 2017) | |
65
-| DDX10 | 2 | (Reddy et al. 2017) | |
66
-| DDX3X | 1 | (Schmitz et al. 2018) | |
67
-| DHX16 | 2 | (Hübschmann et al. 2021) | |
68
-| DICER1 | 2 | (Reddy et al. 2017) | |
69
-| DNAH5 | 2 | (Morin et al. 2013) | |
70
-| DNM2 | 2 | (Hübschmann et al. 2021) | |
71
-| DNMT3A | 2 | (Reddy et al. 2017) | |
72
-| DOCK1 | 2 | (Chapuy et al. 2018) | |
73
-| DSG4 | 2 | (Morin et al. 2013) | |
74
-| DTX1 | 1 | (Schmitz et al. 2018) | |
75
-| DUSP2 | 1 | (Morin et al. 2013) | |
76
-| EBF1 | 1 | (Bohle et al. 2013) | |
77
-| EEF1A1 | 1 | (Hübschmann et al. 2021) | |
78
-| EIF2AK3 | 2 | | |
79
-| EP300 | 1 | (Laura Pasqualucci, Dominguez-Sola, et al. 2011) | |
80
-| ETS1 | 1 | (Morin et al. 2011) | |
81
-| ETV6 | 1 | (Arthur et al. 2018) | |
82
-| EZH2 | 1 | (Morin et al. 2010) | |
83
-| EZR | 2 | | |
84
-| FAM102A | 2 | | |
85
-| FAM38B | 2 | (Morin et al. 2013) | |
86
-| FANK1 | 2 | | |
87
-| FAS | 1 | (Scholl et al. 2007) | |
88
-| FAT4 | 2 | (Morin et al. 2013) | |
89
-| FBXO11 | 1 | (Hübschmann et al. 2021) | |
90
-| FBXW7 | 1 | (Zhang et al. 2013) | |
91
-| FCRL3 | 2 | | |
92
-| FNBP1 | 2 | | |
93
-| FNDC1 | 2 | (Morin et al. 2013) | |
94
-| FOXC1 | 1 | (Schmitz et al. 2018) | |
95
-| FOXO1 | 1 | (Morin et al. 2011) | |
96
-| FOXP1 | 2 | (Reddy et al. 2017) | |
97
-| FUBP1 | 2 | (Reddy et al. 2017) | |
98
-| FUT5 | 2 | (Chapuy et al. 2018) | |
99
-| GABRA2 | 2 | (Chapuy et al. 2018) | |
100
-| GAK | 2 | (Hübschmann et al. 2021) | |
101
-| GNA13 | 1 | (Morin et al. 2011) | |
102
-| GNAI2 | 1 | (Morin et al. 2013) | |
103
-| GNAS | 2 | (Reddy et al. 2017) | |
104
-| GOLGA5 | 2 | (Reddy et al. 2017) | |
105
-| GPC5 | 2 | (Schmitz et al. 2018) | |
106
-| GRB2 | 1 | (Laura Pasqualucci, Trifonov, et al. 2011) | |
107
-| GRHPR | 1 | (Arthur et al. 2018) | |
108
-| GSG2 | 2 | (Schmitz et al. 2018) | |
109
-| HDAC7 | 2 | (Morin et al. 2013) | |
110
-| HIST1H1B | 1 | (Chapuy et al. 2018) | (Krysiak et al. 2017) |
111
-| HIST1H1C | 1 | (Morin et al. 2011) | |
112
-| HIST1H1D | 1 | (Morin et al. 2013) | (Krysiak et al. 2017) |
113
-| HIST1H1E | 1 | (Morin et al. 2013) | (Krysiak et al. 2017) |
114
-| HIST1H2AC | 1 | (Morin et al. 2013) | (Krysiak et al. 2017) |
115
-| HIST1H2AG | 2 | (Morin et al. 2013) | (Krysiak et al. 2017) |
116
-| HIST1H2AM | 1 | | (Krysiak et al. 2017) |
117
-| HIST1H2BC | 1 | (Reddy et al. 2017) | (Krysiak et al. 2017) |
118
-| HIST1H2BK | 1 | | |
119
-| HIST1H3B | 1 | (Zhang et al. 2013) | |
120
-| HIST2H2BE | 1 | (Schmitz et al. 2018) | |
121
-| HLA-A | 1 | | |
122
-| HLA-B | 1 | | |
123
-| HLA-C | 1 | | |
124
-| HLA-DMA | 1 | | |
125
-| HLA-DMB | 1 | | |
126
-| HLA-DQA1 | 1 | (Hübschmann et al. 2021) | |
127
-| HNF1B | 2 | (Laura Pasqualucci, Trifonov, et al. 2011) | |
128
-| HNRNPD | 1 | | |
129
-| HNRNPH1 | 1 | (Pararajalingam et al. 2020) | |
130
-| HNRNPU | 1 | (Reddy et al. 2017) | |
131
-| HRAS | 2 | (Reddy et al. 2017) | |
132
-| HVCN1 | 1 | | (Krysiak et al. 2017) |
133
-| ID3 | 2 | (Schmitz et al. 2012) | |
134
-| IER2 | 2 | (Morin et al. 2013) | |
135
-| IFNGR1 | 2 | (Morin et al. 2013) | |
136
-| IGLL5 | 2 | | (Russler-Germain et al. 2023) |
137
-| IKBKB | 2 | (Reddy et al. 2017) | |
138
-| IKBKE | 2 | (Hübschmann et al. 2021) | |
139
-| IKZF3 | 1 | (Morin et al. 2013) | |
140
-| IL16 | 1 | | |
141
-| IL4R | 1 | (Duns et al. 2021) | |
142
-| IL6 | 2 | (Chapuy et al. 2018) | |
143
-| INO80 | 2 | (Zhang et al. 2013) | |
144
-| IRAG2 | 2 | | |
145
-| IRF1 | 2 | (Hübschmann et al. 2021) | |
146
-| IRF4 | 1 | (Morin et al. 2011) | |
147
-| IRF8 | 1 | (Morin et al. 2011) | |
148
-| ITPKB | 1 | (Schmitz et al. 2018) | |
149
-| JAK1 | 2 | (Zhang et al. 2013) | |
150
-| JAK3 | 2 | (Zhang et al. 2013) | |
151
-| JUNB | 1 | (Reddy et al. 2017) | |
152
-| KCMF1 | 2 | (Reddy et al. 2017) | |
153
-| KLF2 | 1 | (Laura Pasqualucci, Trifonov, et al. 2011) | |
154
-| KLHL14 | 1 | (Zhang et al. 2013) | |
155
-| KLHL21 | 2 | (Schmitz et al. 2018) | |
156
-| KLHL6 | 1 | (Morin et al. 2011) | |
157
-| KMT2C | 1 | (Zhang et al. 2013) | |
158
-| KMT2D | 1 | (Morin et al. 2011) | |
159
-| KRAS | 1 | (Lohr et al. 2012) | |
160
-| LAMA5 | 2 | (Schmitz et al. 2018) | |
161
-| LAPTM5 | 2 | | (Hübschmann et al. 2021) |
162
-| LCOR | 1 | (Arthur et al. 2018) | |
163
-| LIN54 | 2 | (Reddy et al. 2017) | |
164
-| LPP | 2 | (Arthur et al. 2018) | |
165
-| LRP12 | 2 | (Hübschmann et al. 2021) | |
166
-| LRRN3 | 2 | (Morin et al. 2013) | |
167
-| LTB | 1 | (Chapuy et al. 2018) | |
168
-| LYN | 1 | (Chapuy et al. 2018) | |
169
-| MAGT1 | 2 | (Reddy et al. 2017) | |
170
-| MALAT1 | 2 | (Arthur et al. 2018) | |
171
