BSCL2.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_BSCL2.md]]
22
+[[include:tables/mermaid_BSCL2.md]]
23 23
24 24
## References
25 25
BTAF1.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_BTAF1.md]]
22
+[[include:tables/mermaid_BTAF1.md]]
23 23
24 24
## References
25 25
BTBD3.md
... ...
@@ -62,7 +62,7 @@ Mutations in this gene were first described in DLBCL in 2013[@zhangGeneticHetero
62 62
[Reddy_3918T](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Reddy/igv_reports/Reddy_3918T.html)
63 63
[Reddy_759T](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Reddy/igv_reports/Reddy_759T.html)
64 64
65
-[[include:mermaid_BTBD3.md]]
65
+[[include:tables/mermaid_BTBD3.md]]
66 66
67 67
## References
68 68
BTG1.md
... ...
@@ -83,7 +83,7 @@ Another study demonstrated that specific BTG1 mutations afford germinal center (
83 83
<!-- BL: burkhardtClinicalRelevanceMolecular2022b -->
84 84
<!-- BL: burkhardtClinicalRelevanceMolecular2022b -->
85 85
86
-[[include:mermaid_BTG1.md]]
86
+[[include:tables/mermaid_BTG1.md]]
87 87
88 88
## References
89 89
BTG2.md
... ...
@@ -66,7 +66,7 @@ BTG2 is one of [a number of genes](https://github.com/morinlab/LLMPP/wiki/ashm)
66 66
[323](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Love/323_reports.html)
67 67
[323](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Love/323_reports.html)
68 68
69
-[[include:mermaid_BTG2.md]]
69
+[[include:tables/mermaid_BTG2.md]]
70 70
71 71
## References
72 72
BTK.md
... ...
@@ -37,7 +37,7 @@ Driver mutations affecting this gene in FL/DLBCL have been experimentally demons
37 37
<!-- FL: krysiakRecurrentSomaticMutations2017b -->
38 38
<!-- DLBCL: albuquerqueEnhancingKnowledgeDiscovery2017a -->
39 39
40
-[[include:mermaid_BTK.md]]
40
+[[include:tables/mermaid_BTK.md]]
41 41
42 42
## References
43 43
C12orf35.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_C12orf35.md]]
22
+[[include:tables/mermaid_C12orf35.md]]
23 23
24 24
## References
25 25
C6orf103.md
... ...
@@ -22,7 +22,7 @@ nocite: |
22 22
|:------:|:----:|:----:|
23 23
24 24
25
-[[include:mermaid_C6orf103.md]]
25
+[[include:tables/mermaid_C6orf103.md]]
26 26
27 27
## References
28 28
C9.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_C9.md]]
22
+[[include:tables/mermaid_C9.md]]
23 23
24 24
## References
25 25
CAD.md
... ...
@@ -61,6 +61,6 @@ Due to [minimal support](CAD#representative-mutation) in the original primary da
61 61
[479](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Love/479_reports.html)
62 62
[479](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Love/479_reports.html)
63 63
64
-[[include:mermaid_CAD.md]]
64
+[[include:tables/mermaid_CAD.md]]
65 65
66 66
## References
CADPS2.md
... ...
@@ -46,7 +46,7 @@ Mutations in this gene were first described in DLBCL in 2021 by Hübschmann et a
46 46
[SP124971](https://www.bcgsc.ca/downloads/morinlab/GAMBL/MALY/SP124971.html)
47 47
[SP192970](https://www.bcgsc.ca/downloads/morinlab/GAMBL/MALY/SP192970.html)
48 48
49
-[[include:mermaid_CADPS2.md]]
49
+[[include:tables/mermaid_CADPS2.md]]
50 50
51 51
## References
52 52
CAMTA1.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_CAMTA1.md]]
22
+[[include:tables/mermaid_CAMTA1.md]]
23 23
24 24
## References
25 25
CAPN5.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_CAPN5.md]]
22
+[[include:tables/mermaid_CAPN5.md]]
23 23
24 24
## References
25 25
CAPN7.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_CAPN7.md]]
22
+[[include:tables/mermaid_CAPN7.md]]
23 23
24 24
## References
25 25
CARD11.md
... ...
@@ -67,7 +67,7 @@ The functional effect of CARD11 mutations in DLBCL was explored in the original
67 67
<!-- MZL: yanBCRTLRSignaling2012a -->
68 68
<!-- DLBCL: lenzOncogenicCARD11Mutations2008 -->
69 69
70
-[[include:mermaid_CARD11.md]]
70
+[[include:tables/mermaid_CARD11.md]]
71 71
72 72
73 73
## References
CASP8.md
... ...
@@ -38,7 +38,7 @@ Mutations in this gene were first described in DLBCL in 2017 by Reddy et al.[@re
38 38
## Expression
39 39
![](images/gene_expression/CASP8_by_pathology.svg)
40 40
41
-[[include:mermaid_CASP8.md]]
41
+[[include:tables/mermaid_CASP8.md]]
42 42
43 43
## References
44 44
CBFA2T3.md
... ...
