DLBCL_sankey.md
... ...
@@ -6,65 +6,66 @@ config:
6 6
linkColor: target
7 7
width: 800
8 8
height: 1000
9
+ nodeAlignment: right
9 10
---
10 11
sankey-beta
11
-Pasqualucci 2001, DLBCL Tier 1, 2
12
-Pasqualucci 2001, DLBCL Tier 2, 2
13
-Morin 2011, DLBCL Tier 1, 24
14
-Morin 2011, DLBCL Tier 2, 1
15
-Morin 2016, DLBCL Tier 1, 2
16
-Chapuy 2018, DLBCL Tier 1, 2
17
-Chapuy 2018, DLBCL Tier 2, 17
18
-Mareschal 2016, DLBCL Tier 1, 2
19
-Reddy 2017, DLBCL Tier 1, 7
20
-Reddy 2017, DLBCL Tier 2, 53
21 12
Albuquerque 2017, DLBCL Tier 1, 3
13
+Morin 2016, DLBCL Tier 1, 2
22 14
Lohr 2012, DLBCL Tier 1, 3
23 15
Lohr 2012, DLBCL Tier 2, 1
24
-Pasqualucci 2011, DLBCL Tier 1, 2
25
-Hubschmann 2021, DLBCL Tier 1, 3
26
-Hubschmann 2021, DLBCL Tier 2, 20
16
+Arthur 2018, DLBCL Tier 1, 8
17
+Arthur 2018, DLBCL Tier 2, 12
18
+Mareschal 2016, DLBCL Tier 1, 2
19
+Zhang 2013, DLBCL Tier 1, 11
20
+Zhang 2013, DLBCL Tier 2, 8
27 21
Pararajalingam 2020, DLBCL Tier 2, 2
28 22
Morin 2013, DLBCL Tier 1, 11
29 23
Morin 2013, DLBCL Tier 2, 29
30
-Arthur 2018, DLBCL Tier 1, 8
31
-Arthur 2018, DLBCL Tier 2, 12
32 24
Schmitz 2018, DLBCL Tier 1, 7
33 25
Schmitz 2018, DLBCL Tier 2, 9
26
+Hubschmann 2021, DLBCL Tier 1, 3
27
+Hubschmann 2021, DLBCL Tier 2, 20
28
+Morin 2011, DLBCL Tier 1, 24
29
+Morin 2011, DLBCL Tier 2, 1
34 30
Pasqualucci 2011, DLBCL Tier 1, 3
35 31
Pasqualucci 2011, DLBCL Tier 2, 4
36
-Zhang 2013, DLBCL Tier 1, 11
37
-Zhang 2013, DLBCL Tier 2, 8
38
-DLBCL, exome, 7
39
-exome, pasqualucci 2011, 7
40
-DLBCL, exome, 19
41
-exome, zhang 2013, 19
42
-DLBCL, WGS, 40
43
-WGS, morin 2013, 40
44
-DLBCL, exome, 16
45
-exome, schmitz 2018, 16
46
-DLBCL, WGS, 20
47
-WGS, arthur 2018, 20
48
-DLBCL, WGS, 23
49
-WGS, hubschmann 2021, 23
50
-DLBCL, WGS/exome, 2
51
-WGS/exome, pararajalingam 2020, 2
32
+Chapuy 2018, DLBCL Tier 1, 2
33
+Chapuy 2018, DLBCL Tier 2, 17
34
+Reddy 2017, DLBCL Tier 1, 7
35
+Reddy 2017, DLBCL Tier 2, 53
36
+Pasqualucci 2001, DLBCL Tier 1, 2
37
+Pasqualucci 2001, DLBCL Tier 2, 2
38
+Pasqualucci 2011, DLBCL Tier 1, 2
52 39
DLBCL, exome, 2
53
-exome, pasqualucci 2011, 2
54
-DLBCL, exome, 4
55
-exome, lohr 2012, 4
40
+exome, Morin 2016, 2
56 41
DLBCL, exome, 3
57
-exome, albuquerque 2017, 3
58
-DLBCL, exome, 60
59
-exome, reddy 2017, 60
60
-DLBCL, exome, 2
61
-exome, mareschal 2016, 2
42
+exome, Albuquerque 2017, 3
43
+DLBCL, exome, 4
44
+exome, Lohr 2012, 4
45
+DLBCL, WGS/exome, 2
46
+WGS/exome, Pararajalingam 2020, 2
62 47
DLBCL, exome, 19
63
-exome, chapuy 2018, 19
48
+exome, Zhang 2013, 19
49
+DLBCL, WGS, 20
50
+WGS, Arthur 2018, 20
64 51
DLBCL, exome, 2
65
-exome, morin 2016, 2
52
+exome, Mareschal 2016, 2
53
+DLBCL, exome, 16
54
+exome, Schmitz 2018, 16
55
+DLBCL, WGS, 40
56
+WGS, Morin 2013, 40
66 57
DLBCL, RNA-seq/WGS, 25
67
-RNA-seq/WGS, morin 2011, 25
58
+RNA-seq/WGS, Morin 2011, 25
59
+DLBCL, WGS, 23
60
+WGS, Hubschmann 2021, 23
61
+DLBCL, exome, 7
62
+exome, Pasqualucci 2011, 7
68 63
DLBCL, Sanger, 4
69
-Sanger, pasqualucci 2001, 4
64
+Sanger, Pasqualucci 2001, 4
65
+DLBCL, exome, 60
66
+exome, Reddy 2017, 60
67
+DLBCL, exome, 2
68
+exome, Pasqualucci 2011, 2
69
+DLBCL, exome, 19
70
+exome, Chapuy 2018, 19
70 71
```
FL_sankey.md
... ...
