TPTE.md
... ...
@@ -15,11 +15,15 @@ nocite: |
15 15
16 16
[[include:table1_TPTE.md]]
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+## Mutation incidence in large patient cohorts (GAMBL reanalysis)
18 19
20
+### BL
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+[[include:tables/BL_TPTE.md]]
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-[[include:mermaid_TPTE.md]]
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+
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+[[include:tables/mermaid_TPTE.md]]
23 27
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## References
25 29
VMA21.md
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@@ -23,6 +23,9 @@ Driver mutations affecting this gene in FL have been experimentally demonstrated
23 23
### DLBCL
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[[include:tables/DLBCL_VMA21.md]]
25 25
26
+###
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+[[include:tables/BL_VMA21.md]]
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+
26 29
## Mutation pattern and selective pressure estimates
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[[include:tables/dnds_VMA21.md]]
... ...
@@ -34,6 +37,6 @@ Driver mutations affecting this gene in FL have been experimentally demonstrated
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<!-- ORIGIN: hubschmannMutationalMechanismsShaping2021b -->
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<!-- FL: hubschmannMutationalMechanismsShaping2021b -->
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-[[include:mermaid_VMA21.md]]
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+[[include:tables/mermaid_VMA21.md]]
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39 42
## References
tables/BL_TPTE.md
... ...
@@ -0,0 +1,42 @@
1
+<table class="table" style="margin-left: 0; margin-right: auto;">
2
+ <thead>
3
+ <tr>
4
+ <th style="text-align:left;"> pathology </th>
5
+ <th style="text-align:left;"> Samples </th>
6
+ <th style="text-align:right;"> Incidence </th>
7
+ <th style="text-align:left;"> CI </th>
8
+ </tr>
9
+ </thead>
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+<tbody>
11
+ <tr>
12
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> BL </td>
13
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> GAMBL without Panea </td>
14
+ <td style="text-align:right;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> <span style=" color: rgba(0, 0, 0, 255) !important;border-radius: 4px; padding-right: 4px; padding-left: 4px; background-color: rgba(255, 245, 240, 255) !important;">0</span> </td>
15
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> [0,0] </td>
16
+ </tr>
17
+ <tr>
18
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> BL </td>
19
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> GAMBL with Panea </td>
20
+ <td style="text-align:right;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> <span style=" color: rgba(0, 0, 0, 255) !important;border-radius: 4px; padding-right: 4px; padding-left: 4px; background-color: rgba(255, 245, 240, 255) !important;">0</span> </td>
21
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> [0,0] </td>
22
+ </tr>
23
+ <tr>
24
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> BL </td>
25
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> BLGSP </td>
26
+ <td style="text-align:right;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> <span style=" color: rgba(0, 0, 0, 255) !important;border-radius: 4px; padding-right: 4px; padding-left: 4px; background-color: rgba(255, 245, 240, 255) !important;">0</span> </td>
27
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> [0,0] </td>
28
+ </tr>
29
+ <tr>
30
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> BL </td>
31
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> Zhou/ICGC </td>
32
+ <td style="text-align:right;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> <span style=" color: rgba(0, 0, 0, 255) !important;border-radius: 4px; padding-right: 4px; padding-left: 4px; background-color: rgba(255, 245, 240, 255) !important;">0</span> </td>
33
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> [0,0] </td>
34
+ </tr>
35
+ <tr>
36
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> BL </td>
37
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> Panea </td>
38
+ <td style="text-align:right;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> <span style=" color: rgba(0, 0, 0, 255) !important;border-radius: 4px; padding-right: 4px; padding-left: 4px; background-color: rgba(255, 245, 240, 255) !important;">0</span> </td>
39
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> [0,0] </td>
40
+ </tr>
41
+</tbody>
42
+</table>
... ...
\ No newline at end of file
tables/BL_VMA21.md
... ...
@@ -0,0 +1,42 @@
1
+<table class="table" style="margin-left: 0; margin-right: auto;">
2
+ <thead>
3
+ <tr>
4
+ <th style="text-align:left;"> pathology </th>
5
+ <th style="text-align:left;"> Samples </th>
6
+ <th style="text-align:right;"> Incidence </th>
7
+ <th style="text-align:left;"> CI </th>
8
+ </tr>
9
+ </thead>
10
+<tbody>
11
+ <tr>
12
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> BL </td>
13
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> GAMBL without Panea </td>
14
+ <td style="text-align:right;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> <span style=" color: rgba(0, 0, 0, 255) !important;border-radius: 4px; padding-right: 4px; padding-left: 4px; background-color: rgba(255, 245, 240, 255) !important;">0</span> </td>
15
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> [0,0] </td>
16
+ </tr>
17
+ <tr>
18
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> BL </td>
19
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> GAMBL with Panea </td>
20
+ <td style="text-align:right;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> <span style=" color: rgba(0, 0, 0, 255) !important;border-radius: 4px; padding-right: 4px; padding-left: 4px; background-color: rgba(255, 245, 240, 255) !important;">0</span> </td>
21
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> [0,0] </td>
22
+ </tr>
23
+ <tr>
24
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> BL </td>
25
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> BLGSP </td>
26
+ <td style="text-align:right;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> <span style=" color: rgba(0, 0, 0, 255) !important;border-radius: 4px; padding-right: 4px; padding-left: 4px; background-color: rgba(255, 245, 240, 255) !important;">0</span> </td>
27
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> [0,0] </td>
28
+ </tr>
29
+ <tr>
30
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> BL </td>
31
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> Zhou/ICGC </td>
32
+ <td style="text-align:right;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> <span style=" color: rgba(0, 0, 0, 255) !important;border-radius: 4px; padding-right: 4px; padding-left: 4px; background-color: rgba(255, 245, 240, 255) !important;">0</span> </td>
33
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> [0,0] </td>
34
+ </tr>
35
+ <tr>
36
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> BL </td>
37
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> Panea </td>
38
+ <td style="text-align:right;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> <span style=" color: rgba(0, 0, 0, 255) !important;border-radius: 4px; padding-right: 4px; padding-left: 4px; background-color: rgba(255, 245, 240, 255) !important;">0</span> </td>
39
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> [0,0] </td>
40
+ </tr>
41
+</tbody>
42
+</table>
... ...
\ No newline at end of file