@@ -27,7 +27,7 @@ nocite: |
27 27
|MCL|GAMBL Genome |0.585 |
28 28
29 29
30
-[[include:mermaid_CBFA2T3.md]]
30
+[[include:tables/mermaid_CBFA2T3.md]]
31 31
32 32
## References
33 33
CBLB.md
... ...
@@ -75,7 +75,7 @@ Mutations in this gene were first described in DLBCL in 2017 by Reddy et al.[@re
75 75
[Reddy_3999T](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Reddy/igv_reports/Reddy_3999T.html)
76 76
[Reddy_4000T](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Reddy/igv_reports/Reddy_4000T.html)
77 77
78
-[[include:mermaid_CBLB.md]]
78
+[[include:tables/mermaid_CBLB.md]]
79 79
80 80
## References
81 81
CBX3.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_CBX3.md]]
22
+[[include:tables/mermaid_CBX3.md]]
23 23
24 24
## References
25 25
CCDC132.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_CCDC132.md]]
22
+[[include:tables/mermaid_CCDC132.md]]
23 23
24 24
## References
25 25
CCDC46.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_CCDC46.md]]
22
+[[include:tables/mermaid_CCDC46.md]]
23 23
24 24
## References
25 25
CCDC97.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_CCDC97.md]]
22
+[[include:tables/mermaid_CCDC97.md]]
23 23
24 24
## References
25 25
CCL4.md
... ...
@@ -36,6 +36,6 @@ nocite: |
36 36
<!-- ORIGIN: chapuyMolecularSubtypesDiffuse2018b -->
37 37
<!-- DLBCL: chapuyMolecularSubtypesDiffuse2018b -->
38 38
39
-[[include:mermaid_CCL4.md]]
39
+[[include:tables/mermaid_CCL4.md]]
40 40
41 41
## References
CCND1.md
... ...
@@ -36,6 +36,6 @@ nocite: |
36 36
<!-- ORIGIN: beaLandscapeSomaticMutations2013 -->
37 37
<!-- MCL: beaLandscapeSomaticMutations2013 -->
38 38
39
-[[include:mermaid_CCND1.md]]
39
+[[include:tables/mermaid_CCND1.md]]
40 40
41 41
## References
CCND3.md
... ...
@@ -88,7 +88,7 @@ The dysregulation of CCND3 due to these mutations contributes to the oncogenic p
88 88
<!-- MZL: jalladesExomeSequencingIdentifies2017 -->
89 89
<!-- PMBL: deschGenotypingCirculatingTumor2020 -->
90 90
91
-[[include:mermaid_CCND3.md]]
91
+[[include:tables/mermaid_CCND3.md]]
92 92
93 93
## References
94 94
CCNF.md
... ...
@@ -32,6 +32,6 @@ nocite: |
32 32
<!-- ORIGIN: abateDistinctViralMutational2015a -->
33 33
<!-- BL: abateDistinctViralMutational2015a -->
34 34
35
-[[include:mermaid_CCNF.md]]
35
+[[include:tables/mermaid_CCNF.md]]
36 36
37 37
## References
CCT6B.md
... ...
@@ -56,6 +56,6 @@ Due to [minimal support](CCT6B#representative-mutations) in the original primary
56 56
[515](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Love/515_reports.html)
57 57
[670](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Love/670_reports.html)
58 58
59
-[[include:mermaid_CCT6B.md]]
59
+[[include:tables/mermaid_CCT6B.md]]
60 60
61 61
## References
CD22.md
... ...
@@ -35,7 +35,7 @@ Mutations in this gene were first described in DLBCL in 2017 by Reddy et al.[@re
35 35
## Expression
36 36
![](images/gene_expression/CD22_by_pathology.svg)
37 37
38
-[[include:mermaid_CD22.md]]
38
+[[include:tables/mermaid_CD22.md]]
39 39
40 40
## References
41 41
CD274.md
... ...
@@ -37,7 +37,7 @@ Although rare, mutations have the potential to impact PD-L1 expression and could
37 37
## Expression
38 38
![](images/gene_expression/CD274_by_pathology.svg)
39 39
40
-[[include:mermaid_CD274.md]]
40
+[[include:tables/mermaid_CD274.md]]
41 41
42 42
## References
43 43
CD44.md
... ...
@@ -41,6 +41,6 @@ nocite: |
41 41
<!-- ORIGIN: arthurGenomewideDiscoverySomatic2018 -->
42 42
<!-- DLBCL: arthurGenomewideDiscoverySomatic2018 -->
43 43
44
-[[include:mermaid_CD44.md]]
44
+[[include:tables/mermaid_CD44.md]]
45 45
46 46
## References
CD58.md
... ...
@@ -35,7 +35,7 @@ This is often accompanied by mutations in the β2-Microglobulin gene, which furt
35 35
## Expression
36 36
![](images/gene_expression/CD58_by_pathology.svg)
37 37
38
-[[include:mermaid_CD58.md]]
38
+[[include:tables/mermaid_CD58.md]]
39 39
40 40
## References
41 41
CD70.md
... ...
