5932b72901c7e070f461c6baef4db0e6e2123e8c
DLBCL_genes.md
| ... | ... | @@ -15,133 +15,133 @@ link-citations: true |
| 15 | 15 | |
| 16 | 16 | |Gene|Tier| First DLBCL evidence | Other entities | |
| 17 | 17 | |:-:|:-:|:-|:-| |
| 18 | -|[ACTB](ACTB)|1, aSHM|[Study Overview](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|[@wienandGenomicAnalysesFlowsorted2019b]| |
|
| 19 | -|[ACTG1](ACTG1)|1, aSHM|[Study Overview](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|[@deschGenotypingCirculatingTumor2020; @spinaGeneticsNodalMarginal2016b]| |
|
| 20 | -|[ARID1A](ARID1A)|1|[Study Overview](papers/zhangGeneticHeterogeneityDiffuse2013)[@zhangGeneticHeterogeneityDiffuse2013]|[@krysiakRecurrentSomaticMutations2017b; @rossiCodingGenomeSplenic2012c; @wienandGenomicAnalysesFlowsorted2019b; @loveGeneticLandscapeMutations2012]| |
|
| 21 | -|[ATM](ATM)|1|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|[@braggioGenomicAnalysisMarginal2012; @beaLandscapeSomaticMutations2013]| |
|
| 22 | -|[B2M](B2M)|1|[Study Overview](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@pararajalingamCodingNoncodingDrivers2020; @reichelFlowSortingExome2015a]| |
|
| 23 | -|[BCL10](BCL10)|1|[Study Overview](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@russler-germainMutationsAssociatedProgression2023b; @spinaGeneticsNodalMarginal2016b]| |
|
| 24 | -|[BCL2](BCL2)|1, aSHM|[Study Overview](papers/tanakaFrequentIncidenceSomatic1992)[@tanakaFrequentIncidenceSomatic1992]|[@sarkozyMutationalLandscapeGray2021a; @burkhardtClinicalRelevanceMolecular2022b; @morinFrequentMutationHistonemodifying2011]| |
|
| 25 | -|[BCL6](BCL6)|1, aSHM|[Study Overview](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@loveGeneticLandscapeMutations2012]| |
|
| 26 | -|[BCL7A](BCL7A)|1, aSHM|[Study Overview](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]|[@grandeGenomewideDiscoverySomatic2019; @krysiakRecurrentSomaticMutations2017b; @reichelFlowSortingExome2015a]| |
|
| 27 | -|[BIRC6](BIRC6)|1|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|[@sarkozyMutationalLandscapeGray2021a]| |
|
| 28 | -|[BRAF](BRAF)|1|[Study Overview](papers/tiacciBRAFMutationsHairycell2011a)[@tiacciBRAFMutationsHairycell2011a]|[@loveGeneticLandscapeMutations2012]| |
|
| 29 | -|[BTG1](BTG1)|1, aSHM|[Study Overview](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@burkhardtClinicalRelevanceMolecular2022b; @sarkozyMutationalLandscapeGray2021a]| |
|
| 30 | -|[BTG2](BTG2)|1, aSHM|[Study Overview](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@loveGeneticLandscapeMutations2012]| |
|
| 31 | -|[BTK](BTK)|1|[Study Overview](papers/albuquerqueEnhancingKnowledgeDiscovery2017a)[@albuquerqueEnhancingKnowledgeDiscovery2017a]|[@krysiakRecurrentSomaticMutations2017b]| |
|
| 32 | -|[CARD11](CARD11)|1|[Study Overview](papers/lenzOncogenicCARD11Mutations2008)[@lenzOncogenicCARD11Mutations2008]|[@wuGeneticHeterogeneityPrimary2016; @morinFrequentMutationHistonemodifying2011; @paneaWholeGenomeLandscape2019; @yanBCRTLRSignaling2012a]| |
|
| 33 | -|[CCND3](CCND3)|1|[Study Overview](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@richterRecurrentMutationID32012a; @jalladesExomeSequencingIdentifies2017; @deschGenotypingCirculatingTumor2020]| |
|
| 34 | -|[CD58](CD58)|1|[Study Overview](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@schneiderAlterationsCD58Gene2015a]| |
|
| 35 | -|[CD70](CD70)|1|[Study Overview](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@russler-germainMutationsAssociatedProgression2023b]| |
|
| 36 | -|[CD79B](CD79B)|1|[Study Overview](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@paneaWholeGenomeLandscape2019]| |
|
| 37 | -|[CD83](CD83)|1, aSHM|[Study Overview](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|[@dunsCharacterizationDLBCLPMBL2021b; @russler-germainMutationsAssociatedProgression2023b; @paneaWholeGenomeLandscape2019]| |
|
| 38 | -|[CDKN2A](CDKN2A)|1|[Study Overview](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|[@spinaGeneticsNodalMarginal2016b; @grandeGenomewideDiscoverySomatic2019]| |
|
| 39 | -|[CREBBP](CREBBP)|1|[Study Overview](papers/pasqualucciInactivatingMutationsAcetyltransferase2011a)[@pasqualucciInactivatingMutationsAcetyltransferase2011a]|[@dunsCharacterizationDLBCLPMBL2021b; @loveGeneticLandscapeMutations2012; @parryWholeExomeSequencing2013]| |
|
| 40 | -|[CXCR4](CXCR4)|1, aSHM|[Study Overview](papers/khodabakhshiRecurrentTargetsAberrant2012)[@khodabakhshiRecurrentTargetsAberrant2012]|[@krysiakRecurrentSomaticMutations2017b; @paneaWholeGenomeLandscape2019]| |
|
| 41 | -|[CXCR5](CXCR5)|1|[Study Overview](papers/schmitzGeneticsPathogenesisDiffuse2018a)[@schmitzGeneticsPathogenesisDiffuse2018a]|[@mottokIntegrativeGenomicAnalysis2019b]| |
|
| 42 | -|[DDX3X](DDX3X)|1|[Study Overview](papers/schmitzGeneticsPathogenesisDiffuse2018a)[@schmitzGeneticsPathogenesisDiffuse2018a]|[@schmitzBurkittLymphomaPathogenesis2012; @mottokIntegrativeGenomicAnalysis2019b]| |
|
| 43 | -|[DTX1](DTX1)|1, aSHM|[Study Overview](papers/schmitzGeneticsPathogenesisDiffuse2018a)[@schmitzGeneticsPathogenesisDiffuse2018a]|[@gomezUltraDeepSequencingReveals2023; @loveGeneticLandscapeMutations2012; @rossiCodingGenomeSplenic2012c]| |
|
| 44 | -|[DUSP2](DUSP2)|1, aSHM|[Study Overview](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|[@dunsCharacterizationDLBCLPMBL2021b]| |
|
| 45 | -|[EBF1](EBF1)|1, aSHM|[Study Overview](papers/bohleRoleEarlyBcell2013)[@bohleRoleEarlyBcell2013]|[@reichelFlowSortingExome2015a; @thomasGeneticSubgroupsInform2023]| |
|
| 46 | -|[EEF1A1](EEF1A1)|1|[Study Overview](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|[@reichelFlowSortingExome2015a]| |
|
| 47 | -|[EP300](EP300)|1|[Study Overview](papers/pasqualucciInactivatingMutationsAcetyltransferase2011a)[@pasqualucciInactivatingMutationsAcetyltransferase2011a]|[@paneaWholeGenomeLandscape2019; @rossiCodingGenomeSplenic2012c]| |
|
| 48 | -|[ETS1](ETS1)|1, aSHM|[Study Overview](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@paneaWholeGenomeLandscape2019]| |
|
| 49 | -|[ETV6](ETV6)|1, aSHM|[Study Overview](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 50 | -|[EZH2](EZH2)|1|[Study Overview](papers/morinSomaticMutationsAltering2010a)[@morinSomaticMutationsAltering2010a]|[@mottokIntegrativeGenomicAnalysis2019b; @loveGeneticLandscapeMutations2012]| |
|
| 51 | -|[FAS](FAS)|1|[Study Overview](papers/schollMutationsRegionFAS2007)[@schollMutationsRegionFAS2007]|[@spinaGeneticsNodalMarginal2016b]| |
|
| 52 | -|[FBXO11](FBXO11)|1|[Study Overview](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|[@richterRecurrentMutationID32012a; @parryWholeExomeSequencing2013]| |
|
| 53 | -|[FBXW7](FBXW7)|1|[Study Overview](papers/zhangGeneticHeterogeneityDiffuse2013)[@zhangGeneticHeterogeneityDiffuse2013]|| |
|
| 54 | -|[FOXO1](FOXO1)|1|[Study Overview](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@dunsCharacterizationDLBCLPMBL2021b; @schmitzBurkittLymphomaPathogenesis2012]| |
|
| 55 | -|[GNA13](GNA13)|1|[Study Overview](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@reichelFlowSortingExome2015a; @loveGeneticLandscapeMutations2012]| |
|
| 56 | -|[GNAI2](GNAI2)|1|[Study Overview](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|[@grandeGenomewideDiscoverySomatic2019]| |
|
| 57 | -|[GRB2](GRB2)|1|[Study Overview](papers/pasqualucciAnalysisCodingGenome2011)[@pasqualucciAnalysisCodingGenome2011]|[@paneaWholeGenomeLandscape2019]| |
|
| 58 | -|[GRHPR](GRHPR)|1, aSHM|[Study Overview](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]|| |
|
| 59 | -|[HIST1H1B](HIST1H1B)|1, aSHM|[Study Overview](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]|[@krysiakRecurrentSomaticMutations2017b; @sarkozyMutationalLandscapeGray2021a]| |
|
| 60 | -|[HIST1H1C](HIST1H1C)|1, aSHM|[Study Overview](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@paneaWholeGenomeLandscape2019]| |
|
| 61 | -|[HIST1H1D](HIST1H1D)|1, aSHM|[Study Overview](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|[@krysiakRecurrentSomaticMutations2017b; @jalladesExomeSequencingIdentifies2017]| |
|
| 62 | -|[HIST1H1E](HIST1H1E)|1, aSHM|[Study Overview](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|[@reichelFlowSortingExome2015a; @krysiakRecurrentSomaticMutations2017b; @grandeGenomewideDiscoverySomatic2019]| |
|
| 63 | -|[HIST1H2AC](HIST1H2AC)|1, aSHM|[Study Overview](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|[@krysiakRecurrentSomaticMutations2017b]| |
|
| 18 | +|[ACTB](ACTB)|1, aSHM|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|[@wienandGenomicAnalysesFlowsorted2019b]| |
|
| 19 | +|[ACTG1](ACTG1)|1, aSHM|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|[@deschGenotypingCirculatingTumor2020; @spinaGeneticsNodalMarginal2016b]| |
|
| 20 | +|[ARID1A](ARID1A)|1|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)[@zhangGeneticHeterogeneityDiffuse2013]|[@krysiakRecurrentSomaticMutations2017b; @rossiCodingGenomeSplenic2012c; @wienandGenomicAnalysesFlowsorted2019b; @loveGeneticLandscapeMutations2012]| |
|
| 21 | +|[ATM](ATM)|1|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|[@beaLandscapeSomaticMutations2013; @braggioGenomicAnalysisMarginal2012]| |
|
| 22 | +|[B2M](B2M)|1|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@pararajalingamCodingNoncodingDrivers2020; @reichelFlowSortingExome2015a]| |
|
| 23 | +|[BCL10](BCL10)|1|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@spinaGeneticsNodalMarginal2016b; @russler-germainMutationsAssociatedProgression2023b]| |
|
| 24 | +|[BCL2](BCL2)|1, aSHM|[Tanaka et al](papers/tanakaFrequentIncidenceSomatic1992)[@tanakaFrequentIncidenceSomatic1992]|[@sarkozyMutationalLandscapeGray2021a; @morinFrequentMutationHistonemodifying2011; @burkhardtClinicalRelevanceMolecular2022b]| |
|
| 25 | +|[BCL6](BCL6)|1, aSHM|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@loveGeneticLandscapeMutations2012]| |
|
