145528ea3a93153c091e315fc90852d1bda2feaa
GRB2.md
| ... | ... | @@ -4,28 +4,28 @@ |
| 4 | 4 | |
| 5 | 5 | |Entity|Tier|Description | |
| 6 | 6 | |:------:|:----:|--------------------------------------| |
| 7 | -|BL |2 |relevance in BL not firmly established| |
|
| 8 | 7 | |DLBCL |1 |high-confidence DLBCL gene | |
| 8 | +|BL |2 |relevance in BL seems unlikely| |
|
| 9 | 9 | |
| 10 | 10 | ## Mutation incidence in large patient cohorts (GAMBL reanalysis) |
| 11 | 11 | |
| 12 | 12 | |Entity|source |frequency (%)| |
| 13 | 13 | |:------:|:---------------------:|:-------------:| |
| 14 | -|BL |GAMBL genomes+capture|0.46 | |
|
| 15 | -|BL |Thomas cohort |0.40 | |
|
| 16 | -|BL |Panea cohort |1.00 | |
|
| 17 | 14 | |DLBCL |GAMBL genomes |3.25 | |
| 18 | 15 | |DLBCL |Schmitz cohort |2.77 | |
| 19 | 16 | |DLBCL |Reddy cohort |1.50 | |
| 20 | 17 | |DLBCL |Chapuy cohort |2.99 | |
| 18 | +|BL |GAMBL genomes+capture|0.46 | |
|
| 19 | +|BL |Thomas cohort |0.40 | |
|
| 20 | +|BL |Panea cohort |1.00 | |
|
| 21 | 21 | |
| 22 | 22 | ## Mutation pattern and selective pressure estimates |
| 23 | 23 | |
| 24 | 24 | |Entity|aSHM|Significant selection|dN/dS (missense)|dN/dS (nonsense)| |
| 25 | 25 | |:------:|:----:|:---------------------:|:----------------:|:----------------:| |
| 26 | -|BL |No |No | 7.253 | 0.000 | |
|
| 27 | 26 | |DLBCL |No |Yes |33.029 |168.982 | |
| 28 | 27 | |FL |No |No | 8.575 | 0.000 | |
| 28 | +|BL |No |No | 7.253 | 0.000 | |
|
| 29 | 29 | |
| 30 | 30 | |
| 31 | 31 | > [!NOTE] |