-| MAP2K1 | 2 | (Shin et al. 2015) | (Louissaint et al. 2016) |
172
-| MAP4K4 | 2 | (Reddy et al. 2017) | |
173
-| MARK1 | 2 | (Reddy et al. 2017) | |
174
-| MCL1 | 1 | (Reddy et al. 2017) | |
175
-| MECOM | 2 | (Reddy et al. 2017) | |
176
-| MEF2B | 1 | (Morin et al. 2011) | |
177
-| MEF2C | 1 | (Arthur et al. 2018) | |
178
-| MET | 2 | (Reddy et al. 2017) | |
179
-| MGA | 1 | (Zhang et al. 2013) | |
180
-| MIR142 | 2 | (Kwanhian et al. 2012) | |
181
-| MIR155HG | 2 | | |
182
-| MPDZ | 2 | (Morin et al. 2013) | |
183
-| MPEG1 | 1 | (Morin et al. 2013) | |
184
-| MS4A1 | 1 | (Rushton et al. 2020) | |
185
-| MSH2 | 2 | (Reddy et al. 2017) | |
186
-| MSH6 | 2 | (Reddy et al. 2017) | |
187
-| MTOR | 1 | (Zhang et al. 2013) | |
188
-| MYB | 2 | (Reddy et al. 2017) | |
189
-| MYBPC2 | 2 | (Schmitz et al. 2018) | |
190
-| MYC | 1 | (L. Pasqualucci et al. 2001) | |
191
-| MYD88 | 1 | (Ngo et al. 2011) | |
192
-| MYO1E | 2 | | |
193
-| MYOM2 | 1 | (Laura Pasqualucci, Trifonov, et al. 2011) | |
194
-| N2RF2 | 2 | (Hübschmann et al. 2021) | |
195
-| NANOG | 2 | (Chapuy et al. 2018) | |
196
-| NAV1 | 2 | (Chapuy et al. 2018) | |
197
-| NCOA3 | 2 | | |
198
-| NCOR1 | 2 | (Reddy et al. 2017) | |
199
-| NCOR2 | 1 | | |
200
-| NEAT1 | 2 | (Arthur et al. 2018) | |
201
-| NF1 | 2 | (Reddy et al. 2017) | |
202
-| NFKB1 | 1 | | |
203
-| NFKB2 | 2 | (Reddy et al. 2017) | |
204
-| NFKBIA | 1 | (Lake et al. 2009) | (Russler-Germain et al. 2023) |
205
-| NFKBIE | 1 | (Morin et al. 2016) | |
206
-| NFKBIZ | 1 | (Morin et al. 2016) | |
207
-| NLRC5 | 1 | | |
208
-| NLRP5 | 2 | (Morin et al. 2013) | |
209
-| NLRP8 | 2 | (Chapuy et al. 2018) | |
210
-| NOL9 | 1 | (Schmitz et al. 2018) | |
211
-| NOTCH1 | 1 | (Laura Pasqualucci, Trifonov, et al. 2011) | |
212
-| NOTCH2 | 1 | (Trøen et al. 2008) | |
213
-| ODZ3 | 2 | (Morin et al. 2013) | |
214
-| OSBPL10 | 1 | (Arthur et al. 2018) | |
215
-| P2RX5 | 2 | (Morin et al. 2013) | |
216
-| P2RY8 | 1 | (Lohr et al. 2012) | |
217
-| PAPOLG | 2 | (Schmitz et al. 2018) | |
218
-| PASK | 2 | (Morin et al. 2013) | |
219
-| PAX5 | 2 | (L. Pasqualucci et al. 2001) | |
220
-| PCBP1 | 1 | | |
221
-| PCDHB11 | 2 | (Morin et al. 2013) | |
222
-| PCLO | 2 | (Lohr et al. 2012) | |
223
-| PDE4DIP | 2 | (Chapuy et al. 2018) | |
224
-| PDS5B | 2 | (Morin et al. 2013) | (Hübschmann et al. 2021) |
225
-| PHF6 | 2 | (Reddy et al. 2017) | |
226
-| PIK3CD | 2 | (Reddy et al. 2017) | |
227
-| PIK3R1 | 2 | (Zhang et al. 2013) | |
228
-| PIM1 | 1 | (L. Pasqualucci et al. 2001) | |
229
-| PIM2 | 1 | (Arthur et al. 2018) | |
230
-| PKD1 | 2 | (Morin et al. 2013) | |
231
-| PNPO | 2 | (Hübschmann et al. 2021) | |
232
-| POGZ | 2 | (Morin et al. 2013) | |
233
-| POU2AF1 | 1 | | (Krysiak et al. 2017) |
234
-| POU2F2 | 1 | (Zhang et al. 2013) | (Krysiak et al. 2017) |
235
-| PPP1R9B | 2 | | |
236
-| PRDM1 | 1 | (**pasqualucciInactivationPRDM1BLIMP12006?**) | |
237
-| PRKCB | 2 | (Morin et al. 2013) | |
238
-| PRKDC | 1 | (Schmitz et al. 2018) | (Hübschmann et al. 2021) |
239
-| PRPS1 | 2 | (Chapuy et al. 2018) | |
240
-| PTEN | 1 | | |
241
-| PTMA | 2 | | |
242
-| PTPN1 | 2 | | |
243
-| PTPN23 | 2 | (Morin et al. 2013) | |
244
-| PTPN6 | 2 | (Reddy et al. 2017) | |
245
-| PTPRD | 1 | | |
246
-| PTPRK | 2 | (Reddy et al. 2017) | |
247
-| RAC2 | 2 | (Hübschmann et al. 2021) | |
248
-| RAD9A | 2 | (Chapuy et al. 2018) | |
249
-| RARA | 2 | (Reddy et al. 2017) | |
250
-| RB1 | 1 | (Morin et al. 2013) | |
251
-| RCC | 2 | | |
252
-| RFTN1 | 2 | (Arthur et al. 2018) | |
253
-| RFX7 | 1 | | |
254
-| RFXAP | 1 | | |
255
-| RHEX | 2 | | |
256
-| RHOA | 1 | (L. Pasqualucci et al. 2001) | |
257
-| RHOH | 2 | | |
258
-| RRAGC | 1 | (Okosun et al. 2016) | |
259
-| RUBCNL | 2 | | |
260
-| RUNX1 | 2 | (Reddy et al. 2017) | |
261
-| S1PR2 | 1 | (Morin et al. 2011) | |
262
-| SAMD9L | 2 | (Morin et al. 2013) | |
263
-| SARM1 | 2 | (Morin et al. 2013) | |
264
-| SEL1L3 | 2 | | |
265
-| SEPTIN9 | 2 | | |
266
-| SERPINA9 | 2 | (Arthur et al. 2018) | |
267
-| SETD1B | 1 | (Reddy et al. 2017) | |
268
-| SETD2 | 2 | (Zhang et al. 2013) | |
269
-| SETD5 | 2 | (Reddy et al. 2017) | |
270
-| SF3B1 | 1 | | |
271
-| SGK1 | 1 | (Morin et al. 2011) | |
272
-| SIAH2 | 2 | (Hübschmann et al. 2021) | |
273
-| SIN3A | 1 | | |
274
-| SLC34A2 | 2 | (Hübschmann et al. 2021) | |
275
-| SMARCA4 | 1 | (Zhang et al. 2013) | (Krysiak et al. 2017) |
276
-| SMEK1 | 2 | (Chapuy et al. 2018) | |
277
-| SOCS1 | 1 | (Morin et al. 2011) | |
278
-| SPEN | 1 | (Rossi et al. 2012) | |
279
-| SRRM2 | 2 | (Morin et al. 2013) | (Russler-Germain et al. 2023) |
280