| 26 | +|[BCL7A](BCL7A)|1, aSHM|[Arthur et al](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]|[@krysiakRecurrentSomaticMutations2017b; @reichelFlowSortingExome2015a; @grandeGenomewideDiscoverySomatic2019]| |
|
| 27 | +|[BIRC6](BIRC6)|1|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|[@sarkozyMutationalLandscapeGray2021a]| |
|
| 28 | +|[BRAF](BRAF)|1|[Tiacci et al](papers/tiacciBRAFMutationsHairycell2011a)[@tiacciBRAFMutationsHairycell2011a]|[@loveGeneticLandscapeMutations2012]| |
|
| 29 | +|[BTG1](BTG1)|1, aSHM|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@sarkozyMutationalLandscapeGray2021a; @burkhardtClinicalRelevanceMolecular2022b]| |
|
| 30 | +|[BTG2](BTG2)|1, aSHM|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@loveGeneticLandscapeMutations2012]| |
|
| 31 | +|[BTK](BTK)|1|[Albuquerque et al](papers/albuquerqueEnhancingKnowledgeDiscovery2017a)[@albuquerqueEnhancingKnowledgeDiscovery2017a]|[@krysiakRecurrentSomaticMutations2017b]| |
|
| 32 | +|[CARD11](CARD11)|1|[Lenz et al](papers/lenzOncogenicCARD11Mutations2008)[@lenzOncogenicCARD11Mutations2008]|[@yanBCRTLRSignaling2012a; @paneaWholeGenomeLandscape2019; @morinFrequentMutationHistonemodifying2011; @wuGeneticHeterogeneityPrimary2016]| |
|
| 33 | +|[CCND3](CCND3)|1|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@deschGenotypingCirculatingTumor2020; @richterRecurrentMutationID32012a; @jalladesExomeSequencingIdentifies2017]| |
|
| 34 | +|[CD58](CD58)|1|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@schneiderAlterationsCD58Gene2015a]| |
|
| 35 | +|[CD70](CD70)|1|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@russler-germainMutationsAssociatedProgression2023b]| |
|
| 36 | +|[CD79B](CD79B)|1|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@paneaWholeGenomeLandscape2019]| |
|
| 37 | +|[CD83](CD83)|1, aSHM|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|[@russler-germainMutationsAssociatedProgression2023b; @paneaWholeGenomeLandscape2019; @dunsCharacterizationDLBCLPMBL2021b]| |
|
| 38 | +|[CDKN2A](CDKN2A)|1|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|[@spinaGeneticsNodalMarginal2016b; @grandeGenomewideDiscoverySomatic2019]| |
|
| 39 | +|[CREBBP](CREBBP)|1|[Pasqualucci et al](papers/pasqualucciInactivatingMutationsAcetyltransferase2011a)[@pasqualucciInactivatingMutationsAcetyltransferase2011a]|[@parryWholeExomeSequencing2013; @dunsCharacterizationDLBCLPMBL2021b; @loveGeneticLandscapeMutations2012]| |
|
| 40 | +|[CXCR4](CXCR4)|1, aSHM|[Khodabakhshi et al](papers/khodabakhshiRecurrentTargetsAberrant2012)[@khodabakhshiRecurrentTargetsAberrant2012]|[@paneaWholeGenomeLandscape2019; @krysiakRecurrentSomaticMutations2017b]| |
|
| 41 | +|[CXCR5](CXCR5)|1|[Schmitz et al](papers/schmitzGeneticsPathogenesisDiffuse2018a)[@schmitzGeneticsPathogenesisDiffuse2018a]|[@mottokIntegrativeGenomicAnalysis2019b]| |
|
| 42 | +|[DDX3X](DDX3X)|1|[Schmitz et al](papers/schmitzGeneticsPathogenesisDiffuse2018a)[@schmitzGeneticsPathogenesisDiffuse2018a]|[@mottokIntegrativeGenomicAnalysis2019b; @schmitzBurkittLymphomaPathogenesis2012]| |
|
| 43 | +|[DTX1](DTX1)|1, aSHM|[Schmitz et al](papers/schmitzGeneticsPathogenesisDiffuse2018a)[@schmitzGeneticsPathogenesisDiffuse2018a]|[@rossiCodingGenomeSplenic2012c; @gomezUltraDeepSequencingReveals2023; @loveGeneticLandscapeMutations2012]| |
|
| 44 | +|[DUSP2](DUSP2)|1, aSHM|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|[@dunsCharacterizationDLBCLPMBL2021b]| |
|
| 45 | +|[EBF1](EBF1)|1, aSHM|[Bohle et al](papers/bohleRoleEarlyBcell2013)[@bohleRoleEarlyBcell2013]|[@thomasGeneticSubgroupsInform2023; @reichelFlowSortingExome2015a]| |
|
| 46 | +|[EEF1A1](EEF1A1)|1|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|[@reichelFlowSortingExome2015a]| |
|
| 47 | +|[EP300](EP300)|1|[Pasqualucci et al](papers/pasqualucciInactivatingMutationsAcetyltransferase2011a)[@pasqualucciInactivatingMutationsAcetyltransferase2011a]|[@paneaWholeGenomeLandscape2019; @rossiCodingGenomeSplenic2012c]| |
|
| 48 | +|[ETS1](ETS1)|1, aSHM|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@paneaWholeGenomeLandscape2019]| |
|
| 49 | +|[ETV6](ETV6)|1, aSHM|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 50 | +|[EZH2](EZH2)|1|[Morin et al](papers/morinSomaticMutationsAltering2010a)[@morinSomaticMutationsAltering2010a]|[@loveGeneticLandscapeMutations2012; @mottokIntegrativeGenomicAnalysis2019b]| |
|
| 51 | +|[FAS](FAS)|1|[Scholl et al](papers/schollMutationsRegionFAS2007)[@schollMutationsRegionFAS2007]|[@spinaGeneticsNodalMarginal2016b]| |
|
| 52 | +|[FBXO11](FBXO11)|1|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|[@richterRecurrentMutationID32012a; @parryWholeExomeSequencing2013]| |
|
| 53 | +|[FBXW7](FBXW7)|1|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)[@zhangGeneticHeterogeneityDiffuse2013]|| |
|
| 54 | +|[FOXO1](FOXO1)|1|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@dunsCharacterizationDLBCLPMBL2021b; @schmitzBurkittLymphomaPathogenesis2012]| |
|
| 55 | +|[GNA13](GNA13)|1|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@loveGeneticLandscapeMutations2012; @reichelFlowSortingExome2015a]| |
|
| 56 | +|[GNAI2](GNAI2)|1|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|[@grandeGenomewideDiscoverySomatic2019]| |
|
| 57 | +|[GRB2](GRB2)|1|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)[@pasqualucciAnalysisCodingGenome2011]|[@paneaWholeGenomeLandscape2019]| |
|
| 58 | +|[GRHPR](GRHPR)|1, aSHM|[Arthur et al](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]|| |
|
| 59 | +|[HIST1H1B](HIST1H1B)|1, aSHM|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]|[@sarkozyMutationalLandscapeGray2021a; @krysiakRecurrentSomaticMutations2017b]| |
|
| 60 | +|[HIST1H1C](HIST1H1C)|1, aSHM|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@paneaWholeGenomeLandscape2019]| |
|
| 61 | +|[HIST1H1D](HIST1H1D)|1, aSHM|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|[@krysiakRecurrentSomaticMutations2017b; @jalladesExomeSequencingIdentifies2017]| |
|
| 62 | +|[HIST1H1E](HIST1H1E)|1, aSHM|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|[@krysiakRecurrentSomaticMutations2017b; @grandeGenomewideDiscoverySomatic2019; @reichelFlowSortingExome2015a]| |
|
| 63 | +|[HIST1H2AC](HIST1H2AC)|1, aSHM|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|[@krysiakRecurrentSomaticMutations2017b]| |
|
| 64 | 64 | |[HIST1H2AM](HIST1H2AM)|1, aSHM||[@paneaWholeGenomeLandscape2019; @krysiakRecurrentSomaticMutations2017b]| |
| 65 | -|[HIST1H2BC](HIST1H2BC)|1, aSHM|[Study Overview](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|[@krysiakRecurrentSomaticMutations2017b; @mottokIntegrativeGenomicAnalysis2019b]| |
|
| 65 | +|[HIST1H2BC](HIST1H2BC)|1, aSHM|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|[@mottokIntegrativeGenomicAnalysis2019b; @krysiakRecurrentSomaticMutations2017b]| |
|
| 66 | 66 | |[HIST1H2BK](HIST1H2BK)|1, aSHM||[@paneaWholeGenomeLandscape2019; @rossiCodingGenomeSplenic2012c]| |
| 67 | -|[HIST1H3B](HIST1H3B)|1, aSHM|[Study Overview](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|[@reichelFlowSortingExome2015a]| |
|
| 68 | -|[HIST2H2BE](HIST2H2BE)|1, aSHM|[Study Overview](papers/schmitzGeneticsPathogenesisDiffuse2018a)[@schmitzGeneticsPathogenesisDiffuse2018a]|| |
|
| 69 | -|[HLA-A](HLA-A)|1|[Study Overview](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|[@deschGenotypingCirculatingTumor2020]| |
|
| 70 | -|[HLA-B](HLA-B)|1|[Study Overview](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|[@wienandGenomicAnalysesFlowsorted2019b]| |
|
| 67 | +|[HIST1H3B](HIST1H3B)|1, aSHM|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|[@reichelFlowSortingExome2015a]| |
|
| 68 | +|[HIST2H2BE](HIST2H2BE)|1, aSHM|[Schmitz et al](papers/schmitzGeneticsPathogenesisDiffuse2018a)[@schmitzGeneticsPathogenesisDiffuse2018a]|| |
|
| 69 | +|[HLA-A](HLA-A)|1|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|[@deschGenotypingCirculatingTumor2020]| |
|
| 70 | +|[HLA-B](HLA-B)|1|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|[@wienandGenomicAnalysesFlowsorted2019b]| |
|
| 71 | 71 | |[HLA-C](HLA-C)|1||[@gomezUltraDeepSequencingReveals2023]| |
| 72 | 72 | |[HLA-DMB](HLA-DMB)|1||| |
| 73 | -|[HNRNPU](HNRNPU)|1, aSHM|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|[@paneaWholeGenomeLandscape2019]| |
|
| 73 | +|[HNRNPU](HNRNPU)|1, aSHM|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|[@paneaWholeGenomeLandscape2019]| |
|
| 74 | 74 | |[HVCN1](HVCN1)|1||[@krysiakRecurrentSomaticMutations2017b]| |
| 75 | -|[IKZF3](IKZF3)|1|[Study Overview](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|[@paneaWholeGenomeLandscape2019]| |
|
| 76 | -|[IL4R](IL4R)|1, aSHM|[Study Overview](papers/dunsCharacterizationDLBCLPMBL2021b)[@dunsCharacterizationDLBCLPMBL2021b]|[@viganoSomaticIL4RMutations2018b]| |
|
| 77 | -|[IRF4](IRF4)|1, aSHM|[Study Overview](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@mottokIntegrativeGenomicAnalysis2019b]| |
|
| 78 | -|[IRF8](IRF8)|1, aSHM|[Study Overview](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@paneaWholeGenomeLandscape2019; @mottokIntegrativeGenomicAnalysis2019b]| |
|
| 79 | -|[ITPKB](ITPKB)|1, aSHM|[Study Overview](papers/schmitzGeneticsPathogenesisDiffuse2018a)[@schmitzGeneticsPathogenesisDiffuse2018a]|[@reichelFlowSortingExome2015a]| |
|
| 80 | -|[KLF2](KLF2)|1, aSHM|[Study Overview](papers/pasqualucciAnalysisCodingGenome2011)[@pasqualucciAnalysisCodingGenome2011]|[@jalladesExomeSequencingIdentifies2017; @deschGenotypingCirculatingTumor2020]| |
|
| 81 | -|[KLHL14](KLHL14)|1|[Study Overview](papers/zhangGeneticHeterogeneityDiffuse2013)[@zhangGeneticHeterogeneityDiffuse2013]|| |
|
| 82 | -|[KLHL6](KLHL6)|1, aSHM|[Study Overview](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@paneaWholeGenomeLandscape2019; @ganapathiGeneticLandscapeDural2016]| |
|
| 83 | -|[KMT2C](KMT2C)|1|[Study Overview](papers/zhangGeneticHeterogeneityDiffuse2013)[@zhangGeneticHeterogeneityDiffuse2013]|[@zhangGenomicLandscapeMantle2014; @sarkozyMutationalLandscapeGray2021a; @zhouSporadicEndemicBurkitt2019]| |
|