@@ -9,26 +9,26 @@ config:
9 9
nodeAlignment: right
10 10
---
11 11
sankey-beta
12
+Pasqualucci 2011, FL Tier 1, 2
13
+Morin 2011, FL Tier 1, 14
14
+Morin 2011, FL Tier 2, 1
12 15
Russler-germain 2023, FL Tier 1, 1
13 16
Russler-germain 2023, FL Tier 2, 19
14 17
Hubschmann 2021, FL Tier 1, 2
15 18
Hubschmann 2021, FL Tier 2, 15
16
-Pasqualucci 2011, FL Tier 1, 2
17 19
Krysiak 2017, FL Tier 1, 17
18 20
Krysiak 2017, FL Tier 2, 5
19 21
Okosun 2016, FL Tier 1, 2
20
-Morin 2011, FL Tier 1, 14
21
-Morin 2011, FL Tier 2, 1
22
-FL, RNA-seq/WGS, 15
23
-RNA-seq/WGS, morin 2011, 15
24
-FL, exome, 22
25
-exome, krysiak 2017, 22
26
-FL, WGS, 2
27
-WGS, okosun 2016, 2
28
-FL, WGS, 17
29
-WGS, hubschmann 2021, 17
30 22
FL, exome, 2
31
-exome, pasqualucci 2011, 2
23
+exome, Pasqualucci 2011, 2
24
+FL, WGS, 17
25
+WGS, Hubschmann 2021, 17
26
+FL, RNA-seq/WGS, 15
27
+RNA-seq/WGS, Morin 2011, 15
32 28
FL, exome, 20
33
-exome, russler 2023, 20
29
+exome, Russler 2023, 20
30
+FL, WGS, 2
31
+WGS, Okosun 2016, 2
32
+FL, exome, 22
33
+exome, Krysiak 2017, 22
34 34
```
all_sankey.md
... ...
@@ -1,4 +1,3 @@
1
-
2 1
```mermaid
3 2
---
4 3
config:
... ...
@@ -7,133 +6,134 @@ config:
7 6
linkColor: target
8 7
width: 800
9 8
height: 1000
9
+ nodeAlignment: right
10 10
---
11 11
sankey-beta
12
-Pasqualucci 2001, DLBCL Tier 1, 2
13
-Pasqualucci 2001, DLBCL Tier 2, 2
14
-Morin 2011, DLBCL Tier 1, 24
15
-Morin 2011, DLBCL Tier 2, 1
16
-Morin 2016, DLBCL Tier 1, 2
17
-Chapuy 2018, DLBCL Tier 1, 2
18
-Chapuy 2018, DLBCL Tier 2, 17
19
-Mareschal 2016, DLBCL Tier 1, 2
20
-Reddy 2017, DLBCL Tier 1, 7
21
-Reddy 2017, DLBCL Tier 2, 53
22 12
Albuquerque 2017, DLBCL Tier 1, 3
13
+Morin 2016, DLBCL Tier 1, 2
23 14
Lohr 2012, DLBCL Tier 1, 3
24 15
Lohr 2012, DLBCL Tier 2, 1
25
-Pasqualucci 2011, DLBCL Tier 1, 2
26
-Hubschmann 2021, DLBCL Tier 1, 3
27
-Hubschmann 2021, DLBCL Tier 2, 20
16
+Arthur 2018, DLBCL Tier 1, 8
17
+Arthur 2018, DLBCL Tier 2, 12
18
+Mareschal 2016, DLBCL Tier 1, 2
19
+Zhang 2013, DLBCL Tier 1, 11
20
+Zhang 2013, DLBCL Tier 2, 8
28 21
Pararajalingam 2020, DLBCL Tier 2, 2
29 22
Morin 2013, DLBCL Tier 1, 11
30 23
Morin 2013, DLBCL Tier 2, 29
31
-Arthur 2018, DLBCL Tier 1, 8
32
-Arthur 2018, DLBCL Tier 2, 12
33 24
Schmitz 2018, DLBCL Tier 1, 7
34 25
Schmitz 2018, DLBCL Tier 2, 9
26
+Hubschmann 2021, DLBCL Tier 1, 3
27
+Hubschmann 2021, DLBCL Tier 2, 20
28
+Morin 2011, DLBCL Tier 1, 24
29
+Morin 2011, DLBCL Tier 2, 1
35 30
Pasqualucci 2011, DLBCL Tier 1, 3
36 31
