2c586430137addda8257e533e3380c8745b14b26
ADNP.md
| ... | ... | @@ -2,23 +2,19 @@ |
| 2 | 2 | bibliography: 'morinlab.bib' |
| 3 | 3 | csl: 'NLM.csl' |
| 4 | 4 | link-citations: true |
| 5 | +nocite: | |
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| 6 | + @burkhardtClinicalRelevanceMolecular2022, |
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| 5 | 7 | --- |
| 6 | 8 | [[_TOC_]] |
| 7 | 9 | |
| 8 | 10 | |
| 9 | 11 | ## Relevance tier by entity |
| 10 | 12 | |
| 11 | -|Entity|Tier|Description | |
|
| 12 | -|:------:|:----:|--------------------------------------| |
|
| 13 | -| |2 |relevance in BL not firmly established[@burkhardtClinicalRelevanceMolecular2022]| |
|
| 13 | +[[include:table1_ADNP]] |
|
| 14 | 14 | |
| 15 | 15 | ## Mutation incidence in large patient cohorts (GAMBL reanalysis) |
| 16 | 16 | |
| 17 | -|Entity|source |frequency (%)| |
|
| 18 | -|:------:|:---------------------:|:-------------:| |
|
| 19 | -|BL |GAMBL genomes+capture|1.15 | |
|
| 20 | -|BL |Thomas cohort | NA | |
|
| 21 | -|BL |Panea cohort | NA | |
|
| 17 | +[[include:BL_ADNP.md]] |
|
| 22 | 18 | |
| 23 | 19 | ## Mutation pattern and selective pressure estimates |
| 24 | 20 |
AFAP1L2.md
| ... | ... | @@ -2,6 +2,8 @@ |
| 2 | 2 | bibliography: 'morinlab.bib' |
| 3 | 3 | csl: 'NLM.csl' |
| 4 | 4 | link-citations: true |
| 5 | +nocite: | |
|
| 6 | + @zhangGeneticHeterogeneityDiffuse2013, |
|
| 5 | 7 | --- |
| 6 | 8 | |
| 7 | 9 | [[_TOC_]] |
| ... | ... | @@ -11,13 +13,16 @@ link-citations: true |
| 11 | 13 | |
| 12 | 14 | ## Relevance tier by entity |
| 13 | 15 | |
| 14 | -|Entity|Tier|Description| |
|
| 15 | -|:------:|:----:|--------------------------------------| |
|
| 16 | -||3|relevance in DLBCL not firmly established[@zhangGeneticHeterogeneityDiffuse2013]| |
|
| 16 | +[[include:table1_AFAP1L2]] |
|
| 17 | 17 | |
| 18 | 18 | |
| 19 | +## Mutation incidence in large patient cohorts (GAMBL reanalysis) |
|
| 19 | 20 | |
| 21 | +[[include:DLBCL_AFAP1L2.md]] |
|
| 20 | 22 | |
| 23 | +## Mutation pattern and selective pressure estimates |
|
| 24 | + |
|
| 25 | +[[include:dnds_AFAP1L2.md]] |
|
| 21 | 26 | |
| 22 | 27 | [[include:mermaid_AFAP1L2.md]] |
| 23 | 28 |