| 84 | -|[KMT2D](KMT2D)|1|[Study Overview](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@rossiCodingGenomeSplenic2012c; @grandeGenomewideDiscoverySomatic2019; @beaLandscapeSomaticMutations2013; @deschGenotypingCirculatingTumor2020]| |
|
| 85 | -|[KRAS](KRAS)|1|[Study Overview](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 86 | -|[LCOR](LCOR)|1|[Study Overview](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]|| |
|
| 87 | -|[LTB](LTB)|1, aSHM|[Study Overview](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]|[@paneaWholeGenomeLandscape2019; @deschGenotypingCirculatingTumor2020]| |
|
| 88 | -|[MEF2B](MEF2B)|1, aSHM|[Study Overview](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@beaLandscapeSomaticMutations2013]| |
|
| 89 | -|[MEF2C](MEF2C)|1, aSHM|[Study Overview](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]|| |
|
| 90 | -|[MGA](MGA)|1|[Study Overview](papers/zhangGeneticHeterogeneityDiffuse2013)[@zhangGeneticHeterogeneityDiffuse2013]|[@jalladesExomeSequencingIdentifies2017]| |
|
| 91 | -|[MPEG1](MPEG1)|1|[Study Overview](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 92 | -|[MS4A1](MS4A1)|1, aSHM|[Study Overview](papers/rushtonGeneticEvolutionaryPatterns2020)[@rushtonGeneticEvolutionaryPatterns2020]|[@mottokIntegrativeGenomicAnalysis2019b]| |
|
| 93 | -|[MTOR](MTOR)|1|[Study Overview](papers/zhangGeneticHeterogeneityDiffuse2013)[@zhangGeneticHeterogeneityDiffuse2013]|[@paneaWholeGenomeLandscape2019]| |
|
| 94 | -|[MYC](MYC)|1, aSHM|[Study Overview](papers/pasqualucciHypermutationMultipleProtooncogenes2001a)[@pasqualucciHypermutationMultipleProtooncogenes2001a]|[@dunsCharacterizationDLBCLPMBL2021b; @johnstonCmycHypermutationBurkitt1992; @jalladesExomeSequencingIdentifies2017]| |
|
| 95 | -|[MYD88](MYD88)|1|[Study Overview](papers/ngoOncogenicallyActiveMYD882011a)[@ngoOncogenicallyActiveMYD882011a]|[@yanBCRTLRSignaling2012a]| |
|
| 96 | -|[NFKBIA](NFKBIA)|1|[Study Overview](papers/lakeMutationsNFKBIAEncoding2009)[@lakeMutationsNFKBIAEncoding2009]|[@russler-germainMutationsAssociatedProgression2023b; @wienandGenomicAnalysesFlowsorted2019b]| |
|
| 97 | -|[NFKBIE](NFKBIE)|1|[Study Overview](papers/morinGeneticLandscapesRelapsed2016)[@morinGeneticLandscapesRelapsed2016]|[@pararajalingamCodingNoncodingDrivers2020; @mansouriFrequentNFKBIEDeletions2016]| |
|
| 98 | -|[NFKBIZ](NFKBIZ)|1, noncoding|[Study Overview](papers/morinGeneticLandscapesRelapsed2016)[@morinGeneticLandscapesRelapsed2016]|| |
|
| 99 | -|[NOL9](NOL9)|1, aSHM|[Study Overview](papers/schmitzGeneticsPathogenesisDiffuse2018a)[@schmitzGeneticsPathogenesisDiffuse2018a]|[@spinaGeneticsNodalMarginal2016b]| |
|
| 100 | -|[NOTCH1](NOTCH1)|1|[Study Overview](papers/pasqualucciAnalysisCodingGenome2011)[@pasqualucciAnalysisCodingGenome2011]|[@loveGeneticLandscapeMutations2012; @beaLandscapeSomaticMutations2013; @rossiCodingGenomeSplenic2012c]| |
|
| 101 | -|[NOTCH2](NOTCH2)|1|[Study Overview](papers/troenNOTCH2MutationsMarginal2008)[@troenNOTCH2MutationsMarginal2008]|[@beaLandscapeSomaticMutations2013; @paneaWholeGenomeLandscape2019; @rossiCodingGenomeSplenic2012c]| |
|
| 102 | -|[OSBPL10](OSBPL10)|1, aSHM|[Study Overview](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]|| |
|
| 103 | -|[P2RY8](P2RY8)|1|[Study Overview](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|[@muppidiLossSignalingGa132014b]| |
|
| 104 | -|[PIM1](PIM1)|1, aSHM|[Study Overview](papers/pasqualucciHypermutationMultipleProtooncogenes2001a)[@pasqualucciHypermutationMultipleProtooncogenes2001a]|[@dunsCharacterizationDLBCLPMBL2021b; @burkhardtClinicalRelevanceMolecular2022b]| |
|
| 105 | -|[PIM2](PIM2)|1, aSHM|[Study Overview](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]|[@reichelFlowSortingExome2015a]| |
|
| 75 | +|[IKZF3](IKZF3)|1|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|[@paneaWholeGenomeLandscape2019]| |
|
| 76 | +|[IL4R](IL4R)|1, aSHM|[Duns et al](papers/dunsCharacterizationDLBCLPMBL2021b)[@dunsCharacterizationDLBCLPMBL2021b]|[@viganoSomaticIL4RMutations2018b]| |
|
| 77 | +|[IRF4](IRF4)|1, aSHM|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@mottokIntegrativeGenomicAnalysis2019b]| |
|
| 78 | +|[IRF8](IRF8)|1, aSHM|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@mottokIntegrativeGenomicAnalysis2019b; @paneaWholeGenomeLandscape2019]| |
|
| 79 | +|[ITPKB](ITPKB)|1, aSHM|[Schmitz et al](papers/schmitzGeneticsPathogenesisDiffuse2018a)[@schmitzGeneticsPathogenesisDiffuse2018a]|[@reichelFlowSortingExome2015a]| |
|
| 80 | +|[KLF2](KLF2)|1, aSHM|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)[@pasqualucciAnalysisCodingGenome2011]|[@deschGenotypingCirculatingTumor2020; @jalladesExomeSequencingIdentifies2017]| |
|
| 81 | +|[KLHL14](KLHL14)|1|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)[@zhangGeneticHeterogeneityDiffuse2013]|| |
|
| 82 | +|[KLHL6](KLHL6)|1, aSHM|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@paneaWholeGenomeLandscape2019; @ganapathiGeneticLandscapeDural2016]| |
|
| 83 | +|[KMT2C](KMT2C)|1|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)[@zhangGeneticHeterogeneityDiffuse2013]|[@zhouSporadicEndemicBurkitt2019; @zhangGenomicLandscapeMantle2014; @sarkozyMutationalLandscapeGray2021a]| |
|
| 84 | +|[KMT2D](KMT2D)|1|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@beaLandscapeSomaticMutations2013; @grandeGenomewideDiscoverySomatic2019; @deschGenotypingCirculatingTumor2020; @rossiCodingGenomeSplenic2012c]| |
|
| 85 | +|[KRAS](KRAS)|1|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 86 | +|[LCOR](LCOR)|1|[Arthur et al](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]|| |
|
| 87 | +|[LTB](LTB)|1, aSHM|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]|[@deschGenotypingCirculatingTumor2020; @paneaWholeGenomeLandscape2019]| |
|
| 88 | +|[MEF2B](MEF2B)|1, aSHM|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@beaLandscapeSomaticMutations2013]| |
|
| 89 | +|[MEF2C](MEF2C)|1, aSHM|[Arthur et al](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]|| |
|
| 90 | +|[MGA](MGA)|1|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)[@zhangGeneticHeterogeneityDiffuse2013]|[@jalladesExomeSequencingIdentifies2017]| |
|
| 91 | +|[MPEG1](MPEG1)|1|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 92 | +|[MS4A1](MS4A1)|1, aSHM|[Rushton et al](papers/rushtonGeneticEvolutionaryPatterns2020)[@rushtonGeneticEvolutionaryPatterns2020]|[@mottokIntegrativeGenomicAnalysis2019b]| |
|
| 93 | +|[MTOR](MTOR)|1|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)[@zhangGeneticHeterogeneityDiffuse2013]|[@paneaWholeGenomeLandscape2019]| |
|
| 94 | +|[MYC](MYC)|1, aSHM|[Pasqualucci et al](papers/pasqualucciHypermutationMultipleProtooncogenes2001a)[@pasqualucciHypermutationMultipleProtooncogenes2001a]|[@dunsCharacterizationDLBCLPMBL2021b; @johnstonCmycHypermutationBurkitt1992; @jalladesExomeSequencingIdentifies2017]| |
|
| 95 | +|[MYD88](MYD88)|1|[Ngo et al](papers/ngoOncogenicallyActiveMYD882011a)[@ngoOncogenicallyActiveMYD882011a]|[@yanBCRTLRSignaling2012a]| |
|
| 96 | +|[NFKBIA](NFKBIA)|1|[Lake et al](papers/lakeMutationsNFKBIAEncoding2009)[@lakeMutationsNFKBIAEncoding2009]|[@wienandGenomicAnalysesFlowsorted2019b; @russler-germainMutationsAssociatedProgression2023b]| |
|
| 97 | +|[NFKBIE](NFKBIE)|1|[Morin et al](papers/morinGeneticLandscapesRelapsed2016)[@morinGeneticLandscapesRelapsed2016]|[@mansouriFrequentNFKBIEDeletions2016; @pararajalingamCodingNoncodingDrivers2020]| |
|
| 98 | +|[NFKBIZ](NFKBIZ)|1, noncoding|[Morin et al](papers/morinGeneticLandscapesRelapsed2016)[@morinGeneticLandscapesRelapsed2016]|| |
|
| 99 | +|[NOL9](NOL9)|1, aSHM|[Schmitz et al](papers/schmitzGeneticsPathogenesisDiffuse2018a)[@schmitzGeneticsPathogenesisDiffuse2018a]|[@spinaGeneticsNodalMarginal2016b]| |
|
| 100 | +|[NOTCH1](NOTCH1)|1|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)[@pasqualucciAnalysisCodingGenome2011]|[@beaLandscapeSomaticMutations2013; @loveGeneticLandscapeMutations2012; @rossiCodingGenomeSplenic2012c]| |
|
| 101 | +|[NOTCH2](NOTCH2)|1|[Troen et al](papers/troenNOTCH2MutationsMarginal2008)[@troenNOTCH2MutationsMarginal2008]|[@beaLandscapeSomaticMutations2013; @paneaWholeGenomeLandscape2019; @rossiCodingGenomeSplenic2012c]| |
|
| 102 | +|[OSBPL10](OSBPL10)|1, aSHM|[Arthur et al](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]|| |
|
| 103 | +|[P2RY8](P2RY8)|1|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|[@muppidiLossSignalingGa132014b]| |
|
| 104 | +|[PIM1](PIM1)|1, aSHM|[Pasqualucci et al](papers/pasqualucciHypermutationMultipleProtooncogenes2001a)[@pasqualucciHypermutationMultipleProtooncogenes2001a]|[@dunsCharacterizationDLBCLPMBL2021b; @burkhardtClinicalRelevanceMolecular2022b]| |
|
| 105 | +|[PIM2](PIM2)|1, aSHM|[Arthur et al](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]|[@reichelFlowSortingExome2015a]| |
|
| 106 | 106 | |[POU2AF1](POU2AF1)|1, aSHM||[@krysiakRecurrentSomaticMutations2017b]| |
| 107 | -|[POU2F2](POU2F2)|1|[Study Overview](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|[@krysiakRecurrentSomaticMutations2017b]| |
|
| 108 | -|[PRDM1](PRDM1)|1|[Study Overview](papers/pasqualucciInactivationPRDM1BLIMP12006a)[@pasqualucciInactivationPRDM1BLIMP12006a]|| |
|
| 107 | +|[POU2F2](POU2F2)|1|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|[@krysiakRecurrentSomaticMutations2017b]| |
|
| 108 | +|[PRDM1](PRDM1)|1|[Pasqualucci et al](papers/pasqualucciInactivationPRDM1BLIMP12006a)[@pasqualucciInactivationPRDM1BLIMP12006a]|| |
|
| 109 | 109 | |[PTEN](PTEN)|1||[@loveGeneticLandscapeMutations2012]| |
| 110 | 110 | |[PTPRD](PTPRD)|1||[@spinaGeneticsNodalMarginal2016b]| |
| 111 | -|[RB1](RB1)|1|[Study Overview](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|[@zhangGenomicLandscapeMantle2014]| |
|
| 111 | +|[RB1](RB1)|1|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|[@zhangGenomicLandscapeMantle2014]| |
|
| 112 | 112 | |[RFX7](RFX7)|1||[@grandeGenomewideDiscoverySomatic2019]| |
| 113 | 113 | |[RHOA](RHOA)|1||[@richterRecurrentMutationID32012a]| |