-| ST6GAL1 | 2 | (Arthur et al. 2018) | |
281
-| STAT3 | 1 | (Ohgami et al. 2014) | |
282
-| STAT5B | 2 | (Zhang et al. 2013) | |
283
-| STAT6 | 1 | (Yildiz et al. 2015) | |
284
-| SYK | 2 | (Reddy et al. 2017) | |
285
-| SYPL1 | 2 | (Morin et al. 2013) | |
286
-| TAF1 | 1 | (Morin et al. 2013) | |
287
-| TAP1 | 2 | (Schmitz et al. 2018) | |
288
-| TBC1D4 | 2 | (Arthur et al. 2018) | |
289
-| TBL1XR1 | 1 | (Mareschal et al. 2016) | |
290
-| TCL1A | 2 | | |
291
-| TET2 | 1 | (Albuquerque et al. 2017) | |
292
-| TGFBR2 | 2 | (Reddy et al. 2017) | |
293
-| TIPARP | 2 | (Reddy et al. 2017) | |
294
-| TLR2 | 2 | (Chapuy et al. 2018) | |
295
-| TMEM30A | 1 | (Morin et al. 2011) | |
296
-| TMSB4X | 1 | (Albuquerque et al. 2017) | |
297
-| TNFAIP3 | 1 | (Compagno et al. 2009) | |
298
-| TNFRSF14 | 1 | (Cheung et al. 2010) | |
299
-| TOX | 1 | (Reddy et al. 2017) | |
300
-| TP53 | 1 | | (Morin et al. 2011) |
301
-| TRAF3 | 2 | (Laura Pasqualucci, Trifonov, et al. 2011) | |
302
-| TRAF6 | 2 | (Hübschmann et al. 2021) | |
303
-| TRIP12 | 1 | | |
304
-| TRRAP | 1 | (Parry et al. 2013) | |
305
-| UBE2A | 1 | (Reddy et al. 2017) | |
306
-| UBE2J1 | 2 | | |
307
-| UBR5 | 2 | (Zhang et al. 2013) | |
308
-| UNC5B | 2 | (Hübschmann et al. 2021) | |
309
-| UNC5C | 1 | | |
310
-| UNC5D | 2 | | |
311
-| USP7 | 1 | | |
312
-| VPS13B | 1 | | |
313
-| WAC | 2 | (Reddy et al. 2017) | |
314
-| WDFY3 | 2 | (Morin et al. 2013) | |
315
-| WEE1 | 1 | (Schmitz et al. 2018) | |
316
-| WNK1 | 2 | (Hübschmann et al. 2021) | |
317
-| XBP1 | 2 | | |
318
-| XPO1 | 1 | (Mareschal et al. 2016) | |
319
-| YY1 | 2 | (Reddy et al. 2017) | |
320
-| ZBTB7A | 2 | (Reddy et al. 2017) | |
321
-| ZC3H12A | 1 | (Arthur et al. 2018) | |
322
-| ZCCHC7 | 2 | (Arthur et al. 2018) | |
323
-| ZEB2 | 2 | (Zhang et al. 2013) | |
324
-| ZFAT | 2 | (Reddy et al. 2017) | |
325
-| ZFP36L1 | 1 | (Morin et al. 2011) | |
326
-| ZFX | 2 | (Reddy et al. 2017) | |
327
-| ZNF217 | 2 | (Hübschmann et al. 2021) | |
328
-| ZNF292 | 1 | (Zhang et al. 2013) | |
329
-| ZNF423 | 2 | (Chapuy et al. 2018) | |
330
-| ZNF608 | 1 | (Zhang et al. 2013) | (Krysiak et al. 2017) |
3
+| Gene | Tier | DLBCL Relevant references |
4
+|:---------:|:----:|:------------------------------------------------:|
5
+| ABI3BP | 2 | (Morin et al. 2013) |
6
+| ACTB | 1 | (Lohr et al. 2012) |
7
+| ACTG1 | 1 | (Hübschmann et al. 2021) |
8
+| ADAMTS1 | 2 | (Hübschmann et al. 2021) |
9
+| AICDA | 2 | (Arthur et al. 2018) |
10
+| ANKRD12 | 2 | (Hübschmann et al. 2021) |
11
+| ANKRD17 | 2 | (Reddy et al. 2017) |
12
+| ARID1A | 1 | (Zhang et al. 2013; Krysiak et al. 2017) |
13
+| ARID1B | 2 | (Reddy et al. 2017) |
14
+| ARID5B | 2 | (Reddy et al. 2017) |
15
+| ATM | 1 | (Reddy et al. 2017) |
16
+| ATR | 2 | (Reddy et al. 2017) |
17
+| B2M | 1 | (Morin et al. 2011) |
18
+| BCL10 | 1 | (Morin et al. 2011; Russler-Germain et al. 2023) |
19
+| BCL11A | 1 | \] |
20
+| BCL2 | 1 | (Tanaka et al. 1992; Morin et al. 2011) |
21
+| BCL6 | 1 | (Morin et al. 2011) |
22
+| BCL7A | 1 | (Arthur et al. 2018; Krysiak et al. 2017) |
23
+| BCOR | 1 | \] |
24
+| BCR | 1 | \] |
25
+| BIRC3 | 2 | (Arthur et al. 2018) |
26
+| BIRC6 | 1 | (Reddy et al. 2017) |
27
+| BLK | 2 | \] |
28
+| BRAF | 1 | (Tiacci et al. 2011) |
29
+| BRINP3 | 2 | (Reddy et al. 2017) |
30
+| BTBD3 | 2 | (Reddy et al. 2017) |
31
+| BTG1 | 1 | (Morin et al. 2011) |
32
+| BTG2 | 1 | (Morin et al. 2011) |
33
+| BTK | 1 | (Albuquerque et al. 2017; Krysiak et al. 2017) |
34
+| CADPS2 | 2 | (Hübschmann et al. 2021) |
35
+| CARD11 | 1 | (Lenz et al. 2008; Morin et al. 2011) |
36
+| CASP8 | 1 | (Reddy et al. 2017) |
37
+| CBLB | 2 | (Reddy et al. 2017) |
38
+| CCL4 | 2 | (Chapuy et al. 2018) |
39
+| CCND3 | 1 | (Morin et al. 2011) |
40
+| CD22 | 2 | (Reddy et al. 2017) |
41
+| CD274 | 1 | (Morin et al. 2011) |
42
+| CD36 | 1 | (Laura Pasqualucci, Trifonov, et al. 2011) |
43
+| CD44 | 2 | (Arthur et al. 2018) |
44
+| CD58 | 1 | (Morin et al. 2011) |
45
+| CD70 | 1 | (Morin et al. 2011; Russler-Germain et al. 2023) |
46
+| CD74 | 2 | (Arthur et al. 2018) |
47
+| CD79B | 1 | (Morin et al. 2011) |
48
+| CD83 | 1 | (Morin et al. 2013; Russler-Germain et al. 2023) |
49
+| CDC73 | 2 | (Reddy et al. 2017) |
50
+| CDH9 | 2 | (Morin et al. 2013) |
51
+| CDKN2A | 1 | (Morin et al. 2013) |
52
+| CHD1 | 2 | (Reddy et al. 2017) |
53
+| CHD8 | 2 | (Reddy et al. 2017) |
54
+| CHST2 | 2 | (Reddy et al. 2017) |
55
+| CIITA | 1 | (Morin et al. 2011) |
56
+| CNOT2 | 2 | (Hübschmann et al. 2021) |
57
+| CNTNAP5 | 2 | (Morin et al. 2013) |
58
+| COQ7 | 2 | (Chapuy et al. 2018) |
59
+| CREBBP | 1 | (Laura Pasqualucci, Dominguez-Sola, et al. 2011) |
