2d1a600ac39e9675823f25324c181edc0d744b2a
HIST1H2AM.md
| ... | ... | @@ -23,24 +23,19 @@ This gene encodes the H2A protein, one of the core proteins comprising nucleosom |
| 23 | 23 | |
| 24 | 24 | ## Mutation incidence in large patient cohorts (GAMBL reanalysis) |
| 25 | 25 | |
| 26 | -|Entity|source |frequency (%)| |
|
| 27 | -|:------:|:---------------------:|:-------------:| |
|
| 28 | -|DLBCL |GAMBL genomes |5.93 | |
|
| 29 | -|DLBCL |Schmitz cohort |5.74 | |
|
| 30 | -|DLBCL |Reddy cohort |4.80 | |
|
| 31 | -|DLBCL |Chapuy cohort |5.98 | |
|
| 32 | -|FL |GAMBL genomes |3.70 | |
|
| 33 | -|BL |GAMBL genomes+capture|1.85 | |
|
| 34 | -|BL |Thomas cohort |1.70 | |
|
| 35 | -|BL |Panea cohort |3.00 | |
|
| 26 | +### DLBCL |
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| 27 | +[[include:DLBCL_HIST1H2AM.md]] |
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| 28 | + |
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| 29 | +### BL |
|
| 30 | +[[include:BL_HIST1H2AM.md]] |
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| 31 | + |
|
| 32 | +### FL |
|
| 33 | +[[include:FL_HIST1H2AM.md]] |
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| 34 | + |
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| 36 | 35 | |
| 37 | 36 | ## Mutation pattern and selective pressure estimates |
| 37 | +[[include:dnds_HIST1H2AM.md]] |
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| 38 | 38 | |
| 39 | -|Entity|aSHM|Significant selection|dN/dS (missense)|dN/dS (nonsense)| |
|
| 40 | -|:------:|:----:|:---------------------:|:----------------:|:----------------:| |
|
| 41 | -|DLBCL |No |No |1.844 |0 | |
|
| 42 | -|FL |No |No |1.845 |0 | |
|
| 43 | -|BL |No |No |2.149 |0 | |
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| 44 | 39 | |
| 45 | 40 | ## HIST1H2AM Hotspots |
| 46 | 41 |