| 114 | -|[RRAGC](RRAGC)|1|[Study Overview](papers/okosunRecurrentMTORC1activatingRRAGC2016a)[@okosunRecurrentMTORC1activatingRRAGC2016a]|| |
|
| 115 | -|[S1PR2](S1PR2)|1, aSHM|[Study Overview](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@muppidiLossSignalingGa132014b]| |
|
| 116 | -|[SETD1B](SETD1B)|1|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 114 | +|[RRAGC](RRAGC)|1|[Okosun et al](papers/okosunRecurrentMTORC1activatingRRAGC2016a)[@okosunRecurrentMTORC1activatingRRAGC2016a]|| |
|
| 115 | +|[S1PR2](S1PR2)|1, aSHM|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@muppidiLossSignalingGa132014b]| |
|
| 116 | +|[SETD1B](SETD1B)|1|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 117 | 117 | |[SF3B1](SF3B1)|1||[@loveGeneticLandscapeMutations2012]| |
| 118 | -|[SGK1](SGK1)|1, aSHM|[Study Overview](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@dunsCharacterizationDLBCLPMBL2021b]| |
|
| 118 | +|[SGK1](SGK1)|1, aSHM|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@dunsCharacterizationDLBCLPMBL2021b]| |
|
| 119 | 119 | |[SIN3A](SIN3A)|1||[@grandeGenomewideDiscoverySomatic2019; @rossiCodingGenomeSplenic2012c]| |
| 120 | -|[SMARCA4](SMARCA4)|1|[Study Overview](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|[@krysiakRecurrentSomaticMutations2017b; @richterRecurrentMutationID32012a; @nadeuGenomicEpigenomicInsights2020b]| |
|
| 121 | -|[SOCS1](SOCS1)|1, aSHM|[Study Overview](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@wenigerMutationsTumorSuppressor2006a]| |
|
| 122 | -|[SPEN](SPEN)|1|[Study Overview](papers/rossiCodingGenomeSplenic2012c)[@rossiCodingGenomeSplenic2012c]|[@sarkozyMutationalLandscapeGray2021a]| |
|
| 123 | -|[STAT3](STAT3)|1|[Study Overview](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 124 | -|[STAT6](STAT6)|1|[Study Overview](papers/yildizActivatingSTAT6Mutations2015c)[@yildizActivatingSTAT6Mutations2015c]|[@ritzRecurrentMutationsSTAT62009a]| |
|
| 125 | -|[TAF1](TAF1)|1|[Study Overview](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|[@spinaGeneticsNodalMarginal2016b]| |
|
| 126 | -|[TBL1XR1](TBL1XR1)|1|[Study Overview](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|[@rossiCodingGenomeSplenic2012c]| |
|
| 127 | -|[TET2](TET2)|1|[Study Overview](papers/albuquerqueEnhancingKnowledgeDiscovery2017a)[@albuquerqueEnhancingKnowledgeDiscovery2017a]|[@paneaWholeGenomeLandscape2019]| |
|
| 128 | -|[TMEM30A](TMEM30A)|1|[Study Overview](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|| |
|
| 129 | -|[TMSB4X](TMSB4X)|1, aSHM|[Study Overview](papers/albuquerqueEnhancingKnowledgeDiscovery2017a)[@albuquerqueEnhancingKnowledgeDiscovery2017a]|| |
|
| 130 | -|[TNFAIP3](TNFAIP3)|1|[Study Overview](papers/compagnoMutationsMultipleGenes2009a)[@compagnoMutationsMultipleGenes2009a]|[@schmitzTNFAIP3A20Tumor2009a; @rossiAlterationBIRC3Multiple2011a]| |
|
| 131 | -|[TNFRSF14](TNFRSF14)|1|[Study Overview](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@spinaGeneticsNodalMarginal2016b; @cheungAcquiredTNFRSF14Mutations2010a]| |
|
| 132 | -|[TOX](TOX)|1|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 133 | -|[TP53](TP53)|1|[Study Overview](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|[@rossiCodingGenomeSplenic2012c; @tiacciPervasiveMutationsJAKSTAT2018b; @beaLandscapeSomaticMutations2013; @morinFrequentMutationHistonemodifying2011; @wildaInactivationARFMDM2p53Pathway2004]| |
|
| 134 | -|[TRRAP](TRRAP)|1|[Study Overview](papers/parryWholeExomeSequencing2013)[@parryWholeExomeSequencing2013]|[@rossiCodingGenomeSplenic2012c]| |
|
| 135 | -|[UBE2A](UBE2A)|1|[Study Overview](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|[@reichelFlowSortingExome2015a]| |
|
| 136 | -|[UNC5C](UNC5C)|1|[Study Overview](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 120 | +|[SMARCA4](SMARCA4)|1|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|[@nadeuGenomicEpigenomicInsights2020b; @richterRecurrentMutationID32012a; @krysiakRecurrentSomaticMutations2017b]| |
|
| 121 | +|[SOCS1](SOCS1)|1, aSHM|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@wenigerMutationsTumorSuppressor2006a]| |
|
| 122 | +|[SPEN](SPEN)|1|[Rossi et al](papers/rossiCodingGenomeSplenic2012c)[@rossiCodingGenomeSplenic2012c]|[@sarkozyMutationalLandscapeGray2021a]| |
|
| 123 | +|[STAT3](STAT3)|1|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 124 | +|[STAT6](STAT6)|1|[Yildiz et al](papers/yildizActivatingSTAT6Mutations2015c)[@yildizActivatingSTAT6Mutations2015c]|[@ritzRecurrentMutationsSTAT62009a]| |
|
| 125 | +|[TAF1](TAF1)|1|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|[@spinaGeneticsNodalMarginal2016b]| |
|
| 126 | +|[TBL1XR1](TBL1XR1)|1|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|[@rossiCodingGenomeSplenic2012c]| |
|
| 127 | +|[TET2](TET2)|1|[Albuquerque et al](papers/albuquerqueEnhancingKnowledgeDiscovery2017a)[@albuquerqueEnhancingKnowledgeDiscovery2017a]|[@paneaWholeGenomeLandscape2019]| |
|
| 128 | +|[TMEM30A](TMEM30A)|1|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|| |
|
| 129 | +|[TMSB4X](TMSB4X)|1, aSHM|[Albuquerque et al](papers/albuquerqueEnhancingKnowledgeDiscovery2017a)[@albuquerqueEnhancingKnowledgeDiscovery2017a]|| |
|
| 130 | +|[TNFAIP3](TNFAIP3)|1|[Compagno et al](papers/compagnoMutationsMultipleGenes2009a)[@compagnoMutationsMultipleGenes2009a]|[@schmitzTNFAIP3A20Tumor2009a; @rossiAlterationBIRC3Multiple2011a]| |
|
| 131 | +|[TNFRSF14](TNFRSF14)|1|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@spinaGeneticsNodalMarginal2016b; @cheungAcquiredTNFRSF14Mutations2010a]| |
|
| 132 | +|[TOX](TOX)|1|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 133 | +|[TP53](TP53)|1|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|[@rossiCodingGenomeSplenic2012c; @morinFrequentMutationHistonemodifying2011; @beaLandscapeSomaticMutations2013; @wildaInactivationARFMDM2p53Pathway2004; @tiacciPervasiveMutationsJAKSTAT2018b]| |
|
| 134 | +|[TRRAP](TRRAP)|1|[Parry et al](papers/parryWholeExomeSequencing2013)[@parryWholeExomeSequencing2013]|[@rossiCodingGenomeSplenic2012c]| |
|
| 135 | +|[UBE2A](UBE2A)|1|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|[@reichelFlowSortingExome2015a]| |
|
| 136 | +|[UNC5C](UNC5C)|1|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 137 | 137 | |[USP7](USP7)|1||[@grandeGenomewideDiscoverySomatic2019]| |
| 138 | -|[VPS13B](VPS13B)|1|[Study Overview](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 139 | -|[WEE1](WEE1)|1|[Study Overview](papers/schmitzGeneticsPathogenesisDiffuse2018a)[@schmitzGeneticsPathogenesisDiffuse2018a]|[@reichelFlowSortingExome2015a]| |
|
| 140 | -|[XPO1](XPO1)|1|[Study Overview](papers/mareschalWholeExomeSequencing2016)[@mareschalWholeExomeSequencing2016]|[@jardinRecurrentMutationsExportin2016a]| |
|
| 141 | -|[ZC3H12A](ZC3H12A)|1|[Study Overview](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]|| |
|
| 142 | -|[ZFP36L1](ZFP36L1)|1, aSHM|[Study Overview](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@reichelFlowSortingExome2015a; @paneaWholeGenomeLandscape2019]| |
|
| 143 | -|[ZNF292](ZNF292)|1|[Study Overview](papers/zhangGeneticHeterogeneityDiffuse2013)[@zhangGeneticHeterogeneityDiffuse2013]|| |
|
| 144 | -|[ZNF608](ZNF608)|1, aSHM|[Study Overview](papers/zhangGeneticHeterogeneityDiffuse2013)[@zhangGeneticHeterogeneityDiffuse2013]|[@krysiakRecurrentSomaticMutations2017b]| |
|
| 138 | +|[VPS13B](VPS13B)|1|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 139 | +|[WEE1](WEE1)|1|[Schmitz et al](papers/schmitzGeneticsPathogenesisDiffuse2018a)[@schmitzGeneticsPathogenesisDiffuse2018a]|[@reichelFlowSortingExome2015a]| |
|
| 140 | +|[XPO1](XPO1)|1|[Mareschal et al](papers/mareschalWholeExomeSequencing2016)[@mareschalWholeExomeSequencing2016]|[@jardinRecurrentMutationsExportin2016a]| |
|
| 141 | +|[ZC3H12A](ZC3H12A)|1|[Arthur et al](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]|| |
|
| 142 | +|[ZFP36L1](ZFP36L1)|1, aSHM|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@reichelFlowSortingExome2015a; @paneaWholeGenomeLandscape2019]| |
|
| 143 | +|[ZNF292](ZNF292)|1|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)[@zhangGeneticHeterogeneityDiffuse2013]|| |
|
| 144 | +|[ZNF608](ZNF608)|1, aSHM|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)[@zhangGeneticHeterogeneityDiffuse2013]|[@krysiakRecurrentSomaticMutations2017b]| |
|
| 145 | 145 | |
| 146 | 146 | ## Tier 2 DLBCL genes |
| 147 | 147 | |
| ... | ... | @@ -150,220 +150,220 @@ link-citations: true |
| 150 | 150 | ### This includes *29 genes failed QC (2-F) |
| 151 | 151 | |Gene|Tier| First DLBCL evidence | Other entities | |
| 152 | 152 | |:-:|:-:|:-|:-| |
| 153 | -|[ABI3BP](ABI3BP)|2|[Study Overview](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 154 | -|[ADAMTS1](ADAMTS1)|2|[Study Overview](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|| |
|
| 155 | -|[AICDA](AICDA)|2, aSHM|[Study Overview](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]|| |
|
| 156 | -|[ANKRD12](ANKRD12)|2|[Study Overview](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|| |
|
| 157 | -|[ARID5B](ARID5B)|2|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|[@gomezUltraDeepSequencingReveals2023]| |
|
| 158 | -|[ATR](ATR)|2|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 153 | +|[ABI3BP](ABI3BP)|2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 154 | +|[ADAMTS1](ADAMTS1)|2|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|| |
|
| 155 | +|[AICDA](AICDA)|2, aSHM|[Arthur et al](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]|| |
|
| 156 | +|[ANKRD12](ANKRD12)|2|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|| |
|
| 157 | +|[ARID5B](ARID5B)|2|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|[@gomezUltraDeepSequencingReveals2023]| |
|
| 158 | +|[ATR](ATR)|2|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 159 | 159 | |[BCL11A](BCL11A)|2, aSHM||| |
| 160 | -|[BCOR](BCOR)|2||[@nadeuGenomicEpigenomicInsights2020b; @jalladesExomeSequencingIdentifies2017]| |
|