60
+| CRIP1 | 2 | (Chapuy et al. 2018) |
61
+| CXCR4 | 1 | (Khodabakhshi et al. 2012; Krysiak et al. 2017) |
62
+| CXCR5 | 1 | (Schmitz et al. 2018) |
63
+| DAZAP1 | 1 | (Pararajalingam et al. 2020) |
64
+| DCAF6 | 2 | (Reddy et al. 2017) |
65
+| DDX10 | 2 | (Reddy et al. 2017) |
66
+| DDX3X | 1 | (Schmitz et al. 2018) |
67
+| DHX16 | 2 | (Hübschmann et al. 2021) |
68
+| DICER1 | 2 | (Reddy et al. 2017) |
69
+| DNAH5 | 2 | (Morin et al. 2013) |
70
+| DNM2 | 2 | (Hübschmann et al. 2021) |
71
+| DNMT3A | 2 | (Reddy et al. 2017) |
72
+| DOCK1 | 2 | (Chapuy et al. 2018) |
73
+| DSG4 | 2 | (Morin et al. 2013) |
74
+| DTX1 | 1 | (Schmitz et al. 2018) |
75
+| DUSP2 | 1 | (Morin et al. 2013) |
76
+| EBF1 | 1 | (Bohle et al. 2013) |
77
+| EEF1A1 | 1 | (Hübschmann et al. 2021) |
78
+| EIF2AK3 | 2 | \] |
79
+| EP300 | 1 | (Laura Pasqualucci, Dominguez-Sola, et al. 2011) |
80
+| ETS1 | 1 | (Morin et al. 2011) |
81
+| ETV6 | 1 | (Arthur et al. 2018) |
82
+| EZH2 | 1 | (Morin et al. 2010) |
83
+| EZR | 2 | \] |
84
+| FAM102A | 2 | \] |
85
+| FAM38B | 2 | (Morin et al. 2013) |
86
+| FANK1 | 2 | \] |
87
+| FAS | 1 | (Scholl et al. 2007) |
88
+| FAT4 | 2 | (Morin et al. 2013) |
89
+| FBXO11 | 1 | (Hübschmann et al. 2021) |
90
+| FBXW7 | 1 | (Zhang et al. 2013) |
91
+| FCRL3 | 2 | \] |
92
+| FNBP1 | 2 | \] |
93
+| FNDC1 | 2 | (Morin et al. 2013) |
94
+| FOXC1 | 1 | (Schmitz et al. 2018) |
95
+| FOXO1 | 1 | (Morin et al. 2011) |
96
+| FOXP1 | 2 | (Reddy et al. 2017) |
97
+| FUBP1 | 2 | (Reddy et al. 2017) |
98
+| FUT5 | 2 | (Chapuy et al. 2018) |
99
+| GABRA2 | 2 | (Chapuy et al. 2018) |
100
+| GAK | 2 | (Hübschmann et al. 2021) |
101
+| GNA13 | 1 | (Morin et al. 2011) |
102
+| GNAI2 | 1 | (Morin et al. 2013) |
103
+| GNAS | 2 | (Reddy et al. 2017) |
104
+| GOLGA5 | 2 | (Reddy et al. 2017) |
105
+| GPC5 | 2 | (Schmitz et al. 2018) |
106
+| GRB2 | 1 | (Laura Pasqualucci, Trifonov, et al. 2011) |
107
+| GRHPR | 1 | (Arthur et al. 2018) |
108
+| GSG2 | 2 | (Schmitz et al. 2018) |
109
+| HDAC7 | 2 | (Morin et al. 2013) |
110
+| HIST1H1B | 1 | (Chapuy et al. 2018; Krysiak et al. 2017) |
111
+| HIST1H1C | 1 | (Morin et al. 2011) |
112
+| HIST1H1D | 1 | (Morin et al. 2013; Krysiak et al. 2017) |
113
+| HIST1H1E | 1 | (Morin et al. 2013; Krysiak et al. 2017) |
114
+| HIST1H2AC | 1 | (Morin et al. 2013; Krysiak et al. 2017) |
115
+| HIST1H2AG | 2 | (Morin et al. 2013; Krysiak et al. 2017) |
116
+| HIST1H2AM | 1 | (Krysiak et al. 2017) |
117
+| HIST1H2BC | 1 | (Reddy et al. 2017; Krysiak et al. 2017) |
118
+| HIST1H2BK | 1 | \] |
119
+| HIST1H3B | 1 | (Zhang et al. 2013) |
120
+| HIST2H2BE | 1 | (Schmitz et al. 2018) |
121
+| HLA-A | 1 | \] |
122
+| HLA-B | 1 | \] |
123
+| HLA-C | 1 | \] |
124
+| HLA-DMA | 1 | \] |
125
+| HLA-DMB | 1 | \] |
126
+| HLA-DQA1 | 1 | (Hübschmann et al. 2021) |
127
+| HNF1B | 2 | (Laura Pasqualucci, Trifonov, et al. 2011) |
128
+| HNRNPD | 1 | \] |
129
+| HNRNPH1 | 1 | (Pararajalingam et al. 2020) |
130
+| HNRNPU | 1 | (Reddy et al. 2017) |
131
+| HRAS | 2 | (Reddy et al. 2017) |
132
+| HVCN1 | 1 | (Krysiak et al. 2017) |
133
+| ID3 | 2 | (Schmitz et al. 2012) |
134
+| IER2 | 2 | (Morin et al. 2013) |
135
+| IFNGR1 | 2 | (Morin et al. 2013) |
136
+| IGLL5 | 2 | (Russler-Germain et al. 2023) |
137
+| IKBKB | 2 | (Reddy et al. 2017) |
138
+| IKBKE | 2 | (Hübschmann et al. 2021) |
139
+| IKZF3 | 1 | (Morin et al. 2013) |
140
+| IL16 | 1 | \] |
141
+| IL4R | 1 | (Duns et al. 2021) |
142
+| IL6 | 2 | (Chapuy et al. 2018) |
143
+| INO80 | 2 | (Zhang et al. 2013) |
144
+| IRAG2 | 2 | \] |
145
+| IRF1 | 2 | (Hübschmann et al. 2021) |
146
+| IRF4 | 1 | (Morin et al. 2011) |
147
+| IRF8 | 1 | (Morin et al. 2011) |
148
+| ITPKB | 1 | (Schmitz et al. 2018) |
149
+| JAK1 | 2 | (Zhang et al. 2013) |
150
+| JAK3 | 2 | (Zhang et al. 2013) |
151
+| JUNB | 1 | (Reddy et al. 2017) |
152
+| KCMF1 | 2 | (Reddy et al. 2017) |
153
+| KLF2 | 1 | (Laura Pasqualucci, Trifonov, et al. 2011) |
154
+| KLHL14 | 1 | (Zhang et al. 2013) |
155
+| KLHL21 | 2 | (Schmitz et al. 2018) |
156
+| KLHL6 | 1 | (Morin et al. 2011) |
157
+| KMT2C | 1 | (Zhang et al. 2013) |
158
+| KMT2D | 1 | (Morin et al. 2011) |
159
+| KRAS | 1 | (Lohr et al. 2012) |
160
+| LAMA5 | 2 | (Schmitz et al. 2018) |
161
+| LAPTM5 | 2 | (Hübschmann et al. 2021) |
162
+| LCOR | 1 | (Arthur et al. 2018) |
163
+| LIN54 | 2 | (Reddy et al. 2017) |
164
+| LPP | 2 | (Arthur et al. 2018) |
165
+| LRP12 | 2 | (Hübschmann et al. 2021) |
166
+| LRRN3 | 2 | (Morin et al. 2013) |
167
+| LTB | 1 | (Chapuy et al. 2018) |
168
+| LYN | 1 | (Chapuy et al. 2018) |