@@ -54,7 +54,7 @@ Driver mutations affecting this gene in DLBCL have been experimentally demonstra
54 54
<!-- DLBCL: morinFrequentMutationHistonemodifying2011 -->
55 55
<!-- FL: russler-germainMutationsAssociatedProgression2023b -->
56 56
57
-[[include:mermaid_CD70.md]]
57
+[[include:tables/mermaid_CD70.md]]
58 58
59 59
## References
60 60
CD74.md
... ...
@@ -36,6 +36,6 @@ nocite: |
36 36
<!-- ORIGIN: arthurGenomewideDiscoverySomatic2018 -->
37 37
<!-- DLBCL: arthurGenomewideDiscoverySomatic2018 -->
38 38
39
-[[include:mermaid_CD74.md]]
39
+[[include:tables/mermaid_CD74.md]]
40 40
41 41
## References
CD79A.md
... ...
@@ -43,7 +43,7 @@ nocite: |
43 43
<!-- BL: burkhardtClinicalRelevanceMolecular2022b -->
44 44
<!-- MZL: rossiCodingGenomeSplenic2012c -->
45 45
46
-[[include:mermaid_CD79A.md]]
46
+[[include:tables/mermaid_CD79A.md]]
47 47
48 48
## References
49 49
CD79B.md
... ...
@@ -79,7 +79,7 @@ Mutations at Y196 enhance B-cell receptor (BCR) signaling by preventing the nega
79 79
&starf; &starf; &starf; &star; &star;
80 80
81 81
82
-[[include:mermaid_CD79B.md]]
82
+[[include:tables/mermaid_CD79B.md]]
83 83
84 84
## References
85 85
<!-- ORIGIN: morinFrequentMutationHistonemodifying2011 -->
CD83.md
... ...
@@ -59,7 +59,7 @@ Mutations in this gene were first described in DLBCL in 2013 by Morin et al[@mor
59 59
&starf; &starf; &starf; &starf; &star;
60 60
61 61
62
-[[include:mermaid_CD83.md]]
62
+[[include:tables/mermaid_CD83.md]]
63 63
64 64
## References
65 65
<!-- ORIGIN: morinMutationalStructuralAnalysis2013 -->
CD9B.md
... ...
@@ -22,7 +22,7 @@ nocite: |
22 22
|:------:|:----:|:----:|
23 23
24 24
25
-[[include:mermaid_CD9B.md]]
25
+[[include:tables/mermaid_CD9B.md]]
26 26
27 27
## References
28 28
CDC123.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_CDC123.md]]
22
+[[include:tables/mermaid_CDC123.md]]
23 23
24 24
## References
25 25
CDC27.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_CDC27.md]]
22
+[[include:tables/mermaid_CDC27.md]]
23 23
24 24
## References
25 25
CDC42BPB.md
... ...
@@ -29,7 +29,7 @@ Mutations in this gene were first described in FL in 2021 by Hübschmann et al.[
29 29
[SP194134](https://www.bcgsc.ca/downloads/morinlab/GAMBL/MALY/SP194134.html)
30 30
31 31
32
-[[include:mermaid_CDC42BPB.md]]
32
+[[include:tables/mermaid_CDC42BPB.md]]
33 33
34 34
## References
35 35
CDC73.md
... ...
@@ -63,7 +63,7 @@ Mutations in this gene were first described in BL in 2012 by Love et al[@loveGen
63 63
[1065](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Love/1065_reports.html)
64 64
[847](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Love/847_reports.html)
65 65
66
-[[include:mermaid_CDC73.md]]
66
+[[include:tables/mermaid_CDC73.md]]
67 67
68 68
## References
69 69
CDH1.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_CDH1.md]]
22
+[[include:tables/mermaid_CDH1.md]]
23 23
24 24
## References
25 25
CDH10.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_CDH10.md]]
22
+[[include:tables/mermaid_CDH10.md]]
23 23
24 24
## References
25 25
CDH17.md
... ...
@@ -54,6 +54,6 @@ Due to [minimal support](CDH17#representative-mutations) in the original primary
54 54
[1102](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Love/1102_reports.html)
55 55
[322](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Love/322_reports.html)
56 56
57
-[[include:mermaid_CDH17.md]]
57
+[[include:tables/mermaid_CDH17.md]]
58 58
59 59
## References
CDH2.md
... ...
@@ -28,7 +28,7 @@ nocite: |
28 28
|MCL|GAMBL Genome |0.585 |
29 29
30 30
31
-[[include:mermaid_CDH2.md]]
31
+[[include:tables/mermaid_CDH2.md]]
32 32
33 33
## References
34 34
CDH5.md
... ...
@@ -27,7 +27,7 @@ nocite: |
27 27
|FL|GAMBL Exome |0.573 |
28 28
29 29
30
-[[include:mermaid_CDH5.md]]
30
+[[include:tables/mermaid_CDH5.md]]
31 31
32 32
## References
33 33
CDH7.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_CDH7.md]]
22
+[[include:tables/mermaid_CDH7.md]]
23 23
24 24
## References
25 25
CDH8.md
... ...
@@ -33,6 +33,6 @@ nocite: |
33 33
<!-- ORIGIN: zhangGenomicLandscapeMantle2014 -->
34 34
<!-- MCL: zhangGenomicLandscapeMantle2014 -->
35 35
36
-[[include:mermaid_CDH8.md]]
36
+[[include:tables/mermaid_CDH8.md]]
37 37
38 38
## References
CDH9.md
... ...