| 161 | -|[BCR](BCR)|2, aSHM|[Study Overview](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 162 | -|[BIRC3](BIRC3)|2, aSHM|[Study Overview](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]|[@dunsCharacterizationDLBCLPMBL2021b; @beaLandscapeSomaticMutations2013; @rossiAlterationBIRC3Multiple2011a]| |
|
| 160 | +|[BCOR](BCOR)|2||[@jalladesExomeSequencingIdentifies2017; @nadeuGenomicEpigenomicInsights2020b]| |
|
| 161 | +|[BCR](BCR)|2, aSHM|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 162 | +|[BIRC3](BIRC3)|2, aSHM|[Arthur et al](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]|[@rossiAlterationBIRC3Multiple2011a; @dunsCharacterizationDLBCLPMBL2021b; @beaLandscapeSomaticMutations2013]| |
|
| 163 | 163 | |[BLK](BLK)|2, aSHM||| |
| 164 | -|[BRINP3](BRINP3)|2|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 165 | -|[BTBD3](BTBD3)|2|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 166 | -|[CADPS2](CADPS2)|2|[Study Overview](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|| |
|
| 167 | -|[CASP8](CASP8)|2|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 168 | -|[CCL4](CCL4)|2|[Study Overview](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]|| |
|
| 169 | -|[CD22](CD22)|2|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 170 | -|[CD274](CD274)|2|[Study Overview](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|| |
|
| 171 | -|[CD36](CD36)|2|[Study Overview](papers/pasqualucciAnalysisCodingGenome2011)[@pasqualucciAnalysisCodingGenome2011]|| |
|
| 172 | -|[CD44](CD44)|2, aSHM|[Study Overview](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]|| |
|
| 173 | -|[CD74](CD74)|2, aSHM|[Study Overview](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]|| |
|
| 174 | -|[CDH9](CDH9)|2|[Study Overview](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 175 | -|[CIITA](CIITA)|2, aSHM|[Study Overview](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@mottokGenomicAlterationsCIITA2015b]| |
|
| 176 | -|[CNOT2](CNOT2)|2|[Study Overview](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|| |
|
| 177 | -|[CNTNAP5](CNTNAP5)|2|[Study Overview](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 178 | -|[COQ7](COQ7)|2|[Study Overview](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]|| |
|
| 179 | -|[CPS1](CPS1)|2|[Study Overview](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 180 | -|[CRIP1](CRIP1)|2|[Study Overview](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]|| |
|
| 181 | -|[DAZAP1](DAZAP1)|2|[Study Overview](papers/pararajalingamCodingNoncodingDrivers2020)[@pararajalingamCodingNoncodingDrivers2020]|| |
|
| 182 | -|[DHX16](DHX16)|2|[Study Overview](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|| |
|
| 183 | -|[DNAH5](DNAH5)|2|[Study Overview](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|[@jalladesExomeSequencingIdentifies2017]| |
|
| 184 | -|[DNM2](DNM2)|2|[Study Overview](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|| |
|
| 185 | -|[DOCK1](DOCK1)|2|[Study Overview](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]|| |
|
| 186 | -|[DSG4](DSG4)|2|[Study Overview](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 164 | +|[BRINP3](BRINP3)|2|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 165 | +|[BTBD3](BTBD3)|2|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 166 | +|[CADPS2](CADPS2)|2|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|| |
|
| 167 | +|[CASP8](CASP8)|2|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 168 | +|[CCL4](CCL4)|2|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]|| |
|
| 169 | +|[CD22](CD22)|2|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 170 | +|[CD274](CD274)|2|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|| |
|
| 171 | +|[CD36](CD36)|2|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)[@pasqualucciAnalysisCodingGenome2011]|| |
|
| 172 | +|[CD44](CD44)|2, aSHM|[Arthur et al](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]|| |
|
| 173 | +|[CD74](CD74)|2, aSHM|[Arthur et al](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]|| |
|
| 174 | +|[CDH9](CDH9)|2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 175 | +|[CIITA](CIITA)|2, aSHM|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)[@morinFrequentMutationHistonemodifying2011]|[@mottokGenomicAlterationsCIITA2015b]| |
|
| 176 | +|[CNOT2](CNOT2)|2|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|| |
|
| 177 | +|[CNTNAP5](CNTNAP5)|2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 178 | +|[COQ7](COQ7)|2|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]|| |
|
| 179 | +|[CPS1](CPS1)|2|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 180 | +|[CRIP1](CRIP1)|2|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]|| |
|
| 181 | +|[DAZAP1](DAZAP1)|2|[Pararajalingam et al](papers/pararajalingamCodingNoncodingDrivers2020)[@pararajalingamCodingNoncodingDrivers2020]|| |
|
| 182 | +|[DHX16](DHX16)|2|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|| |
|
| 183 | +|[DNAH5](DNAH5)|2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|[@jalladesExomeSequencingIdentifies2017]| |
|
| 184 | +|[DNM2](DNM2)|2|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|| |
|
| 185 | +|[DOCK1](DOCK1)|2|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]|| |
|
| 186 | +|[DSG4](DSG4)|2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 187 | 187 | |[EIF2AK3](EIF2AK3)|2, aSHM||| |
| 188 | 188 | |[EZR](EZR)|2, aSHM||[@deschGenotypingCirculatingTumor2020]| |
| 189 | 189 | |[FAM102A](FAM102A)|2, aSHM||| |
| 190 | -|[FAM38B](FAM38B)|2|[Study Overview](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 190 | +|[FAM38B](FAM38B)|2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 191 | 191 | |[FANK1](FANK1)|2, aSHM||| |
| 192 | -|[FAT4](FAT4)|2|[Study Overview](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|[@zhangGenomicLandscapeMantle2014; @parryWholeExomeSequencing2013]| |
|
| 192 | +|[FAT4](FAT4)|2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|[@parryWholeExomeSequencing2013; @zhangGenomicLandscapeMantle2014]| |
|
| 193 | 193 | |[FCRL3](FCRL3)|2, aSHM||| |
| 194 | 194 | |[FNBP1](FNBP1)|2, aSHM||| |
| 195 | -|[FNDC1](FNDC1)|2|[Study Overview](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 196 | -|[FOXC1](FOXC1)|2|[Study Overview](papers/schmitzGeneticsPathogenesisDiffuse2018a)[@schmitzGeneticsPathogenesisDiffuse2018a]|| |
|
| 197 | -|[FOXP1](FOXP1)|2, aSHM|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 198 | -|[FUBP1](FUBP1)|2|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 199 | -|[FUT5](FUT5)|2|[Study Overview](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]|| |
|
| 200 | -|[GABRA1](GABRA1)|2|[Study Overview](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 201 | -|[GABRA2](GABRA2)|2|[Study Overview](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]|| |
|
| 202 | -|[GAK](GAK)|2|[Study Overview](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|| |
|
| 203 | -|[GOLGA5](GOLGA5)|2|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 204 | -|[GPC5](GPC5)|2|[Study Overview](papers/schmitzGeneticsPathogenesisDiffuse2018a)[@schmitzGeneticsPathogenesisDiffuse2018a]|| |
|
| 205 | -|[GSG2](GSG2)|2|[Study Overview](papers/schmitzGeneticsPathogenesisDiffuse2018a)[@schmitzGeneticsPathogenesisDiffuse2018a]|| |
|
| 206 | -|[H1FOO](H1FOO)|2|[Study Overview](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 207 | -|[HDAC7](HDAC7)|2|[Study Overview](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 208 | -|[HIST1H2AG](HIST1H2AG)|2, aSHM|[Study Overview](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|[@paneaWholeGenomeLandscape2019; @rossiCodingGenomeSplenic2012c; @krysiakRecurrentSomaticMutations2017b]| |
|
| 209 | -|[HIST1H2AL](HIST1H2AL)|2|[Study Overview](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 210 | -|[HIST1H2BO](HIST1H2BO)|2|[Study Overview](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 195 | +|[FNDC1](FNDC1)|2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 196 | +|[FOXC1](FOXC1)|2|[Schmitz et al](papers/schmitzGeneticsPathogenesisDiffuse2018a)[@schmitzGeneticsPathogenesisDiffuse2018a]|| |
|
| 197 | +|[FOXP1](FOXP1)|2, aSHM|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 198 | +|[FUBP1](FUBP1)|2|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 199 | +|[FUT5](FUT5)|2|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]|| |
|
| 200 | +|[GABRA1](GABRA1)|2|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 201 | +|[GABRA2](GABRA2)|2|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]|| |
|
| 202 | +|[GAK](GAK)|2|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|| |
|
| 203 | +|[GOLGA5](GOLGA5)|2|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 204 | +|[GPC5](GPC5)|2|[Schmitz et al](papers/schmitzGeneticsPathogenesisDiffuse2018a)[@schmitzGeneticsPathogenesisDiffuse2018a]|| |
|
| 205 | +|[GSG2](GSG2)|2|[Schmitz et al](papers/schmitzGeneticsPathogenesisDiffuse2018a)[@schmitzGeneticsPathogenesisDiffuse2018a]|| |
|
| 206 | +|[H1FOO](H1FOO)|2|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 207 | +|[HDAC7](HDAC7)|2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 208 | +|[HIST1H2AG](HIST1H2AG)|2, aSHM|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|[@rossiCodingGenomeSplenic2012c; @krysiakRecurrentSomaticMutations2017b; @paneaWholeGenomeLandscape2019]| |
|
| 209 | +|[HIST1H2AL](HIST1H2AL)|2|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 210 | +|[HIST1H2BO](HIST1H2BO)|2|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 211 | 211 | |[HLA-DMA](HLA-DMA)|2||| |
| 212 | -|[HLA-DQA1](HLA-DQA1)|2|[Study Overview](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|| |
|
| 213 | -|[HNF1B](HNF1B)|2|[Study Overview](papers/pasqualucciAnalysisCodingGenome2011)[@pasqualucciAnalysisCodingGenome2011]|| |
|
| 214 | -|[HNRNPH1](HNRNPH1)|2, noncoding|[Study Overview](papers/pararajalingamCodingNoncodingDrivers2020)[@pararajalingamCodingNoncodingDrivers2020]|| |