169
+| MAGT1 | 2 | (Reddy et al. 2017) |
170
+| MALAT1 | 2 | (Arthur et al. 2018) |
171
+| MAP2K1 | 2 | (Shin et al. 2015; Louissaint et al. 2016) |
172
+| MAP4K4 | 2 | (Reddy et al. 2017) |
173
+| MARK1 | 2 | (Reddy et al. 2017) |
174
+| MCL1 | 1 | (Reddy et al. 2017) |
175
+| MECOM | 2 | (Reddy et al. 2017) |
176
+| MEF2B | 1 | (Morin et al. 2011) |
177
+| MEF2C | 1 | (Arthur et al. 2018) |
178
+| MET | 2 | (Reddy et al. 2017) |
179
+| MGA | 1 | (Zhang et al. 2013) |
180
+| MIR142 | 2 | (Kwanhian et al. 2012) |
181
+| MIR155HG | 2 | \] |
182
+| MPDZ | 2 | (Morin et al. 2013) |
183
+| MPEG1 | 1 | (Morin et al. 2013) |
184
+| MS4A1 | 1 | (Rushton et al. 2020) |
185
+| MSH2 | 2 | (Reddy et al. 2017) |
186
+| MSH6 | 2 | (Reddy et al. 2017) |
187
+| MTOR | 1 | (Zhang et al. 2013) |
188
+| MYB | 2 | (Reddy et al. 2017) |
189
+| MYBPC2 | 2 | (Schmitz et al. 2018) |
190
+| MYC | 1 | (L. Pasqualucci et al. 2001) |
191
+| MYD88 | 1 | (Ngo et al. 2011) |
192
+| MYO1E | 2 | \] |
193
+| MYOM2 | 1 | (Laura Pasqualucci, Trifonov, et al. 2011) |
194
+| N2RF2 | 2 | (Hübschmann et al. 2021) |
195
+| NANOG | 2 | (Chapuy et al. 2018) |
196
+| NAV1 | 2 | (Chapuy et al. 2018) |
197
+| NCOA3 | 2 | \] |
198
+| NCOR1 | 2 | (Reddy et al. 2017) |
199
+| NCOR2 | 1 | \] |
200
+| NEAT1 | 2 | (Arthur et al. 2018) |
201
+| NF1 | 2 | (Reddy et al. 2017) |
202
+| NFKB1 | 1 | \] |
203
+| NFKB2 | 2 | (Reddy et al. 2017) |
204
+| NFKBIA | 1 | (Lake et al. 2009; Russler-Germain et al. 2023) |
205
+| NFKBIE | 1 | (Morin et al. 2016) |
206
+| NFKBIZ | 1 | (Morin et al. 2016) |
207
+| NLRC5 | 1 | \] |
208
+| NLRP5 | 2 | (Morin et al. 2013) |
209
+| NLRP8 | 2 | (Chapuy et al. 2018) |
210
+| NOL9 | 1 | (Schmitz et al. 2018) |
211
+| NOTCH1 | 1 | (Laura Pasqualucci, Trifonov, et al. 2011) |
212
+| NOTCH2 | 1 | (Trøen et al. 2008) |
213
+| ODZ3 | 2 | (Morin et al. 2013) |
214
+| OSBPL10 | 1 | (Arthur et al. 2018) |
215
+| P2RX5 | 2 | (Morin et al. 2013) |
216
+| P2RY8 | 1 | (Lohr et al. 2012) |
217
+| PAPOLG | 2 | (Schmitz et al. 2018) |
218
+| PASK | 2 | (Morin et al. 2013) |
219
+| PAX5 | 2 | (L. Pasqualucci et al. 2001) |
220
+| PCBP1 | 1 | \] |
221
+| PCDHB11 | 2 | (Morin et al. 2013) |
222
+| PCLO | 2 | (Lohr et al. 2012) |
223
+| PDE4DIP | 2 | (Chapuy et al. 2018) |
224
+| PDS5B | 2 | (Morin et al. 2013; Hübschmann et al. 2021) |
225
+| PHF6 | 2 | (Reddy et al. 2017) |
226
+| PIK3CD | 2 | (Reddy et al. 2017) |
227
+| PIK3R1 | 2 | (Zhang et al. 2013) |
228
+| PIM1 | 1 | (L. Pasqualucci et al. 2001) |
229
+| PIM2 | 1 | (Arthur et al. 2018) |
230
+| PKD1 | 2 | (Morin et al. 2013) |
231
+| PNPO | 2 | (Hübschmann et al. 2021) |
232
+| POGZ | 2 | (Morin et al. 2013) |
233
+| POU2AF1 | 1 | (Krysiak et al. 2017) |
234
+| POU2F2 | 1 | (Zhang et al. 2013; Krysiak et al. 2017) |
235
+| PPP1R9B | 2 | \] |
236
+| PRDM1 | 1 | (**pasqualucciInactivationPRDM1BLIMP12006?**) |
237
+| PRKCB | 2 | (Morin et al. 2013) |
238
+| PRKDC | 1 | (Schmitz et al. 2018; Hübschmann et al. 2021) |
239
+| PRPS1 | 2 | (Chapuy et al. 2018) |
240
+| PTEN | 1 | \] |
241
+| PTMA | 2 | \] |
242
+| PTPN1 | 2 | \] |
243
+| PTPN23 | 2 | (Morin et al. 2013) |
244
+| PTPN6 | 2 | (Reddy et al. 2017) |
245
+| PTPRD | 1 | \] |
246
+| PTPRK | 2 | (Reddy et al. 2017) |
247
+| RAC2 | 2 | (Hübschmann et al. 2021) |
248
+| RAD9A | 2 | (Chapuy et al. 2018) |
249
+| RARA | 2 | (Reddy et al. 2017) |
250
+| RB1 | 1 | (Morin et al. 2013) |
251
+| RCC | 2 | \] |
252
+| RFTN1 | 2 | (Arthur et al. 2018) |
253
+| RFX7 | 1 | \] |
254
+| RFXAP | 1 | \] |
255
+| RHEX | 2 | \] |
256
+| RHOA | 1 | (L. Pasqualucci et al. 2001) |
257
+| RHOH | 2 | \] |
258
+| RRAGC | 1 | (Okosun et al. 2016) |
259
+| RUBCNL | 2 | \] |
260
+| RUNX1 | 2 | (Reddy et al. 2017) |
261
+| S1PR2 | 1 | (Morin et al. 2011) |
262
+| SAMD9L | 2 | (Morin et al. 2013) |
263
+| SARM1 | 2 | (Morin et al. 2013) |
264
+| SEL1L3 | 2 | \] |
265
+| SEPTIN9 | 2 | \] |
266
+| SERPINA9 | 2 | (Arthur et al. 2018) |
267
+| SETD1B | 1 | (Reddy et al. 2017) |
268
+| SETD2 | 2 | (Zhang et al. 2013) |
269
+| SETD5 | 2 | (Reddy et al. 2017) |
270
+| SF3B1 | 1 | \] |
271
+| SGK1 | 1 | (Morin et al. 2011) |
272
+| SIAH2 | 2 | (Hübschmann et al. 2021) |
273
+| SIN3A | 1 | \] |
274
+| SLC34A2 | 2 | (Hübschmann et al. 2021) |
275
+| SMARCA4 | 1 | (Zhang et al. 2013; Krysiak et al. 2017) |
276
+| SMEK1 | 2 | (Chapuy et al. 2018) |
277
+| SOCS1 | 1 | (Morin et al. 2011) |
278
+| SPEN | 1 | (Rossi et al. 2012) |
279
+| SRRM2 | 2 | (Morin et al. 2013; Russler-Germain et al. 2023) |
280
+| ST6GAL1 | 2 | (Arthur et al. 2018) |
281
+| STAT3 | 1 | (Ohgami et al. 2014) |
282