Pasqualucci 2011, DLBCL Tier 2, 4
37
-Zhang 2013, DLBCL Tier 1, 11
38
-Zhang 2013, DLBCL Tier 2, 8
32
+Chapuy 2018, DLBCL Tier 1, 2
33
+Chapuy 2018, DLBCL Tier 2, 17
34
+Reddy 2017, DLBCL Tier 1, 7
35
+Reddy 2017, DLBCL Tier 2, 53
36
+Pasqualucci 2001, DLBCL Tier 1, 2
37
+Pasqualucci 2001, DLBCL Tier 2, 2
38
+Pasqualucci 2011, DLBCL Tier 1, 2
39
+Pasqualucci 2011, FL Tier 1, 2
40
+Morin 2011, FL Tier 1, 14
41
+Morin 2011, FL Tier 2, 1
39 42
Russler-germain 2023, FL Tier 1, 1
40 43
Russler-germain 2023, FL Tier 2, 19
41 44
Hubschmann 2021, FL Tier 1, 2
42 45
Hubschmann 2021, FL Tier 2, 15
43
-Pasqualucci 2011, FL Tier 1, 2
44 46
Krysiak 2017, FL Tier 1, 17
45 47
Krysiak 2017, FL Tier 2, 5
46 48
Okosun 2016, FL Tier 1, 2
47
-Morin 2011, FL Tier 1, 14
48
-Morin 2011, FL Tier 2, 1
49
-Richter 2012, BL Tier 1, 5
50
-Muppidi 2014, BL Tier 1, 1
51
-Muppidi 2014, BL Tier 2, 2
52
-Love 2012, BL Tier 1, 3
53
-Love 2012, BL Tier 2, 56
54
-Thomas 2023, BL Tier 1, 2
55
-Thomas 2023, BL Tier 2, 3
56 49
Schmitz 2012, BL Tier 1, 3
57 50
Schmitz 2012, BL Tier 2, 16
58 51
Panea 2019, BL Tier 1, 4
59 52
Panea 2019, BL Tier 2, 46
53
+Love 2012, BL Tier 1, 3
54
+Love 2012, BL Tier 2, 56
55
+Richter 2012, BL Tier 1, 5
56
+Thomas 2023, BL Tier 1, 2
57
+Thomas 2023, BL Tier 2, 3
60 58
Burkhardt 2022, BL Tier 2, 25
59
+Muppidi 2014, BL Tier 1, 1
60
+Muppidi 2014, BL Tier 2, 2
61 61
Grande 2019, BL Tier 1, 9
62 62
Grande 2019, BL Tier 2, 4
63
-Pararajalingam 2020, MCL Tier 1, 6
64
-Pararajalingam 2020, MCL Tier 2, 1
65 63
Bea 2013, MCL Tier 1, 11
66 64
Bea 2013, MCL Tier 2, 16
67 65
Zhang 2014, MCL Tier 1, 2
68 66
Zhang 2014, MCL Tier 2, 26
69 67
Nadeu 2020, MCL Tier 1, 3
70 68
Nadeu 2020, MCL Tier 2, 2
71
-DLBCL, exome, 7
72
-exome, pasqualucci 2011, 7
73
-DLBCL, exome, 19
74
-exome, zhang 2013, 19
75
-DLBCL, WGS, 40
76
-WGS, morin 2013, 40
77
-DLBCL, exome, 16
78
-exome, schmitz 2018, 16
79
-DLBCL, WGS, 20
80
-WGS, arthur 2018, 20
81
-DLBCL, WGS, 23
82
-WGS, hubschmann 2021, 23
83
-DLBCL, WGS/exome, 2
84
-WGS/exome, pararajalingam 2020, 2
69
+Pararajalingam 2020, MCL Tier 1, 6
70
+Pararajalingam 2020, MCL Tier 2, 1
85 71
DLBCL, exome, 2
86
-exome, pasqualucci 2011, 2
87
-DLBCL, exome, 4
88
-exome, lohr 2012, 4
72
+exome, Morin 2016, 2
89 73
DLBCL, exome, 3
90
-exome, albuquerque 2017, 3
91
-DLBCL, exome, 60
92
-exome, reddy 2017, 60
93
-DLBCL, exome, 2
94
-exome, mareschal 2016, 2
74
+exome, Albuquerque 2017, 3
75
+DLBCL, exome, 4
76
+exome, Lohr 2012, 4
77