|
| 215 | -|[ID3](ID3)|2|[Study Overview](papers/schmitzBurkittLymphomaPathogenesis2012)[@schmitzBurkittLymphomaPathogenesis2012]|[@spinaGeneticsNodalMarginal2016b; @richterRecurrentMutationID32012a]| |
|
| 216 | -|[IER2](IER2)|2|[Study Overview](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 217 | -|[IFNGR1](IFNGR1)|2|[Study Overview](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 218 | -|[IGLL5](IGLL5)|2, aSHM||[@deschGenotypingCirculatingTumor2020; @paneaWholeGenomeLandscape2019; @russler-germainMutationsAssociatedProgression2023b]| |
|
| 219 | -|[IKBKB](IKBKB)|2|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|[@rossiAlterationBIRC3Multiple2011a; @wienandGenomicAnalysesFlowsorted2019b]| |
|
| 220 | -|[IKBKE](IKBKE)|2|[Study Overview](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|| |
|
| 212 | +|[HLA-DQA1](HLA-DQA1)|2|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|| |
|
| 213 | +|[HNF1B](HNF1B)|2|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)[@pasqualucciAnalysisCodingGenome2011]|| |
|
| 214 | +|[HNRNPH1](HNRNPH1)|2, noncoding|[Pararajalingam et al](papers/pararajalingamCodingNoncodingDrivers2020)[@pararajalingamCodingNoncodingDrivers2020]|| |
|
| 215 | +|[ID3](ID3)|2|[Schmitz et al](papers/schmitzBurkittLymphomaPathogenesis2012)[@schmitzBurkittLymphomaPathogenesis2012]|[@spinaGeneticsNodalMarginal2016b; @richterRecurrentMutationID32012a]| |
|
| 216 | +|[IER2](IER2)|2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 217 | +|[IFNGR1](IFNGR1)|2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 218 | +|[IGLL5](IGLL5)|2, aSHM||[@russler-germainMutationsAssociatedProgression2023b; @paneaWholeGenomeLandscape2019; @deschGenotypingCirculatingTumor2020]| |
|
| 219 | +|[IKBKB](IKBKB)|2|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|[@wienandGenomicAnalysesFlowsorted2019b; @rossiAlterationBIRC3Multiple2011a]| |
|
| 220 | +|[IKBKE](IKBKE)|2|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|| |
|
| 221 | 221 | |[IL16](IL16)|2||| |
| 222 | -|[IL6](IL6)|2|[Study Overview](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]|| |
|
| 223 | -|[INO80](INO80)|2|[Study Overview](papers/zhangGeneticHeterogeneityDiffuse2013)[@zhangGeneticHeterogeneityDiffuse2013]|| |
|
| 224 | -|[IRF1](IRF1)|2, aSHM|[Study Overview](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|| |
|
| 225 | -|[JAK1](JAK1)|2|[Study Overview](papers/zhangGeneticHeterogeneityDiffuse2013)[@zhangGeneticHeterogeneityDiffuse2013]|[@mottokIntegrativeGenomicAnalysis2019b]| |
|
| 226 | -|[JAK3](JAK3)|2|[Study Overview](papers/zhangGeneticHeterogeneityDiffuse2013)[@zhangGeneticHeterogeneityDiffuse2013]|| |
|
| 227 | -|[JUNB](JUNB)|2|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|[@mottokIntegrativeGenomicAnalysis2019b]| |
|
| 228 | -|[KCMF1](KCMF1)|2|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 229 | -|[KLHL21](KLHL21)|2|[Study Overview](papers/schmitzGeneticsPathogenesisDiffuse2018a)[@schmitzGeneticsPathogenesisDiffuse2018a]|| |
|
| 230 | -|[KRTAP5-5](KRTAP5-5)|2|[Study Overview](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 231 | -|[LAMA5](LAMA5)|2|[Study Overview](papers/schmitzGeneticsPathogenesisDiffuse2018a)[@schmitzGeneticsPathogenesisDiffuse2018a]|| |
|
| 222 | +|[IL6](IL6)|2|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]|| |
|
| 223 | +|[INO80](INO80)|2|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)[@zhangGeneticHeterogeneityDiffuse2013]|| |
|
| 224 | +|[IRF1](IRF1)|2, aSHM|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|| |
|
| 225 | +|[JAK1](JAK1)|2|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)[@zhangGeneticHeterogeneityDiffuse2013]|[@mottokIntegrativeGenomicAnalysis2019b]| |
|
| 226 | +|[JAK3](JAK3)|2|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)[@zhangGeneticHeterogeneityDiffuse2013]|| |
|
| 227 | +|[JUNB](JUNB)|2|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|[@mottokIntegrativeGenomicAnalysis2019b]| |
|
| 228 | +|[KCMF1](KCMF1)|2|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 229 | +|[KLHL21](KLHL21)|2|[Schmitz et al](papers/schmitzGeneticsPathogenesisDiffuse2018a)[@schmitzGeneticsPathogenesisDiffuse2018a]|| |
|
| 230 | +|[KRTAP5-5](KRTAP5-5)|2|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 231 | +|[LAMA5](LAMA5)|2|[Schmitz et al](papers/schmitzGeneticsPathogenesisDiffuse2018a)[@schmitzGeneticsPathogenesisDiffuse2018a]|| |
|
| 232 | 232 | |[LAPTM5](LAPTM5)|2, aSHM||[@hubschmannMutationalMechanismsShaping2021b]| |
| 233 | -|[LPP](LPP)|2, aSHM|[Study Overview](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]|| |
|
| 234 | -|[LRP12](LRP12)|2|[Study Overview](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|| |
|
| 235 | -|[LRRN3](LRRN3)|2|[Study Overview](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|[@sarkozyMutationalLandscapeGray2021a]| |
|
| 236 | -|[LYN](LYN)|2|[Study Overview](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]|| |
|
| 237 | -|[MAGT1](MAGT1)|2|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 238 | -|[MALAT1](MALAT1)|2, aSHM|[Study Overview](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]|| |
|
| 239 | -|[MAP2K1](MAP2K1)|2|[Study Overview](papers/shinBRAFV600EMAP2K12015)[@shinBRAFV600EMAP2K12015]|[@louissaintPediatrictypeNodalFollicular2016a]| |
|
| 240 | -|[MCL1](MCL1)|2|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|[@dunsCharacterizationDLBCLPMBL2021b; @paneaWholeGenomeLandscape2019]| |
|
| 241 | -|[MECOM](MECOM)|2|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 242 | -|[MET](MET)|2|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 243 | -|[MIR142](MIR142)|2, aSHM|[Study Overview](papers/kwanhianMicroRNA142Mutated202012b)[@kwanhianMicroRNA142Mutated202012b]|[@grandeGenomewideDiscoverySomatic2019]| |
|
| 233 | +|[LPP](LPP)|2, aSHM|[Arthur et al](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]|| |
|
| 234 | +|[LRP12](LRP12)|2|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|| |
|
| 235 | +|[LRRN3](LRRN3)|2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|[@sarkozyMutationalLandscapeGray2021a]| |
|
| 236 | +|[LYN](LYN)|2|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]|| |
|
| 237 | +|[MAGT1](MAGT1)|2|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 238 | +|[MALAT1](MALAT1)|2, aSHM|[Arthur et al](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]|| |
|
| 239 | +|[MAP2K1](MAP2K1)|2|[Shin et al](papers/shinBRAFV600EMAP2K12015)[@shinBRAFV600EMAP2K12015]|[@louissaintPediatrictypeNodalFollicular2016a]| |
|
| 240 | +|[MCL1](MCL1)|2|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|[@dunsCharacterizationDLBCLPMBL2021b; @paneaWholeGenomeLandscape2019]| |
|
| 241 | +|[MECOM](MECOM)|2|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 242 | +|[MET](MET)|2|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 243 | +|[MIR142](MIR142)|2, aSHM|[Kwanhian et al](papers/kwanhianMicroRNA142Mutated202012b)[@kwanhianMicroRNA142Mutated202012b]|[@grandeGenomewideDiscoverySomatic2019]| |
|
| 244 | 244 | |[MIR155HG](MIR155HG)|2, aSHM||| |
| 245 | -|[MPDZ](MPDZ)|2|[Study Overview](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|[@reichelFlowSortingExome2015a]| |
|
| 246 | -|[MSH6](MSH6)|2|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 247 | -|[MYBPC2](MYBPC2)|2|[Study Overview](papers/schmitzGeneticsPathogenesisDiffuse2018a)[@schmitzGeneticsPathogenesisDiffuse2018a]|| |
|
| 245 | +|[MPDZ](MPDZ)|2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|[@reichelFlowSortingExome2015a]| |
|
| 246 | +|[MSH6](MSH6)|2|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 247 | +|[MYBPC2](MYBPC2)|2|[Schmitz et al](papers/schmitzGeneticsPathogenesisDiffuse2018a)[@schmitzGeneticsPathogenesisDiffuse2018a]|| |
|
| 248 | 248 | |[MYO1E](MYO1E)|2, aSHM||| |
| 249 | -|[MYOM2](MYOM2)|2|[Study Overview](papers/pasqualucciAnalysisCodingGenome2011)[@pasqualucciAnalysisCodingGenome2011]|| |
|
| 250 | -|[N2RF2](N2RF2)|2|[Study Overview](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|| |
|
| 251 | -|[NANOG](NANOG)|2|[Study Overview](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]|| |
|
| 252 | -|[NAV1](NAV1)|2|[Study Overview](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]|| |
|
| 249 | +|[MYOM2](MYOM2)|2|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)[@pasqualucciAnalysisCodingGenome2011]|| |
|
| 250 | +|[N2RF2](N2RF2)|2|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|| |
|
| 251 | +|[NANOG](NANOG)|2|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]|| |
|
| 252 | +|[NAV1](NAV1)|2|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]|| |
|
| 253 | 253 | |[NCOA3](NCOA3)|2, aSHM||| |
| 254 | 254 | |[NCOR2](NCOR2)|2||[@sarkozyMutationalLandscapeGray2021a; @spinaGeneticsNodalMarginal2016b; @schmitzBurkittLymphomaPathogenesis2012]| |
| 255 | -|[NEAT1](NEAT1)|2, aSHM|[Study Overview](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]|| |
|
| 256 | -|[NF1](NF1)|2|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 255 | +|[NEAT1](NEAT1)|2, aSHM|[Arthur et al](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]|| |
|
| 256 | +|[NF1](NF1)|2|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 257 | 257 | |[NFKB1](NFKB1)|2||| |
| 258 | 258 | |[NLRC5](NLRC5)|2||| |
| 259 | -|[NLRP5](NLRP5)|2|[Study Overview](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 260 | -|[NLRP8](NLRP8)|2|[Study Overview](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]|| |
|
| 261 | -|[ODZ3](ODZ3)|2|[Study Overview](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 262 | -|[OR6K3](OR6K3)|2|[Study Overview](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 263 | -|[P2RX5](P2RX5)|2, aSHM|[Study Overview](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 264 | -|[PAPOLG](PAPOLG)|2|[Study Overview](papers/schmitzGeneticsPathogenesisDiffuse2018a)[@schmitzGeneticsPathogenesisDiffuse2018a]|| |
|