@@ -42,6 +42,6 @@ nocite: |
42 42
[RG034](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Morin_2013/RG034.html)
43 43
[RG065](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Morin_2013/RG065.html)
44 44
45
-[[include:mermaid_CDH9.md]]
45
+[[include:tables/mermaid_CDH9.md]]
46 46
47 47
## References
CDK3.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_CDK3.md]]
22
+[[include:tables/mermaid_CDK3.md]]
23 23
24 24
## References
25 25
CDKN1A.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_CDKN1A.md]]
22
+[[include:tables/mermaid_CDKN1A.md]]
23 23
24 24
## References
25 25
CDKN2A.md
... ...
@@ -47,7 +47,7 @@ Driver mutations affecting this gene in DLBCL have been experimentally demonstra
47 47
48 48
![](images/gene_expression/CDKN2A_by_pathology.svg)
49 49
50
-[[include:mermaid_CDKN2A.md]]
50
+[[include:tables/mermaid_CDKN2A.md]]
51 51
52 52
## References
53 53
CDKN2C.md
... ...
@@ -34,6 +34,6 @@ nocite: |
34 34
<!-- ORIGIN: thomasGeneticSubgroupsInform2023 -->
35 35
<!-- BL: thomasGeneticSubgroupsInform2023 -->
36 36
37
-[[include:mermaid_CDKN2C.md]]
37
+[[include:tables/mermaid_CDKN2C.md]]
38 38
39 39
## References
CECR1.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_CECR1.md]]
22
+[[include:tables/mermaid_CECR1.md]]
23 23
24 24
## References
25 25
CELSR2.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_CELSR2.md]]
22
+[[include:tables/mermaid_CELSR2.md]]
23 23
24 24
## References
25 25
CEP164.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_CEP164.md]]
22
+[[include:tables/mermaid_CEP164.md]]
23 23
24 24
## References
25 25
CGN.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_CGN.md]]
22
+[[include:tables/mermaid_CGN.md]]
23 23
24 24
## References
25 25
CHD1.md
... ...
@@ -39,7 +39,7 @@ Mutations in this gene were first described in DLBCL in 2017 by Reddy et al.[@re
39 39
## Expression
40 40
![](images/gene_expression/CHD1_by_pathology.svg)
41 41
42
-[[include:mermaid_CHD1.md]]
42
+[[include:tables/mermaid_CHD1.md]]
43 43
44 44
## References
45 45
CHD3.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_CHD3.md]]
22
+[[include:tables/mermaid_CHD3.md]]
23 23
24 24
## References
25 25
CHD4.md
... ...
@@ -34,6 +34,6 @@ nocite: |
34 34
<!-- ORIGIN: burkhardtClinicalRelevanceMolecular2022b -->
35 35
<!-- BL: burkhardtClinicalRelevanceMolecular2022b -->
36 36
37
-[[include:mermaid_CHD4.md]]
37
+[[include:tables/mermaid_CHD4.md]]
38 38
39 39
## References
CHD8.md
... ...
@@ -97,7 +97,7 @@ nocite: |
97 97
[Reddy_3992T](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Reddy/igv_reports/Reddy_3992T.html)
98 98
[Reddy_830T](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Reddy/igv_reports/Reddy_830T.html)
99 99
100
-[[include:mermaid_CHD8.md]]
100
+[[include:tables/mermaid_CHD8.md]]
101 101
102 102
## References
103 103
CHEK2.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_CHEK2.md]]
22
+[[include:tables/mermaid_CHEK2.md]]
23 23
24 24
## References
25 25
CHMP4C.md
... ...
@@ -25,7 +25,7 @@ nocite: |
25 25
|DLBCL|GAMBL Genome |0.376 |
26 26
27 27
28
-[[include:mermaid_CHMP4C.md]]
28
+[[include:tables/mermaid_CHMP4C.md]]
29 29
30 30
## References
31 31
CHRM5.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_CHRM5.md]]
22
+[[include:tables/mermaid_CHRM5.md]]
23 23
24 24
## References
25 25
CHST2.md
... ...
@@ -75,7 +75,7 @@ Mutations in this gene were first described in DLBCL in 2017 by Reddy et al.[@re
75 75
[Reddy_3917T](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Reddy/igv_reports/Reddy_3917T.html)
76 76
[Reddy_3998T](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Reddy/igv_reports/Reddy_3998T.html)
77 77
78
-[[include:mermaid_CHST2.md]]
78
+[[include:tables/mermaid_CHST2.md]]
79 79
80 80
## References
81 81
CIC.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_CIC.md]]
22
+[[include:tables/mermaid_CIC.md]]
23 23
24 24
## References
25 25
CIITA.md
... ...
@@ -44,7 +44,7 @@ Driver mutations affecting this gene in DLBCL have been experimentally demonstra
44 44
## Expression
45 45
![](images/gene_expression/CIITA_by_pathology.svg)
46 46
47
-[[include:mermaid_CIITA.md]]
47
+[[include:tables/mermaid_CIITA.md]]
48 48
49 49
## References
50 50
CILP.md
... ...
