Changes in 14e4329: clean up

				DLBCL_genes.md
			
          @@ -187,12 +187,10 @@ link-citations: true

           |[EIF2AK3](EIF2AK3)|2, aSHM|||

           |[EZR](EZR)|2, aSHM||[@deschGenotypingCirculatingTumor2020]|

           |[FAM102A](FAM102A)|2, aSHM|||

          -|[FAM38B](FAM38B)|2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]||

           |[FANK1](FANK1)|2, aSHM|||

           |[FAT4](FAT4)|2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|[@parryWholeExomeSequencing2013; @zhangGenomicLandscapeMantle2014]|

           |[FCRL3](FCRL3)|2, aSHM|||

           |[FNBP1](FNBP1)|2, aSHM|||

          -|[FNDC1](FNDC1)|2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]||

           |[FOXC1](FOXC1)|2|[Schmitz et al](papers/schmitzGeneticsPathogenesisDiffuse2018a)[@schmitzGeneticsPathogenesisDiffuse2018a]||

           |[FOXP1](FOXP1)|2, aSHM|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]||

           |[FUBP1](FUBP1)|2|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]||

          @@ -211,7 +209,6 @@ link-citations: true

           |[HNF1B](HNF1B)|2|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)[@pasqualucciAnalysisCodingGenome2011]||

           |[HNRNPH1](HNRNPH1)|2, noncoding|[Pararajalingam et al](papers/pararajalingamCodingNoncodingDrivers2020)[@pararajalingamCodingNoncodingDrivers2020]||

           |[ID3](ID3)|2|[Schmitz et al](papers/schmitzBurkittLymphomaPathogenesis2012)[@schmitzBurkittLymphomaPathogenesis2012]|[@spinaGeneticsNodalMarginal2016b; @richterRecurrentMutationID32012a]|

          -|[IER2](IER2)|2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]||

           |[IFNGR1](IFNGR1)|2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]||

           |[IGLL5](IGLL5)|2, aSHM||[@paneaWholeGenomeLandscape2019; @deschGenotypingCirculatingTumor2020; @russler-germainMutationsAssociatedProgression2023b]|

           |[IKBKB](IKBKB)|2|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|[@wienandGenomicAnalysesFlowsorted2019b; @rossiAlterationBIRC3Multiple2011a]|

          @@ -270,16 +267,13 @@ link-citations: true

           |[PDGFC](PDGFC)|2|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]||

           |[PDS5B](PDS5B)|2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|[@hubschmannMutationalMechanismsShaping2021b]|

           |[PIK3R1](PIK3R1)|2|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)[@zhangGeneticHeterogeneityDiffuse2013]|[@paneaWholeGenomeLandscape2019]|

          -|[PKD1](PKD1)|2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]||

           |[PNPO](PNPO)|2|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]||

          -|[POGZ](POGZ)|2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]||

           |[PPP1R9B](PPP1R9B)|2|||

           |[PRKCB](PRKCB)|2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]||

           |[PRKDC](PRKDC)|2|[Schmitz et al](papers/schmitzGeneticsPathogenesisDiffuse2018a)[@schmitzGeneticsPathogenesisDiffuse2018a]|[@hubschmannMutationalMechanismsShaping2021b]|

           |[PRPS1](PRPS1)|2|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]||

           |[PTMA](PTMA)|2, aSHM|||

           |[PTPN1](PTPN1)|2, aSHM||[@gunawardanaRecurrentSomaticMutations2014c]|

          -|[PTPN23](PTPN23)|2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]||

           |[PTPN6](PTPN6)|2|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]||

           |[RAC2](RAC2)|2|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|[@paneaWholeGenomeLandscape2019]|

           |[RAD9A](RAD9A)|2|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]||

          @@ -291,7 +285,6 @@ link-citations: true

           |[RUBCNL](RUBCNL)|2, aSHM|||

           |[S1PR1](S1PR1)|2|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|[@pararajalingamCodingNoncodingDrivers2020]|

           |[SAMD9L](SAMD9L)|2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]||

          -|[SARM1](SARM1)|2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]||

           |[SEL1L3](SEL1L3)|2, aSHM|||

           |[SEPTIN9](SEPTIN9)|2, aSHM|||

           |[SERPINA9](SERPINA9)|2, aSHM|[Arthur et al](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]||

          @@ -364,6 +357,12 @@ link-citations: true

           |[WAC](WAC)|2-F|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|[@rossiCodingGenomeSplenic2012c]|

           |[ZBTB7A](ZBTB7A)|2-F|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|[@burkhardtClinicalRelevanceMolecular2022b]|