+DLBCL, WGS/exome, 2
78
+WGS/exome, Pararajalingam 2020, 2
95 79
DLBCL, exome, 19
96
-exome, chapuy 2018, 19
80
+exome, Zhang 2013, 19
81
+DLBCL, WGS, 20
82
+WGS, Arthur 2018, 20
97 83
DLBCL, exome, 2
98
-exome, morin 2016, 2
84
+exome, Mareschal 2016, 2
85
+DLBCL, exome, 16
86
+exome, Schmitz 2018, 16
87
+DLBCL, WGS, 40
88
+WGS, Morin 2013, 40
99 89
DLBCL, RNA-seq/WGS, 25
100
-RNA-seq/WGS, morin 2011, 25
90
+RNA-seq/WGS, Morin 2011, 25
91
+DLBCL, WGS, 23
92
+WGS, Hubschmann 2021, 23
93
+DLBCL, exome, 7
94
+exome, Pasqualucci 2011, 7
101 95
DLBCL, Sanger, 4
102
-Sanger, pasqualucci 2001, 4
103
-FL, RNA-seq/WGS, 15
104
-RNA-seq/WGS, morin 2011, 15
105
-FL, exome, 22
106
-exome, krysiak 2017, 22
107
-FL, WGS, 2
108
-WGS, okosun 2016, 2
109
-FL, WGS, 17
110
-WGS, hubschmann 2021, 17
96
+Sanger, Pasqualucci 2001, 4
97
+DLBCL, exome, 60
98
+exome, Reddy 2017, 60
99
+DLBCL, exome, 2
100
+exome, Pasqualucci 2011, 2
101
+DLBCL, exome, 19
102
+exome, Chapuy 2018, 19
111 103
FL, exome, 2
112
-exome, pasqualucci 2011, 2
104
+exome, Pasqualucci 2011, 2
105
+FL, WGS, 17
106
+WGS, Hubschmann 2021, 17
107
+FL, RNA-seq/WGS, 15
108
+RNA-seq/WGS, Morin 2011, 15
113 109
FL, exome, 20
114
-exome, russler 2023, 20
110
+exome, Russler 2023, 20
111
+FL, WGS, 2
112
+WGS, Okosun 2016, 2
113
+FL, exome, 22
114
+exome, Krysiak 2017, 22
115 115
BL, Sanger, 3
116
-Sanger, muppidi 2014, 3
117
-BL, exome, 59
118
-exome, love 2012, 59
119
-BL, RNA-seq/WGS/exome, 5
120
-RNA-seq/WGS/exome, richter 2012, 5
116
+Sanger, Muppidi 2014, 3
121 117
BL, WGS, 13
122
-WGS, grande 2019, 13
123
-BL, RNA-seq, 19
124
-RNA-seq, schmitz 2012, 19
125
-BL, RNA-seq/exome, 50
126
-RNA-seq/exome, panea 2019, 50
127
-BL, WGS, 5
128
-WGS, thomas 2023, 5
118
+WGS, Grande 2019, 13
129 119
BL, panel, 25
130
-panel, burkhardt 2022, 25
131
-MCL, WGS/exome, 27
132
-WGS/exome, bea 2013, 27
133
-MCL, WGS/exome, 7
134
-WGS/exome, pararajalingam 2020, 7
120
+panel, Burkhardt 2022, 25
121
+BL, WGS, 5
122
+WGS, Thomas 2023, 5
123
+BL, RNA-seq/WGS/exome, 5
124
+RNA-seq/WGS/exome, Richter 2012, 5
125
+BL, exome, 59
126
+exome, Love 2012, 59
127
+BL, RNA-seq/exome, 50
128
+RNA-seq/exome, Panea 2019, 50
129
+BL, RNA-seq, 19
130
+RNA-seq, Schmitz 2012, 19
135 131
MCL, WGS, 5
136
-WGS, nadeu 2020, 5
132
+WGS, Nadeu 2020, 5
133
+MCL, WGS/exome, 27
134
+WGS/exome, Bea 2013, 27
137 135
MCL, exome, 28
138
-exome, zhang 2014, 28
136
+exome, Zhang 2014, 28
137
+MCL, WGS/exome, 7
138
+WGS/exome, Pararajalingam 2020, 7
139 139
```