@@ -33,6 +33,6 @@ nocite: |
33 33
<!-- ORIGIN: russler-germainMutationsAssociatedProgression2023a -->
34 34
<!-- FL: russler-germainMutationsAssociatedProgression2023b -->
35 35
36
-[[include:mermaid_CILP.md]]
36
+[[include:tables/mermaid_CILP.md]]
37 37
38 38
## References
CISH.md
... ...
@@ -26,7 +26,7 @@ nocite: |
26 26
|FL|GAMBL Exome |0.573 |
27 27
28 28
29
-[[include:mermaid_CISH.md]]
29
+[[include:tables/mermaid_CISH.md]]
30 30
31 31
## References
32 32
CLGN.md
... ...
@@ -27,7 +27,7 @@ nocite: |
27 27
|MCL|GAMBL Genome |0.585 |
28 28
29 29
30
-[[include:mermaid_CLGN.md]]
30
+[[include:tables/mermaid_CLGN.md]]
31 31
32 32
## References
33 33
CNBP.md
... ...
@@ -22,7 +22,7 @@ nocite: |
22 22
|:------:|:----:|:----:|
23 23
24 24
25
-[[include:mermaid_CNBP.md]]
25
+[[include:tables/mermaid_CNBP.md]]
26 26
27 27
## References
28 28
CNGA4.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_CNGA4.md]]
22
+[[include:tables/mermaid_CNGA4.md]]
23 23
24 24
## References
25 25
CNKSR2.md
... ...
@@ -28,7 +28,7 @@ nocite: |
28 28
|MCL|GAMBL Genome |0.585 |
29 29
30 30
31
-[[include:mermaid_CNKSR2.md]]
31
+[[include:tables/mermaid_CNKSR2.md]]
32 32
33 33
## References
34 34
CNOT2.md
... ...
@@ -42,7 +42,7 @@ Mutations in this gene were first described in DLBCL in 2021 by Hübschmann et a
42 42
[SP116663](https://www.bcgsc.ca/downloads/morinlab/GAMBL/MALY/SP116663.html)
43 43
[SP192997](https://www.bcgsc.ca/downloads/morinlab/GAMBL/MALY/SP192997.html)
44 44
45
-[[include:mermaid_CNOT2.md]]
45
+[[include:tables/mermaid_CNOT2.md]]
46 46
47 47
## References
48 48
CNOT6.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_CNOT6.md]]
22
+[[include:tables/mermaid_CNOT6.md]]
23 23
24 24
## References
25 25
CNP.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_CNP.md]]
22
+[[include:tables/mermaid_CNP.md]]
23 23
24 24
## References
25 25
CNTN6.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_CNTN6.md]]
22
+[[include:tables/mermaid_CNTN6.md]]
23 23
24 24
## References
25 25
CNTNAP5.md
... ...
@@ -42,7 +42,7 @@ Mutations in this gene were first described in DLBCL in 2013 by Morin et al.[@mo
42 42
[RG115](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Morin_2013/RG115.html)
43 43
[RG136](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Morin_2013/RG136.html)
44 44
45
-[[include:mermaid_CNTNAP5.md]]
45
+[[include:tables/mermaid_CNTNAP5.md]]
46 46
47 47
## References
48 48
COL11A1.md
... ...
@@ -37,6 +37,6 @@ nocite: |
37 37
<!-- ORIGIN: zhangGenomicLandscapeMantle2014 -->
38 38
<!-- MCL: zhangGenomicLandscapeMantle2014 -->
39 39
40
-[[include:mermaid_COL11A1.md]]
40
+[[include:tables/mermaid_COL11A1.md]]
41 41
42 42
## References
COL12A1.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_COL12A1.md]]
22
+[[include:tables/mermaid_COL12A1.md]]
23 23
24 24
## References
25 25
COL16A1.md
... ...
@@ -37,6 +37,6 @@ nocite: |
37 37
<!-- ORIGIN: zhangGenomicLandscapeMantle2014 -->
38 38
<!-- MCL: zhangGenomicLandscapeMantle2014 -->
39 39
40
-[[include:mermaid_COL16A1.md]]
40
+[[include:tables/mermaid_COL16A1.md]]
41 41
42 42
## References
COL4A2.md
... ...
@@ -57,6 +57,6 @@ Due to [minimal support](COL4A2#representative-mutations) in the original primar
57 57
[747](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Love/747_reports.html)
58 58
59 59
60
-[[include:mermaid_COL4A2.md]]
60
+[[include:tables/mermaid_COL4A2.md]]
61 61
62 62
## References
COL5A2.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_COL5A2.md]]
22
+[[include:tables/mermaid_COL5A2.md]]
23 23
24 24
## References
25 25
COQ7.md
... ...