           |[ZFAT](ZFAT)|2-F|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]||

          -

          +|[FAM38B](FAM38B)|2-F|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]||

          +|[FNDC1](FNDC1)|2-F|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]||

          +|[IER2](IER2)|2-F|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]||

          +|[PKD1](PKD1)|2-F|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]||

          +|[POGZ](POGZ)|2-F|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]||

          +|[PTPN23](PTPN23)|2-F|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]||

          +|[SARM1](SARM1)|2-F|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]||

           # References

...	...	@@ -187,12 +187,10 @@ link-citations: true
187	187	\|[EIF2AK3](EIF2AK3)\|2, aSHM\|\|\|
188	188	\|[EZR](EZR)\|2, aSHM\|\|[@deschGenotypingCirculatingTumor2020]\|
189	189	\|[FAM102A](FAM102A)\|2, aSHM\|\|\|
190		-\|[FAM38B](FAM38B)\|2\|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]\|\|
191	190	\|[FANK1](FANK1)\|2, aSHM\|\|\|
192	191	\|[FAT4](FAT4)\|2\|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]\|[@parryWholeExomeSequencing2013; @zhangGenomicLandscapeMantle2014]\|
193	192	\|[FCRL3](FCRL3)\|2, aSHM\|\|\|
194	193	\|[FNBP1](FNBP1)\|2, aSHM\|\|\|
195		-\|[FNDC1](FNDC1)\|2\|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]\|\|
196	194	\|[FOXC1](FOXC1)\|2\|[Schmitz et al](papers/schmitzGeneticsPathogenesisDiffuse2018a)[@schmitzGeneticsPathogenesisDiffuse2018a]\|\|
197	195	\|[FOXP1](FOXP1)\|2, aSHM\|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]\|\|
198	196	\|[FUBP1](FUBP1)\|2\|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]\|\|
...	...	@@ -211,7 +209,6 @@ link-citations: true
211	209	\|[HNF1B](HNF1B)\|2\|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)[@pasqualucciAnalysisCodingGenome2011]\|\|
212	210	\|[HNRNPH1](HNRNPH1)\|2, noncoding\|[Pararajalingam et al](papers/pararajalingamCodingNoncodingDrivers2020)[@pararajalingamCodingNoncodingDrivers2020]\|\|
213	211	\|[ID3](ID3)\|2\|[Schmitz et al](papers/schmitzBurkittLymphomaPathogenesis2012)[@schmitzBurkittLymphomaPathogenesis2012]\|[@spinaGeneticsNodalMarginal2016b; @richterRecurrentMutationID32012a]\|
214		-\|[IER2](IER2)\|2\|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]\|\|
215	212	\|[IFNGR1](IFNGR1)\|2\|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]\|\|
216	213	\|[IGLL5](IGLL5)\|2, aSHM\|\|[@paneaWholeGenomeLandscape2019; @deschGenotypingCirculatingTumor2020; @russler-germainMutationsAssociatedProgression2023b]\|
217	214	\|[IKBKB](IKBKB)\|2\|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]\|[@wienandGenomicAnalysesFlowsorted2019b; @rossiAlterationBIRC3Multiple2011a]\|
...	...	@@ -270,16 +267,13 @@ link-citations: true
270	267	\|[PDGFC](PDGFC)\|2\|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]\|\|
271	268	\|[PDS5B](PDS5B)\|2\|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]\|[@hubschmannMutationalMechanismsShaping2021b]\|
272	269	\|[PIK3R1](PIK3R1)\|2\|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)[@zhangGeneticHeterogeneityDiffuse2013]\|[@paneaWholeGenomeLandscape2019]\|
273		-\|[PKD1](PKD1)\|2\|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]\|\|
274	270	\|[PNPO](PNPO)\|2\|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]\|\|
275		-\|[POGZ](POGZ)\|2\|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]\|\|
276	271	\|[PPP1R9B](PPP1R9B)\|2\|\|\|
277	272	\|[PRKCB](PRKCB)\|2\|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]\|\|
278	273	\|[PRKDC](PRKDC)\|2\|[Schmitz et al](papers/schmitzGeneticsPathogenesisDiffuse2018a)[@schmitzGeneticsPathogenesisDiffuse2018a]\|[@hubschmannMutationalMechanismsShaping2021b]\|
279	274	\|[PRPS1](PRPS1)\|2\|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]\|\|
280	275	\|[PTMA](PTMA)\|2, aSHM\|\|\|
281	276	\|[PTPN1](PTPN1)\|2, aSHM\|\|[@gunawardanaRecurrentSomaticMutations2014c]\|
282		-\|[PTPN23](PTPN23)\|2\|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]\|\|
283	277	\|[PTPN6](PTPN6)\|2\|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]\|\|
284	278	\|[RAC2](RAC2)\|2\|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]\|[@paneaWholeGenomeLandscape2019]\|
285	279	\|[RAD9A](RAD9A)\|2\|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]\|\|
...	...	@@ -291,7 +285,6 @@ link-citations: true
291	285	\|[RUBCNL](RUBCNL)\|2, aSHM\|\|\|
292	286	\|[S1PR1](S1PR1)\|2\|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]\|[@pararajalingamCodingNoncodingDrivers2020]\|
293	287	\|[SAMD9L](SAMD9L)\|2\|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]\|\|
294		-\|[SARM1](SARM1)\|2\|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]\|\|
295	288	\|[SEL1L3](SEL1L3)\|2, aSHM\|\|\|
296	289	\|[SEPTIN9](SEPTIN9)\|2, aSHM\|\|\|
297	290	\|[SERPINA9](SERPINA9)\|2, aSHM\|[Arthur et al](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]\|\|
...	...	@@ -364,6 +357,12 @@ link-citations: true
364	357	\|[WAC](WAC)\|2-F\|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]\|[@rossiCodingGenomeSplenic2012c]\|
365	358	\|[ZBTB7A](ZBTB7A)\|2-F\|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]\|[@burkhardtClinicalRelevanceMolecular2022b]\|
366	359	\|[ZFAT](ZFAT)\|2-F\|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]\|\|
367		-
	360	+\|[FAM38B](FAM38B)\|2-F\|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]\|\|
	361	+\|[FNDC1](FNDC1)\|2-F\|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]\|\|
	362	+\|[IER2](IER2)\|2-F\|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]\|\|
	363	+\|[PKD1](PKD1)\|2-F\|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]\|\|
	364	+\|[POGZ](POGZ)\|2-F\|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]\|\|
	365	+\|[PTPN23](PTPN23)\|2-F\|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]\|\|
	366	+\|[SARM1](SARM1)\|2-F\|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]\|\|
368	367
369	368	# References