+| STAT5B | 2 | (Zhang et al. 2013) |
283
+| STAT6 | 1 | (Yildiz et al. 2015) |
284
+| SYK | 2 | (Reddy et al. 2017) |
285
+| SYPL1 | 2 | (Morin et al. 2013) |
286
+| TAF1 | 1 | (Morin et al. 2013) |
287
+| TAP1 | 2 | (Schmitz et al. 2018) |
288
+| TBC1D4 | 2 | (Arthur et al. 2018) |
289
+| TBL1XR1 | 1 | (Mareschal et al. 2016) |
290
+| TCL1A | 2 | \] |
291
+| TET2 | 1 | (Albuquerque et al. 2017) |
292
+| TGFBR2 | 2 | (Reddy et al. 2017) |
293
+| TIPARP | 2 | (Reddy et al. 2017) |
294
+| TLR2 | 2 | (Chapuy et al. 2018) |
295
+| TMEM30A | 1 | (Morin et al. 2011) |
296
+| TMSB4X | 1 | (Albuquerque et al. 2017) |
297
+| TNFAIP3 | 1 | (Compagno et al. 2009) |
298
+| TNFRSF14 | 1 | (Cheung et al. 2010) |
299
+| TOX | 1 | (Reddy et al. 2017) |
300
+| TP53 | 1 | (Morin et al. 2011) |
301
+| TRAF3 | 2 | (Laura Pasqualucci, Trifonov, et al. 2011) |
302
+| TRAF6 | 2 | (Hübschmann et al. 2021) |
303
+| TRIP12 | 1 | \] |
304
+| TRRAP | 1 | (Parry et al. 2013) |
305
+| UBE2A | 1 | (Reddy et al. 2017) |
306
+| UBE2J1 | 2 | \] |
307
+| UBR5 | 2 | (Zhang et al. 2013) |
308
+| UNC5B | 2 | (Hübschmann et al. 2021) |
309
+| UNC5C | 1 | \] |
310
+| UNC5D | 2 | \] |
311
+| USP7 | 1 | \] |
312
+| VPS13B | 1 | \] |
313
+| WAC | 2 | (Reddy et al. 2017) |
314
+| WDFY3 | 2 | (Morin et al. 2013) |
315
+| WEE1 | 1 | (Schmitz et al. 2018) |
316
+| WNK1 | 2 | (Hübschmann et al. 2021) |
317
+| XBP1 | 2 | \] |
318
+| XPO1 | 1 | (Mareschal et al. 2016) |
319
+| YY1 | 2 | (Reddy et al. 2017) |
320
+| ZBTB7A | 2 | (Reddy et al. 2017) |
321
+| ZC3H12A | 1 | (Arthur et al. 2018) |
322
+| ZCCHC7 | 2 | (Arthur et al. 2018) |
323
+| ZEB2 | 2 | (Zhang et al. 2013) |
324
+| ZFAT | 2 | (Reddy et al. 2017) |
325
+| ZFP36L1 | 1 | (Morin et al. 2011) |
326
+| ZFX | 2 | (Reddy et al. 2017) |
327
+| ZNF217 | 2 | (Hübschmann et al. 2021) |
328
+| ZNF292 | 1 | (Zhang et al. 2013) |
329
+| ZNF423 | 2 | (Chapuy et al. 2018) |
330
+| ZNF608 | 1 | (Zhang et al. 2013; Krysiak et al. 2017) |
331 331
332 332
# References
333 333
FL_genes_with_bib.md
... ...
@@ -1,123 +1,123 @@
1 1
# FL genes
2 2
3
-| Gene | Tier | FL Reference | Other references |
4
-|:---------:|:----:|:------------------------------------------------:|:------------------------------------------:|
5
-| ABL2 | 2 | (Russler-Germain et al. 2023) | |
6
-| ACTB | 1 | | (Lohr et al. 2012) |
7
-| ACTG1 | 2 | (Hübschmann et al. 2021) | |
8
-| ARID1A | 1 | (Krysiak et al. 2017) | (Zhang et al. 2013) |
9
-| ATP6AP1 | 1 | (Okosun et al. 2016) | |
10
-| ATP6V1A | 2 | (Hübschmann et al. 2021) | |
11
-| ATP6V1B2 | 1 | (Okosun et al. 2016) | |
12
-| B2M | 1 | (Morin et al. 2011) | |
13
-| BCL10 | 2 | (Russler-Germain et al. 2023) | (Morin et al. 2011) |
14
-| BCL2 | 1 | (Morin et al. 2011) | (Tanaka et al. 1992) |
15
-| BCL6 | 1 | | (Morin et al. 2011) |
16
-| BCL7A | 1 | (Krysiak et al. 2017) | (Arthur et al. 2018) |
17
-| BIRC6 | 1 | | (Reddy et al. 2017) |
18
-| BTG1 | 1 | | (Morin et al. 2011) |
19
-| BTG2 | 1 | (Morin et al. 2011) | |
20
-| BTK | 1 | (Krysiak et al. 2017) | (Albuquerque et al. 2017) |
21
-| CARD11 | 1 | (Morin et al. 2011) | (Lenz et al. 2008) |
22
-| CCDC42BPB | 2 | (Hübschmann et al. 2021) | |
23
-| CCND3 | 1 | (Morin et al. 2011) | |
24
-| CD70 | 2 | (Russler-Germain et al. 2023) | (Morin et al. 2011) |
25
-| CD79B | 2 | | (Morin et al. 2011) |
26
-| CD83 | 1 | (Russler-Germain et al. 2023) | (Morin et al. 2013) |
27
-| CILP | 2 | (Russler-Germain et al. 2023) | |
28
-| CPNE8 | 2 | (Hübschmann et al. 2021) | |
29
-| CREBBP | 1 | (Laura Pasqualucci, Dominguez-Sola, et al. 2011) | |
30
-| CTSS | 1 | (Bararia et al. 2020) | |
31
-| CXCR4 | 2 | (Krysiak et al. 2017) | (Khodabakhshi et al. 2012) |
32
-| CYP2A6 | 2 | (Russler-Germain et al. 2023) | |
33
-| DDX3X | 2 | | (Schmitz et al. 2018) |
34
-| DHX15 | 2 | (Hübschmann et al. 2021) | |
35
-| DTX1 | 1 | | (Schmitz et al. 2018) |
36
-| DUSP2 | 2 | | (Morin et al. 2013) |
37
-| EBF1 | 1 | | (Bohle et al. 2013) |
38
-| EEF1A1 | 1 | (Hübschmann et al. 2021) | |
39
-| EGR1 | 2 | (Krysiak et al. 2017) | |
40
-| EP300 | 1 | (Laura Pasqualucci, Dominguez-Sola, et al. 2011) | |
41
-| EZH2 | 1 | (Morin et al. 2010) | |
42
-| FAS | 1 | | (Scholl et al. 2007) |
43
-| FOXO1 | 1 | (Morin et al. 2011) | |
44
-| FZR1 | 2 | (Hübschmann et al. 2021) | |
45
-| GBP7 | 2 | (Russler-Germain et al. 2023) | |
46
-| GNA13 | 1 | (Morin et al. 2011) | |
47
-| GNAI2 | 1 | | (Morin et al. 2013) |
48
-| GRM6 | 2 | (Russler-Germain et al. 2023) | |
49
-| HIST1H1B | 1 | (Krysiak et al. 2017) | (Chapuy et al. 2018) |
50
-| HIST1H1C | 1 | (Morin et al. 2011) | |
51