@@ -41,6 +41,6 @@ nocite: |
41 41
[DLBCL-RICOVER_1032-Tumor](https://bcgsc.ca/downloads/morinlab/GAMBL/Chapuy_2018/DLBCL-RICOVER_1032-Tumor.html)
42 42
[DLBCL-RICOVER_181-Tumor](https://bcgsc.ca/downloads/morinlab/GAMBL/Chapuy_2018/DLBCL-RICOVER_181-Tumor.html)
43 43
44
-[[include:mermaid_COQ7.md]]
44
+[[include:tables/mermaid_COQ7.md]]
45 45
46 46
## References
CORO2A.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_CORO2A.md]]
22
+[[include:tables/mermaid_CORO2A.md]]
23 23
24 24
## References
25 25
CORO7.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_CORO7.md]]
22
+[[include:tables/mermaid_CORO7.md]]
23 23
24 24
## References
25 25
CPNE8.md
... ...
@@ -42,7 +42,7 @@ Mutations in this gene were first described in FL in 2021 by Hübschmann et al.[
42 42
[SP193150](https://www.bcgsc.ca/downloads/morinlab/GAMBL/MALY/SP193150.html)
43 43
[SP116720](https://www.bcgsc.ca/downloads/morinlab/GAMBL/MALY/SP116720.html)
44 44
45
-[[include:mermaid_CPNE8.md]]
45
+[[include:tables/mermaid_CPNE8.md]]
46 46
47 47
## References
48 48
CPS1.md
... ...
@@ -27,7 +27,7 @@ nocite: |
27 27
|FL|GAMBL Exome |1.146 |
28 28
29 29
30
-[[include:mermaid_CPS1.md]]
30
+[[include:tables/mermaid_CPS1.md]]
31 31
32 32
## References
33 33
CPXM2.md
... ...
@@ -35,6 +35,6 @@ nocite: |
35 35
<!-- ORIGIN: burkhardtClinicalRelevanceMolecular2022b -->
36 36
<!-- BL: burkhardtClinicalRelevanceMolecular2022b -->
37 37
38
-[[include:mermaid_CPXM2.md]]
38
+[[include:tables/mermaid_CPXM2.md]]
39 39
40 40
## References
CREBBP.md
... ...
@@ -101,7 +101,7 @@ Source[@loveGeneticLandscapeMutations2012]
101 101
[745](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Love/745_reports.html)
102 102
[851](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Love/851_reports.html)
103 103
104
-[[include:mermaid_CREBBP.md]]
104
+[[include:tables/mermaid_CREBBP.md]]
105 105
106 106
# References
107 107
CRELD2.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_CRELD2.md]]
22
+[[include:tables/mermaid_CRELD2.md]]
23 23
24 24
## References
25 25
CRIP1.md
... ...
@@ -41,6 +41,6 @@ nocite: |
41 41
[DLBCL-RICOVER_361-Tumor](https://bcgsc.ca/downloads/morinlab/GAMBL/Chapuy_2018/DLBCL-RICOVER_361-Tumor.html)
42 42
[DLBCL-RICOVER_950-Tumor](https://bcgsc.ca/downloads/morinlab/GAMBL/Chapuy_2018/DLBCL-RICOVER_950-Tumor.html)
43 43
44
-[[include:mermaid_CRIP1.md]]
44
+[[include:tables/mermaid_CRIP1.md]]
45 45
46 46
## References
CRTC3.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_CRTC3.md]]
22
+[[include:tables/mermaid_CRTC3.md]]
23 23
24 24
## References
25 25
CRYBG3.md
... ...
@@ -28,7 +28,7 @@ nocite: |
28 28
|MCL|GAMBL Genome |2.339 |
29 29
30 30
31
-[[include:mermaid_CRYBG3.md]]
31
+[[include:tables/mermaid_CRYBG3.md]]
32 32
33 33
## References
34 34
CSF2RB.md
... ...
@@ -26,7 +26,7 @@ nocite: |
26 26
|DLBCL|GAMBL Genome |0.376 |
27 27
28 28
29
-[[include:mermaid_CSF2RB.md]]
29
+[[include:tables/mermaid_CSF2RB.md]]
30 30
31 31
## References
32 32
CSNK1A1.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_CSNK1A1.md]]
22
+[[include:tables/mermaid_CSNK1A1.md]]
23 23
24 24
## References
25 25
CSNK2A1.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_CSNK2A1.md]]
22
+[[include:tables/mermaid_CSNK2A1.md]]
23 23
24 24
## References
25 25
CST7.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_CST7.md]]
22
+[[include:tables/mermaid_CST7.md]]
23 23
24 24
## References
25 25
CTCF.md
... ...
@@ -51,6 +51,6 @@ nocite: |
51 51
52 52
53 53
54
-[[include:mermaid_CTCF.md]]
54
+[[include:tables/mermaid_CTCF.md]]
55 55
56 56
## References
CTNNA2.md
... ...
@@ -37,6 +37,6 @@ nocite: |
37 37
<!-- ORIGIN: zhangGenomicLandscapeMantle2014 -->
38 38
<!-- MCL: zhangGenomicLandscapeMantle2014 -->
39 39
40
-[[include:mermaid_CTNNA2.md]]
40
+[[include:tables/mermaid_CTNNA2.md]]
41 41
42 42
## References
CTNNA3.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_CTNNA3.md]]
22
+[[include:tables/mermaid_CTNNA3.md]]
23 23
24 24
## References
25 25
CTSS.md
... ...
