5a21d8fa2384fd82b4513b774d98520be85108cf
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| ... | ... | @@ -135,6 +135,33 @@ BL, BL-exome, 59 |
| 135 | 135 | BL-exome, Love 2012, 59 |
| 136 | 136 | BL, BL-RNA-seq, 19 |
| 137 | 137 | BL-RNA-seq, Schmitz 2012, 19 |
| 138 | +``` |
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| 139 | + |
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| 140 | +## Gene lists |
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| 141 | + |
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| 142 | + |
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| 143 | +|Entity|Tier 1 (high-confidence)|Tier 2 (low-confidence)| |
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| 144 | +|:-:|:-:|:-:| |
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| 145 | +|BL|[29 genes](BL_genes#tier-1-bl-genes)|[152 genes](BL_genes#tier-2-bl-genes)| |
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| 146 | +|DLBCL|[127 genes](DLBCL_genes#tier-1-dlbcl-genes)|[215 genes](DLBCL_genes#tier-2-dlbcl-genes)| |
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| 147 | +|FL|[66 genes](FL_genes#tier-1-fl-genes)|[50 genes](FL_genes#tier-2-fl-genes)| |
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| 148 | +|PMBL|[76 genes](PMBL_genes#tier-1-pmbl-genes)|[82 genes](PMBL_genes#tier-2-pmbl-genes)| |
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| 149 | +|MCL|[23 genes](MCL_genes#tier-1-mcl-genes)|[46 genes](MCL_genes#tier-2-mcl-genes)| |
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| 150 | +|MZL|[42 genes](MZL_genes#tier-1-mzl-genes)|[74 genes](MZL_genes#tier-2-mzl-genes)| |
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| 151 | + |
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| 152 | +\* *PMBL gene list includes genes attributed to classical Hodgkin lymphoma or marginal grey-zone lymphoma* |
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| 153 | + |
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| 154 | +```mermaid |
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| 155 | +--- |
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| 156 | +config: |
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| 157 | + sankey: |
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| 158 | + showValues: false |
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| 159 | + linkColor: target |
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| 160 | + width: 750 |
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| 161 | + height: 1300 |
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| 162 | + nodeAlignment: left |
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| 163 | +--- |
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| 164 | +sankey-beta |
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| 138 | 165 | Zhang 2014, MCL Tier 1, 2 |
| 139 | 166 | Zhang 2014, MCL Tier 2, 26 |
| 140 | 167 | Bea 2013, MCL Tier 1, 11 |
| ... | ... | @@ -218,20 +245,6 @@ PMBL-exome, Mottok 2019, 21 |
| 218 | 245 | |
| 219 | 246 | ``` |
| 220 | 247 | |
| 221 | -## Gene lists |
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| 222 | - |
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| 223 | - |
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| 224 | -|Entity|Tier 1 (high-confidence)|Tier 2 (low-confidence)| |
|
| 225 | -|:-:|:-:|:-:| |
|
| 226 | -|BL|[29 genes](BL_genes#tier-1-bl-genes)|[152 genes](BL_genes#tier-2-bl-genes)| |
|
| 227 | -|DLBCL|[127 genes](DLBCL_genes#tier-1-dlbcl-genes)|[215 genes](DLBCL_genes#tier-2-dlbcl-genes)| |
|
| 228 | -|FL|[66 genes](FL_genes#tier-1-fl-genes)|[50 genes](FL_genes#tier-2-fl-genes)| |
|
| 229 | -|PMBL|[76 genes](PMBL_genes#tier-1-pmbl-genes)|[82 genes](PMBL_genes#tier-2-pmbl-genes)| |
|
| 230 | -|MCL|[23 genes](MCL_genes#tier-1-mcl-genes)|[46 genes](MCL_genes#tier-2-mcl-genes)| |
|
| 231 | -|MZL|[42 genes](MZL_genes#tier-1-mzl-genes)|[74 genes](MZL_genes#tier-2-mzl-genes)| |
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| 232 | - |
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| 233 | -\* *PMBL gene list includes genes attributed to classical Hodgkin lymphoma or marginal grey-zone lymphoma* |
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| 234 | - |
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| 235 | 248 | ## B-cell Lymphoma aSHM targets |
| 236 | 249 | |
| 237 | 250 | [hg19 coordinates](ashm) |