-| HIST1H1D | 1 | (Krysiak et al. 2017) | (Morin et al. 2013) |
52
-| HIST1H1E | 1 | (Krysiak et al. 2017) | (Morin et al. 2013) |
53
-| HIST1H2AC | 1 | (Krysiak et al. 2017) | (Morin et al. 2013) |
54
-| HIST1H2AG | 1 | (Krysiak et al. 2017) | (Morin et al. 2013) |
55
-| HIST1H2AM | 1 | (Krysiak et al. 2017) | |
56
-| HIST1H2BC | 1 | (Krysiak et al. 2017) | (Reddy et al. 2017) |
57
-| HIST1H2BD | 1 | (Krysiak et al. 2017) | |
58
-| HIST1H2BG | 1 | (Krysiak et al. 2017) | |
59
-| HIST1H2BM | 2 | (Krysiak et al. 2017) | |
60
-| HIST1H3B | 1 | | (Zhang et al. 2013) |
61
-| HIST1H3G | 1 | (Krysiak et al. 2017) | |
62
-| HIST1H3I | 2 | (Krysiak et al. 2017) | |
63
-| HLA-B | 2 | | |
64
-| HNRNPD | 2 | | |
65
-| HVCN1 | 1 | (Krysiak et al. 2017) | |
66
-| IGLL5 | 2 | (Russler-Germain et al. 2023) | |
67
-| IRF4 | 1 | | (Morin et al. 2011) |
68
-| IRF8 | 1 | (Morin et al. 2011) | |
69
-| ITPKB | 1 | | (Schmitz et al. 2018) |
70
-| JUP | 2 | (Hübschmann et al. 2021) | |
71
-| KIR3DL1 | 2 | (Russler-Germain et al. 2023) | |
72
-| KLF2 | 1 | | (Laura Pasqualucci, Trifonov, et al. 2011) |
73
-| KLHL6 | 1 | (Morin et al. 2011) | |
74
-| KMT2D | 1 | (Morin et al. 2011) | |
75
-| LAPTM5 | 2 | (Hübschmann et al. 2021) | |
76
-| LTB | 1 | | (Chapuy et al. 2018) |
77
-| MAGEC1 | 2 | (Russler-Germain et al. 2023) | |
78
-| MAP2K1 | 1 | (Louissaint et al. 2016) | (Shin et al. 2015) |
79
-| MAP7D1 | 2 | (Russler-Germain et al. 2023) | |
80
-| MEF2B | 1 | (Morin et al. 2011) | |
81
-| MEF2C | 1 | | (Arthur et al. 2018) |
82
-| MGEA5 | 2 | (Hübschmann et al. 2021) | |
83
-| MKI67 | 2 | (Russler-Germain et al. 2023) | |
84
-| MYC | 2 | | (L. Pasqualucci et al. 2001) |
85
-| MYCBP2 | 2 | (Hübschmann et al. 2021) | |
86
-| MYD88 | 2 | | (Ngo et al. 2011) |
87
-| NFKBIA | 2 | (Russler-Germain et al. 2023) | (Lake et al. 2009) |
88
-| OR8H2 | 2 | (Russler-Germain et al. 2023) | |
89
-| P2RY8 | 2 | | (Lohr et al. 2012) |
90
-| PCLO | 1 | | (Lohr et al. 2012) |
91
-| PDS5B | 2 | (Hübschmann et al. 2021) | (Morin et al. 2013) |
92
-| PIM1 | 1 | | (L. Pasqualucci et al. 2001) |
93
-| POU2AF1 | 1 | (Krysiak et al. 2017) | |
94
-| POU2F2 | 1 | (Krysiak et al. 2017) | (Zhang et al. 2013) |
95
-| PPP4C | 2 | (Hübschmann et al. 2021) | |
96
-| PRKDC | 2 | (Hübschmann et al. 2021) | (Schmitz et al. 2018) |
97
-| PTPRD | 1 | | |
98
-| PZP | 2 | (Russler-Germain et al. 2023) | |
99
-| RBM6 | 2 | (Hübschmann et al. 2021) | |
100
-| RRAGC | 1 | | (Okosun et al. 2016) |
101
-| S1PR2 | 1 | | (Morin et al. 2011) |
102
-| SESN1 | 2 | (Oricchio et al. 2017) | |
103
-| SGK1 | 1 | (Morin et al. 2011) | |
104
-| SHROOM3 | 2 | (Russler-Germain et al. 2023) | |
105
-| SMARCA4 | 1 | (Krysiak et al. 2017) | (Zhang et al. 2013) |
106
-| SOCS1 | 1 | | (Morin et al. 2011) |
107
-| SRRM2 | 2 | (Russler-Germain et al. 2023) | (Morin et al. 2013) |
108
-| STAB2 | 2 | (Russler-Germain et al. 2023) | |
109
-| STAT6 | 1 | (Yildiz et al. 2015) | |
110
-| TBL1XR1 | 1 | | (Mareschal et al. 2016) |
111
-| TMEM30A | 2 | (Morin et al. 2011) | |
112
-| TMSB4X | 1 | | (Albuquerque et al. 2017) |
113
-| TNFAIP3 | 1 | | (Compagno et al. 2009) |
114
-| TNFRSF14 | 1 | (Cheung et al. 2010) | |
115
-| TP53 | 1 | (Morin et al. 2011) | |
116
-| TPP1 | 2 | (Hübschmann et al. 2021) | |
117
-| VMA21 | 1 | (Hübschmann et al. 2021) | |
118
-| XIRP2 | 2 | (Russler-Germain et al. 2023) | |
119
-| ZC3H12A | 2 | | (Arthur et al. 2018) |
120
-| ZNF608 | 2 | (Krysiak et al. 2017) | (Zhang et al. 2013) |
3
+| Gene | Tier | FL Relevant references |
4
+|:---------:|:----:|:------------------------------------------------:|
5
+| ABL2 | 2 | (Russler-Germain et al. 2023) |
6
+| ACTB | 1 | (Lohr et al. 2012) |
7
+| ACTG1 | 2 | (Hübschmann et al. 2021) |
8
+| ARID1A | 1 | (Krysiak et al. 2017; Zhang et al. 2013) |
9
+| ATP6AP1 | 1 | (Okosun et al. 2016) |
10
+| ATP6V1A | 2 | (Hübschmann et al. 2021) |
11
+| ATP6V1B2 | 1 | (Okosun et al. 2016) |
12
+| B2M | 1 | (Morin et al. 2011) |
13
+| BCL10 | 2 | (Russler-Germain et al. 2023; Morin et al. 2011) |
14
+| BCL2 | 1 | (Morin et al. 2011; Tanaka et al. 1992) |
15
+| BCL6 | 1 | (Morin et al. 2011) |
16
+| BCL7A | 1 | (Krysiak et al. 2017; Arthur et al. 2018) |
17
+| BIRC6 | 1 | (Reddy et al. 2017) |
18
+| BTG1 | 1 | (Morin et al. 2011) |
19
+| BTG2 | 1 | (Morin et al. 2011) |
20
+| BTK | 1 | (Krysiak et al. 2017; Albuquerque et al. 2017) |
21
+| CARD11 | 1 | (Morin et al. 2011; Lenz et al. 2008) |
22
+| CCDC42BPB | 2 | (Hübschmann et al. 2021) |
23
+| CCND3 | 1 | (Morin et al. 2011) |
24
+| CD70 | 2 | (Russler-Germain et al. 2023; Morin et al. 2011) |
25