@@ -43,6 +43,6 @@ Driver mutations affecting this gene in FL have been experimentally demonstrated
43 43
<!-- ORIGIN: barariaCathepsinAlterationsInduce2020c -->
44 44
<!-- FL: barariaCathepsinAlterationsInduce2020c -->
45 45
46
-[[include:mermaid_CTSS.md]]
46
+[[include:tables/mermaid_CTSS.md]]
47 47
48 48
## References
CXCR4.md
... ...
@@ -58,7 +58,7 @@ Driver mutations affecting this gene in DLBCL have been experimentally demonstra
58 58
&starf; &starf; &starf; &starf; &starf;
59 59
60 60
61
-[[include:mermaid_CXCR4.md]]
61
+[[include:tables/mermaid_CXCR4.md]]
62 62
63 63
## References
64 64
CXCR5.md
... ...
@@ -45,7 +45,7 @@ CXCR5 is one of [a number of genes](https://github.com/morinlab/LLMPP/wiki/ashm)
45 45
<!-- PMBL: mottokIntegrativeGenomicAnalysis2019b -->
46 46
<!-- DLBCL: schmitzGeneticsPathogenesisDiffuse2018a -->
47 47
48
-[[include:mermaid_CXCR5.md]]
48
+[[include:tables/mermaid_CXCR5.md]]
49 49
50 50
## References
51 51
CYB5D1.md
... ...
@@ -53,6 +53,6 @@ nocite: |
53 53
[513](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Love/513_reports.html)
54 54
[670](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Love/670_reports.html)
55 55
56
-[[include:mermaid_CYB5D1.md]]
56
+[[include:tables/mermaid_CYB5D1.md]]
57 57
58 58
## References
CYP24A1.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_CYP24A1.md]]
22
+[[include:tables/mermaid_CYP24A1.md]]
23 23
24 24
## References
25 25
CYP2A6.md
... ...
@@ -33,6 +33,6 @@ nocite: |
33 33
<!-- ORIGIN: russler-germainMutationsAssociatedProgression2023a -->
34 34
<!-- FL: russler-germainMutationsAssociatedProgression2023b -->
35 35
36
-[[include:mermaid_CYP2A6.md]]
36
+[[include:tables/mermaid_CYP2A6.md]]
37 37
38 38
## References
CYP2C18.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_CYP2C18.md]]
22
+[[include:tables/mermaid_CYP2C18.md]]
23 23
24 24
## References
25 25
CYP4F22.md
... ...
@@ -56,7 +56,7 @@ Due to [minimal support](CYP4F22#representative-mutation) in the original primar
56 56
[747](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Love/747_reports.html)
57 57
58 58
59
-[[include:mermaid_CYP4F22.md]]
59
+[[include:tables/mermaid_CYP4F22.md]]
60 60
61 61
## References
62 62
CYTSB.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_CYTSB.md]]
22
+[[include:tables/mermaid_CYTSB.md]]
23 23
24 24
## References
25 25
CYYR1.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_CYYR1.md]]
22
+[[include:tables/mermaid_CYYR1.md]]
23 23
24 24
## References
25 25
DAZAP1.md
... ...
@@ -45,7 +45,7 @@ This gene has some recurrent sites of mutations (hot spots). The mutation patter
45 45
## Expression
46 46
![](images/gene_expression/DAZAP1_by_pathology.svg)
47 47
48
-[[include:mermaid_DAZAP1.md]]
48
+[[include:tables/mermaid_DAZAP1.md]]
49 49
50 50
## References
51 51
DCAF6.md
... ...
@@ -83,7 +83,7 @@ Mutations in this gene were first described in DLBCL in 2017 by Reddy et al.[@re
83 83
[Reddy_3987T](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Reddy/igv_reports/Reddy_3987T.html)
84 84
[Reddy_705T](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Reddy/igv_reports/Reddy_705T.html)
85 85
86
-[[include:mermaid_DCAF6.md]]
86
+[[include:tables/mermaid_DCAF6.md]]
87 87
88 88
## References
89 89
DCHS1.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_DCHS1.md]]
22
+[[include:tables/mermaid_DCHS1.md]]
23 23
24 24
## References
25 25
DCP1B.md
... ...
@@ -27,7 +27,7 @@ nocite: |
27 27
|MCL|GAMBL Genome |0.585 |
28 28
29 29
30
-[[include:mermaid_DCP1B.md]]
30
+[[include:tables/mermaid_DCP1B.md]]
31 31
32 32
## References
33 33
DDB1.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_DDB1.md]]
22
+[[include:tables/mermaid_DDB1.md]]
23 23
24 24
## References
25 25
DDX10.md
... ...
@@ -67,6 +67,6 @@ nocite: |
67 67
[Reddy_3982T](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Reddy/igv_reports/Reddy_3982T.html)
68 68
69 69
70
-[[include:mermaid_DDX10.md]]
70
+[[include:tables/mermaid_DDX10.md]]
71 71
72 72
## References
DDX3X.md
... ...