| 265 | -|[PASD1](PASD1)|2|[Study Overview](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 266 | -|[PASK](PASK)|2|[Study Overview](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 267 | -|[PAX5](PAX5)|2, aSHM|[Study Overview](papers/pasqualucciHypermutationMultipleProtooncogenes2001a)[@pasqualucciHypermutationMultipleProtooncogenes2001a]|| |
|
| 259 | +|[NLRP5](NLRP5)|2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 260 | +|[NLRP8](NLRP8)|2|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]|| |
|
| 261 | +|[ODZ3](ODZ3)|2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 262 | +|[OR6K3](OR6K3)|2|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 263 | +|[P2RX5](P2RX5)|2, aSHM|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 264 | +|[PAPOLG](PAPOLG)|2|[Schmitz et al](papers/schmitzGeneticsPathogenesisDiffuse2018a)[@schmitzGeneticsPathogenesisDiffuse2018a]|| |
|
| 265 | +|[PASD1](PASD1)|2|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 266 | +|[PASK](PASK)|2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 267 | +|[PAX5](PAX5)|2, aSHM|[Pasqualucci et al](papers/pasqualucciHypermutationMultipleProtooncogenes2001a)[@pasqualucciHypermutationMultipleProtooncogenes2001a]|| |
|
| 268 | 268 | |[PCBP1](PCBP1)|2||[@schmitzBurkittLymphomaPathogenesis2012]| |
| 269 | -|[PCDHB11](PCDHB11)|2|[Study Overview](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 270 | -|[PCDHB6](PCDHB6)|2|[Study Overview](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 271 | -|[PCLO](PCLO)|2|[Study Overview](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 272 | -|[PDE4DIP](PDE4DIP)|2|[Study Overview](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]|| |
|
| 273 | -|[PDGFC](PDGFC)|2|[Study Overview](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 274 | -|[PDS5B](PDS5B)|2|[Study Overview](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|[@hubschmannMutationalMechanismsShaping2021b]| |
|
| 275 | -|[PIK3R1](PIK3R1)|2|[Study Overview](papers/zhangGeneticHeterogeneityDiffuse2013)[@zhangGeneticHeterogeneityDiffuse2013]|[@paneaWholeGenomeLandscape2019]| |
|
| 276 | -|[PKD1](PKD1)|2|[Study Overview](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 277 | -|[PNPO](PNPO)|2|[Study Overview](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|| |
|
| 278 | -|[POGZ](POGZ)|2|[Study Overview](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 269 | +|[PCDHB11](PCDHB11)|2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 270 | +|[PCDHB6](PCDHB6)|2|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 271 | +|[PCLO](PCLO)|2|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 272 | +|[PDE4DIP](PDE4DIP)|2|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]|| |
|
| 273 | +|[PDGFC](PDGFC)|2|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 274 | +|[PDS5B](PDS5B)|2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|[@hubschmannMutationalMechanismsShaping2021b]| |
|
| 275 | +|[PIK3R1](PIK3R1)|2|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)[@zhangGeneticHeterogeneityDiffuse2013]|[@paneaWholeGenomeLandscape2019]| |
|
| 276 | +|[PKD1](PKD1)|2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 277 | +|[PNPO](PNPO)|2|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|| |
|
| 278 | +|[POGZ](POGZ)|2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 279 | 279 | |[PPP1R9B](PPP1R9B)|2||| |
| 280 | -|[PRKCB](PRKCB)|2|[Study Overview](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 281 | -|[PRKDC](PRKDC)|2|[Study Overview](papers/schmitzGeneticsPathogenesisDiffuse2018a)[@schmitzGeneticsPathogenesisDiffuse2018a]|[@hubschmannMutationalMechanismsShaping2021b]| |
|
| 282 | -|[PRPS1](PRPS1)|2|[Study Overview](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]|| |
|
| 280 | +|[PRKCB](PRKCB)|2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 281 | +|[PRKDC](PRKDC)|2|[Schmitz et al](papers/schmitzGeneticsPathogenesisDiffuse2018a)[@schmitzGeneticsPathogenesisDiffuse2018a]|[@hubschmannMutationalMechanismsShaping2021b]| |
|
| 282 | +|[PRPS1](PRPS1)|2|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]|| |
|
| 283 | 283 | |[PTMA](PTMA)|2, aSHM||| |
| 284 | 284 | |[PTPN1](PTPN1)|2, aSHM||[@gunawardanaRecurrentSomaticMutations2014c]| |
| 285 | -|[PTPN23](PTPN23)|2|[Study Overview](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 286 | -|[PTPN6](PTPN6)|2|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 287 | -|[RAC2](RAC2)|2|[Study Overview](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|[@paneaWholeGenomeLandscape2019]| |
|
| 288 | -|[RAD9A](RAD9A)|2|[Study Overview](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]|| |
|
| 285 | +|[PTPN23](PTPN23)|2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 286 | +|[PTPN6](PTPN6)|2|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 287 | +|[RAC2](RAC2)|2|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|[@paneaWholeGenomeLandscape2019]| |
|
| 288 | +|[RAD9A](RAD9A)|2|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]|| |
|
| 289 | 289 | |[RCC](RCC)|2, aSHM||| |
| 290 | -|[RFTN1](RFTN1)|2, aSHM|[Study Overview](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]|[@dunsCharacterizationDLBCLPMBL2021b]| |
|
| 290 | +|[RFTN1](RFTN1)|2, aSHM|[Arthur et al](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]|[@dunsCharacterizationDLBCLPMBL2021b]| |
|
| 291 | 291 | |[RFXAP](RFXAP)|2||| |
| 292 | 292 | |[RHEX](RHEX)|2, aSHM||| |
| 293 | -|[RHOH](RHOH)|2, aSHM|[Study Overview](papers/pasqualucciHypermutationMultipleProtooncogenes2001a)[@pasqualucciHypermutationMultipleProtooncogenes2001a]|| |
|
| 293 | +|[RHOH](RHOH)|2, aSHM|[Pasqualucci et al](papers/pasqualucciHypermutationMultipleProtooncogenes2001a)[@pasqualucciHypermutationMultipleProtooncogenes2001a]|| |
|
| 294 | 294 | |[RUBCNL](RUBCNL)|2, aSHM||| |
| 295 | -|[S1PR1](S1PR1)|2|[Study Overview](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|[@pararajalingamCodingNoncodingDrivers2020]| |
|
| 296 | -|[SAMD9L](SAMD9L)|2|[Study Overview](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 297 | -|[SARM1](SARM1)|2|[Study Overview](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 295 | +|[S1PR1](S1PR1)|2|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|[@pararajalingamCodingNoncodingDrivers2020]| |
|
| 296 | +|[SAMD9L](SAMD9L)|2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 297 | +|[SARM1](SARM1)|2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 298 | 298 | |[SEL1L3](SEL1L3)|2, aSHM||| |
| 299 | 299 | |[SEPTIN9](SEPTIN9)|2, aSHM||| |
| 300 | -|[SERPINA9](SERPINA9)|2, aSHM|[Study Overview](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]|| |
|
| 301 | -|[SETD2](SETD2)|2|[Study Overview](papers/zhangGeneticHeterogeneityDiffuse2013)[@zhangGeneticHeterogeneityDiffuse2013]|| |
|
| 302 | -|[SETD5](SETD5)|2|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|[@tiacciPervasiveMutationsJAKSTAT2018b]| |
|
| 303 | -|[SIAH2](SIAH2)|2|[Study Overview](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|[@reichelFlowSortingExome2015a]| |
|
| 304 | -|[SLC34A2](SLC34A2)|2|[Study Overview](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|| |
|
| 305 | -|[SLC38A8](SLC38A8)|2|[Study Overview](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 306 | -|[SLITRK6](SLITRK6)|2|[Study Overview](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 307 | -|[SMEK1](SMEK1)|2|[Study Overview](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]|| |
|
| 308 | -|[SRPX](SRPX)|2|[Study Overview](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 309 | -|[SRRM2](SRRM2)|2|[Study Overview](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|[@russler-germainMutationsAssociatedProgression2023b]| |
|
| 310 | -|[ST6GAL1](ST6GAL1)|2, aSHM|[Study Overview](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]|| |
|
| 311 | -|[STAT5B](STAT5B)|2|[Study Overview](papers/zhangGeneticHeterogeneityDiffuse2013)[@zhangGeneticHeterogeneityDiffuse2013]|[@tiacciPervasiveMutationsJAKSTAT2018b]| |
|
| 312 | -|[SYN2](SYN2)|2|[Study Overview](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 313 | -|[SYPL1](SYPL1)|2|[Study Overview](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 314 | -|[TAP1](TAP1)|2|[Study Overview](papers/schmitzGeneticsPathogenesisDiffuse2018a)[@schmitzGeneticsPathogenesisDiffuse2018a]|| |
|
| 315 | -|[TBC1D4](TBC1D4)|2, aSHM|[Study Overview](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]|| |
|
| 300 | +|[SERPINA9](SERPINA9)|2, aSHM|[Arthur et al](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]|| |
|
| 301 | +|[SETD2](SETD2)|2|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)[@zhangGeneticHeterogeneityDiffuse2013]|| |
|
| 302 | +|[SETD5](SETD5)|2|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|[@tiacciPervasiveMutationsJAKSTAT2018b]| |
|
| 303 | +|[SIAH2](SIAH2)|2|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|[@reichelFlowSortingExome2015a]| |
|
| 304 | +|[SLC34A2](SLC34A2)|2|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|| |
|
| 305 | +|[SLC38A8](SLC38A8)|2|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 306 | +|[SLITRK6](SLITRK6)|2|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 307 | +|[SMEK1](SMEK1)|2|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]|| |
|
| 308 | +|[SRPX](SRPX)|2|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 309 | +|[SRRM2](SRRM2)|2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|[@russler-germainMutationsAssociatedProgression2023b]| |
|
| 310 | +|[ST6GAL1](ST6GAL1)|2, aSHM|[Arthur et al](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]|| |
|
| 311 | +|[STAT5B](STAT5B)|2|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)[@zhangGeneticHeterogeneityDiffuse2013]|[@tiacciPervasiveMutationsJAKSTAT2018b]| |
|
| 312 | +|[SYN2](SYN2)|2|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 313 | +|[SYPL1](SYPL1)|2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 314 | +|[TAP1](TAP1)|2|[Schmitz et al](papers/schmitzGeneticsPathogenesisDiffuse2018a)[@schmitzGeneticsPathogenesisDiffuse2018a]|| |
|