+| CD79B | 2 | (Morin et al. 2011) |
26
+| CD83 | 1 | (Russler-Germain et al. 2023; Morin et al. 2013) |
27
+| CILP | 2 | (Russler-Germain et al. 2023) |
28
+| CPNE8 | 2 | (Hübschmann et al. 2021) |
29
+| CREBBP | 1 | (Laura Pasqualucci, Dominguez-Sola, et al. 2011) |
30
+| CTSS | 1 | (Bararia et al. 2020) |
31
+| CXCR4 | 2 | (Krysiak et al. 2017; Khodabakhshi et al. 2012) |
32
+| CYP2A6 | 2 | (Russler-Germain et al. 2023) |
33
+| DDX3X | 2 | (Schmitz et al. 2018) |
34
+| DHX15 | 2 | (Hübschmann et al. 2021) |
35
+| DTX1 | 1 | (Schmitz et al. 2018) |
36
+| DUSP2 | 2 | (Morin et al. 2013) |
37
+| EBF1 | 1 | (Bohle et al. 2013) |
38
+| EEF1A1 | 1 | (Hübschmann et al. 2021) |
39
+| EGR1 | 2 | (Krysiak et al. 2017) |
40
+| EP300 | 1 | (Laura Pasqualucci, Dominguez-Sola, et al. 2011) |
41
+| EZH2 | 1 | (Morin et al. 2010) |
42
+| FAS | 1 | (Scholl et al. 2007) |
43
+| FOXO1 | 1 | (Morin et al. 2011) |
44
+| FZR1 | 2 | (Hübschmann et al. 2021) |
45
+| GBP7 | 2 | (Russler-Germain et al. 2023) |
46
+| GNA13 | 1 | (Morin et al. 2011) |
47
+| GNAI2 | 1 | (Morin et al. 2013) |
48
+| GRM6 | 2 | (Russler-Germain et al. 2023) |
49
+| HIST1H1B | 1 | (Krysiak et al. 2017; Chapuy et al. 2018) |
50
+| HIST1H1C | 1 | (Morin et al. 2011) |
51
+| HIST1H1D | 1 | (Krysiak et al. 2017; Morin et al. 2013) |
52
+| HIST1H1E | 1 | (Krysiak et al. 2017; Morin et al. 2013) |
53
+| HIST1H2AC | 1 | (Krysiak et al. 2017; Morin et al. 2013) |
54
+| HIST1H2AG | 1 | (Krysiak et al. 2017; Morin et al. 2013) |
55
+| HIST1H2AM | 1 | (Krysiak et al. 2017) |
56
+| HIST1H2BC | 1 | (Krysiak et al. 2017; Reddy et al. 2017) |
57
+| HIST1H2BD | 1 | (Krysiak et al. 2017) |
58
+| HIST1H2BG | 1 | (Krysiak et al. 2017) |
59
+| HIST1H2BM | 2 | (Krysiak et al. 2017) |
60
+| HIST1H3B | 1 | (Zhang et al. 2013) |
61
+| HIST1H3G | 1 | (Krysiak et al. 2017) |
62
+| HIST1H3I | 2 | (Krysiak et al. 2017) |
63
+| HLA-B | 2 | \] |
64
+| HNRNPD | 2 | \] |
65
+| HVCN1 | 1 | (Krysiak et al. 2017) |
66
+| IGLL5 | 2 | (Russler-Germain et al. 2023) |
67
+| IRF4 | 1 | (Morin et al. 2011) |
68
+| IRF8 | 1 | (Morin et al. 2011) |
69
+| ITPKB | 1 | (Schmitz et al. 2018) |
70
+| JUP | 2 | (Hübschmann et al. 2021) |
71
+| KIR3DL1 | 2 | (Russler-Germain et al. 2023) |
72
+| KLF2 | 1 | (Laura Pasqualucci, Trifonov, et al. 2011) |
73
+| KLHL6 | 1 | (Morin et al. 2011) |
74
+| KMT2D | 1 | (Morin et al. 2011) |
75
+| LAPTM5 | 2 | (Hübschmann et al. 2021) |
76
+| LTB | 1 | (Chapuy et al. 2018) |
77
+| MAGEC1 | 2 | (Russler-Germain et al. 2023) |
78
+| MAP2K1 | 1 | (Louissaint et al. 2016; Shin et al. 2015) |
79
+| MAP7D1 | 2 | (Russler-Germain et al. 2023) |
80
+| MEF2B | 1 | (Morin et al. 2011) |
81
+| MEF2C | 1 | (Arthur et al. 2018) |
82
+| MGEA5 | 2 | (Hübschmann et al. 2021) |
83
+| MKI67 | 2 | (Russler-Germain et al. 2023) |
84
+| MYC | 2 | (L. Pasqualucci et al. 2001) |
85
+| MYCBP2 | 2 | (Hübschmann et al. 2021) |
86
+| MYD88 | 2 | (Ngo et al. 2011) |
87
+| NFKBIA | 2 | (Russler-Germain et al. 2023; Lake et al. 2009) |
88
+| OR8H2 | 2 | (Russler-Germain et al. 2023) |
89
+| P2RY8 | 2 | (Lohr et al. 2012) |
90
+| PCLO | 1 | (Lohr et al. 2012) |
91
+| PDS5B | 2 | (Hübschmann et al. 2021; Morin et al. 2013) |
92
+| PIM1 | 1 | (L. Pasqualucci et al. 2001) |
93
+| POU2AF1 | 1 | (Krysiak et al. 2017) |
94
+| POU2F2 | 1 | (Krysiak et al. 2017; Zhang et al. 2013) |
95
+| PPP4C | 2 | (Hübschmann et al. 2021) |
96
+| PRKDC | 2 | (Hübschmann et al. 2021; Schmitz et al. 2018) |
97
+| PTPRD | 1 | \] |
98
+| PZP | 2 | (Russler-Germain et al. 2023) |
99
+| RBM6 | 2 | (Hübschmann et al. 2021) |
100
+| RRAGC | 1 | (Okosun et al. 2016) |
101
+| S1PR2 | 1 | (Morin et al. 2011) |
102
+| SESN1 | 2 | (Oricchio et al. 2017) |
103
+| SGK1 | 1 | (Morin et al. 2011) |
104
+| SHROOM3 | 2 | (Russler-Germain et al. 2023) |
105
+| SMARCA4 | 1 | (Krysiak et al. 2017; Zhang et al. 2013) |
106
+| SOCS1 | 1 | (Morin et al. 2011) |
107
+| SRRM2 | 2 | (Russler-Germain et al. 2023; Morin et al. 2013) |
108
+| STAB2 | 2 | (Russler-Germain et al. 2023) |
109
+| STAT6 | 1 | (Yildiz et al. 2015) |
110
+| TBL1XR1 | 1 | (Mareschal et al. 2016) |
111
+| TMEM30A | 2 | (Morin et al. 2011) |
112
+| TMSB4X | 1 | (Albuquerque et al. 2017) |
113
+| TNFAIP3 | 1 | (Compagno et al. 2009) |
114
+| TNFRSF14 | 1 | (Cheung et al. 2010) |
115
+| TP53 | 1 | (Morin et al. 2011) |
116
+| TPP1 | 2 | (Hübschmann et al. 2021) |
117
+| VMA21 | 1 | (Hübschmann et al. 2021) |
118
+| XIRP2 | 2 | (Russler-Germain et al. 2023) |
119
+| ZC3H12A | 2 | (Arthur et al. 2018) |
120
+| ZNF608 | 2 | (Krysiak et al. 2017; Zhang et al. 2013) |
121 121
122 122
# References
123 123