| 315 | +|[TBC1D4](TBC1D4)|2, aSHM|[Arthur et al](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]|| |
|
| 316 | 316 | |[TCL1A](TCL1A)|2, aSHM||[@grandeGenomewideDiscoverySomatic2019]| |
| 317 | -|[TGFBR2](TGFBR2)|2|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 318 | -|[TIPARP](TIPARP)|2|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 319 | -|[TLR2](TLR2)|2|[Study Overview](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]|[@beaLandscapeSomaticMutations2013]| |
|
| 320 | -|[TMSL3](TMSL3)|2|[Study Overview](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 321 | -|[TNF](TNF)|2|[Study Overview](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 322 | -|[TRAF3](TRAF3)|2|[Study Overview](papers/pasqualucciAnalysisCodingGenome2011)[@pasqualucciAnalysisCodingGenome2011]|[@ottoGeneticLesionsTRAF32012a; @rossiAlterationBIRC3Multiple2011a]| |
|
| 323 | -|[TRAF6](TRAF6)|2|[Study Overview](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|| |
|
| 317 | +|[TGFBR2](TGFBR2)|2|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 318 | +|[TIPARP](TIPARP)|2|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 319 | +|[TLR2](TLR2)|2|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]|[@beaLandscapeSomaticMutations2013]| |
|
| 320 | +|[TMSL3](TMSL3)|2|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 321 | +|[TNF](TNF)|2|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 322 | +|[TRAF3](TRAF3)|2|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)[@pasqualucciAnalysisCodingGenome2011]|[@rossiAlterationBIRC3Multiple2011a; @ottoGeneticLesionsTRAF32012a]| |
|
| 323 | +|[TRAF6](TRAF6)|2|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|| |
|
| 324 | 324 | |[TRIP12](TRIP12)|2||| |
| 325 | 325 | |[UBE2J1](UBE2J1)|2, aSHM||| |
| 326 | -|[UBR5](UBR5)|2|[Study Overview](papers/zhangGeneticHeterogeneityDiffuse2013)[@zhangGeneticHeterogeneityDiffuse2013]|[@pararajalingamCodingNoncodingDrivers2020]| |
|
| 327 | -|[UNC5B](UNC5B)|2|[Study Overview](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|| |
|
| 328 | -|[UNC5D](UNC5D)|2|[Study Overview](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 329 | -|[WDFY3](WDFY3)|2|[Study Overview](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 330 | -|[WNK1](WNK1)|2|[Study Overview](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|[@jalladesExomeSequencingIdentifies2017; @thomasGeneticSubgroupsInform2023]| |
|
| 326 | +|[UBR5](UBR5)|2|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)[@zhangGeneticHeterogeneityDiffuse2013]|[@pararajalingamCodingNoncodingDrivers2020]| |
|
| 327 | +|[UNC5B](UNC5B)|2|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|| |
|
| 328 | +|[UNC5D](UNC5D)|2|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012a)[@lohrDiscoveryPrioritizationSomatic2012a]|| |
|
| 329 | +|[WDFY3](WDFY3)|2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)[@morinMutationalStructuralAnalysis2013]|| |
|
| 330 | +|[WNK1](WNK1)|2|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|[@jalladesExomeSequencingIdentifies2017; @thomasGeneticSubgroupsInform2023]| |
|
| 331 | 331 | |[XBP1](XBP1)|2, aSHM||| |
| 332 | -|[YY1](YY1)|2|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 333 | -|[ZCCHC7](ZCCHC7)|2, aSHM|[Study Overview](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]|| |
|
| 334 | -|[ZEB2](ZEB2)|2|[Study Overview](papers/zhangGeneticHeterogeneityDiffuse2013)[@zhangGeneticHeterogeneityDiffuse2013]|| |
|
| 335 | -|[ZFX](ZFX)|2|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 336 | -|[ZNF217](ZNF217)|2|[Study Overview](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|[@reichelFlowSortingExome2015a]| |
|
| 337 | -|[ZNF423](ZNF423)|2|[Study Overview](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]|| |
|
| 338 | -|[ANKRD17](ANKRD17)|2-F|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 339 | -|[ARID1B](ARID1B)|2-F|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 340 | -|[CBLB](CBLB)|2-F|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 341 | -|[CDC73](CDC73)|2-F|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|[@loveGeneticLandscapeMutations2012]| |
|
| 342 | -|[CHD1](CHD1)|2-F|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 343 | -|[CHD8](CHD8)|2-F|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|[@grandeGenomewideDiscoverySomatic2019]| |
|
| 344 | -|[CHST2](CHST2)|2-F|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 345 | -|[DCAF6](DCAF6)|2-F|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 346 | -|[DDX10](DDX10)|2-F|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 347 | -|[DICER1](DICER1)|2-F|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 348 | -|[DNMT3A](DNMT3A)|2-F|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 349 | -|[GNAS](GNAS)|2-F|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 350 | -|[HRAS](HRAS)|2-F|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|[@jalladesExomeSequencingIdentifies2017]| |
|
| 351 | -|[LIN54](LIN54)|2-F|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 352 | -|[MAP4K4](MAP4K4)|2-F|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 353 | -|[MARK1](MARK1)|2-F|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 354 | -|[MSH2](MSH2)|2-F|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 355 | -|[MYB](MYB)|2-F|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|[@deschGenotypingCirculatingTumor2020]| |
|
| 356 | -|[NCOR1](NCOR1)|2-F|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 357 | -|[NFKB2](NFKB2)|2-F|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|[@mottokIntegrativeGenomicAnalysis2019b]| |
|
| 358 | -|[PHF6](PHF6)|2-F|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|[@thomasGeneticSubgroupsInform2023]| |
|
| 359 | -|[PIK3CD](PIK3CD)|2-F|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 360 | -|[PTPRK](PTPRK)|2-F|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 361 | -|[RARA](RARA)|2-F|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 362 | -|[RUNX1](RUNX1)|2-F|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 363 | -|[SYK](SYK)|2-F|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 364 | -|[WAC](WAC)|2-F|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|[@rossiCodingGenomeSplenic2012c]| |
|
| 365 | -|[ZBTB7A](ZBTB7A)|2-F|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|[@burkhardtClinicalRelevanceMolecular2022b]| |
|
| 366 | -|[ZFAT](ZFAT)|2-F|[Study Overview](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 332 | +|[YY1](YY1)|2|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 333 | +|[ZCCHC7](ZCCHC7)|2, aSHM|[Arthur et al](papers/arthurGenomewideDiscoverySomatic2018)[@arthurGenomewideDiscoverySomatic2018]|| |
|
| 334 | +|[ZEB2](ZEB2)|2|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)[@zhangGeneticHeterogeneityDiffuse2013]|| |
|
| 335 | +|[ZFX](ZFX)|2|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 336 | +|[ZNF217](ZNF217)|2|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021b)[@hubschmannMutationalMechanismsShaping2021b]|[@reichelFlowSortingExome2015a]| |
|
| 337 | +|[ZNF423](ZNF423)|2|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018b)[@chapuyMolecularSubtypesDiffuse2018b]|| |
|
| 338 | +|[ANKRD17](ANKRD17)|2-F|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 339 | +|[ARID1B](ARID1B)|2-F|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 340 | +|[CBLB](CBLB)|2-F|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 341 | +|[CDC73](CDC73)|2-F|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|[@loveGeneticLandscapeMutations2012]| |
|
| 342 | +|[CHD1](CHD1)|2-F|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 343 | +|[CHD8](CHD8)|2-F|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|[@grandeGenomewideDiscoverySomatic2019]| |
|
| 344 | +|[CHST2](CHST2)|2-F|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 345 | +|[DCAF6](DCAF6)|2-F|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 346 | +|[DDX10](DDX10)|2-F|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 347 | +|[DICER1](DICER1)|2-F|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 348 | +|[DNMT3A](DNMT3A)|2-F|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 349 | +|[GNAS](GNAS)|2-F|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 350 | +|[HRAS](HRAS)|2-F|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|[@jalladesExomeSequencingIdentifies2017]| |
|
| 351 | +|[LIN54](LIN54)|2-F|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 352 | +|[MAP4K4](MAP4K4)|2-F|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 353 | +|[MARK1](MARK1)|2-F|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 354 | +|[MSH2](MSH2)|2-F|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 355 | +|[MYB](MYB)|2-F|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|[@deschGenotypingCirculatingTumor2020]| |
|
| 356 | +|[NCOR1](NCOR1)|2-F|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 357 | +|[NFKB2](NFKB2)|2-F|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|[@mottokIntegrativeGenomicAnalysis2019b]| |
|
| 358 | +|[PHF6](PHF6)|2-F|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|[@thomasGeneticSubgroupsInform2023]| |
|
| 359 | +|[PIK3CD](PIK3CD)|2-F|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 360 | +|[PTPRK](PTPRK)|2-F|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 361 | +|[RARA](RARA)|2-F|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 362 | +|[RUNX1](RUNX1)|2-F|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 363 | +|[SYK](SYK)|2-F|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 364 | +|[WAC](WAC)|2-F|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|[@rossiCodingGenomeSplenic2012c]| |
|
| 365 | +|[ZBTB7A](ZBTB7A)|2-F|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|[@burkhardtClinicalRelevanceMolecular2022b]| |
|
| 366 | +|[ZFAT](ZFAT)|2-F|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)[@reddyGeneticFunctionalDrivers2017]|| |
|
| 367 | 367 | |
| 368 | 368 | |
| 369 | 369 | # References |