@@ -53,7 +53,7 @@ Driver mutations affecting this gene in DLBCL/BL have been experimentally demons
53 53
<!-- BL: schmitzBurkittLymphomaPathogenesis2012 -->
54 54
<!-- PMBL: mottokIntegrativeGenomicAnalysis2019b -->
55 55
56
-[[include:mermaid_DDX3X.md]]
56
+[[include:tables/mermaid_DDX3X.md]]
57 57
58 58
## References
59 59
DGCR8.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_DGCR8.md]]
22
+[[include:tables/mermaid_DGCR8.md]]
23 23
24 24
## References
25 25
DGKB.md
... ...
@@ -28,7 +28,7 @@ nocite: |
28 28
|MCL|GAMBL Genome |0.585 |
29 29
30 30
31
-[[include:mermaid_DGKB.md]]
31
+[[include:tables/mermaid_DGKB.md]]
32 32
33 33
## References
34 34
DHCR7.md
... ...
@@ -26,7 +26,7 @@ nocite: |
26 26
|DLBCL|GAMBL Genome |0.188 |
27 27
28 28
29
-[[include:mermaid_DHCR7.md]]
29
+[[include:tables/mermaid_DHCR7.md]]
30 30
31 31
## References
32 32
DHDH.md
... ...
@@ -37,6 +37,6 @@ nocite: |
37 37
<!-- ORIGIN: zhangGenomicLandscapeMantle2014 -->
38 38
<!-- MCL: zhangGenomicLandscapeMantle2014 -->
39 39
40
-[[include:mermaid_DHDH.md]]
40
+[[include:tables/mermaid_DHDH.md]]
41 41
42 42
## References
DHX15.md
... ...
@@ -48,6 +48,6 @@ Mutations in this gene were first described in FL in 2021 by Hübschmann et al.[
48 48
[SP193017](https://www.bcgsc.ca/downloads/morinlab/GAMBL/MALY/SP193017.html)
49 49
50 50
51
-[[include:mermaid_DHX15.md]]
51
+[[include:tables/mermaid_DHX15.md]]
52 52
53 53
## References
DHX16.md
... ...
@@ -45,7 +45,7 @@ Mutations in this gene were first described in DLBCL in 2021 by Hübschmann et a
45 45
[SP194212](https://www.bcgsc.ca/downloads/morinlab/GAMBL/MALY/SP194212.html)
46 46
[SP193957](https://www.bcgsc.ca/downloads/morinlab/GAMBL/MALY/SP193957.html)
47 47
48
-[[include:mermaid_DHX16.md]]
48
+[[include:tables/mermaid_DHX16.md]]
49 49
50 50
## References
51 51
DHX33.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_DHX33.md]]
22
+[[include:tables/mermaid_DHX33.md]]
23 23
24 24
## References
25 25
DIAPH2.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_DIAPH2.md]]
22
+[[include:tables/mermaid_DIAPH2.md]]
23 23
24 24
## References
25 25
DIAPH3.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_DIAPH3.md]]
22
+[[include:tables/mermaid_DIAPH3.md]]
23 23
24 24
## References
25 25
DICER1.md
... ...
@@ -42,7 +42,7 @@ Mutations in this gene were reported to be inflated in the original results acco
42 42
<!-- ORIGIN: reddyGeneticFunctionalDrivers2017 -->
43 43
<!-- DLBCL: reddyGeneticFunctionalDrivers2017 -->
44 44
45
-[[include:mermaid_DICER1.md]]
45
+[[include:tables/mermaid_DICER1.md]]
46 46
47 47
## References
48 48
DIP2B.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_DIP2B.md]]
22
+[[include:tables/mermaid_DIP2B.md]]
23 23
24 24
## References
25 25
DLC1.md
... ...
@@ -36,6 +36,6 @@ nocite: |
36 36
<!-- ORIGIN: zhangGenomicLandscapeMantle2014 -->
37 37
<!-- MCL: zhangGenomicLandscapeMantle2014 -->
38 38
39
-[[include:mermaid_DLC1.md]]
39
+[[include:tables/mermaid_DLC1.md]]
40 40
41 41
## References
DLGAP1.md
... ...
@@ -54,6 +54,6 @@ Due to [minimal support](DLGAP1#representative-mutation) in the original primary
54 54
[508](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Love/508_reports.html)
55 55
[668](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Love/668_reports.html)
56 56
57
-[[include:mermaid_DLGAP1.md]]
57
+[[include:tables/mermaid_DLGAP1.md]]
58 58
59 59
## References
DLGAP2.md
... ...
@@ -28,7 +28,7 @@ nocite: |
28 28
|MCL|GAMBL Genome |1.17 |
29 29
30 30
31
-[[include:mermaid_DLGAP2.md]]
31
+[[include:tables/mermaid_DLGAP2.md]]
32 32
33 33
## References
34 34
DMD.md
... ...
@@ -28,7 +28,7 @@ nocite: |
28 28
|MCL|GAMBL Genome |1.754 |
29 29
30 30
31
-[[include:mermaid_DMD.md]]
31
+[[include:tables/mermaid_DMD.md]]
32 32
33 33
## References
34 34
DMXL1.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_DMXL1.md]]
22
+[[include:tables/mermaid_DMXL1.md]]
23 23
24 24
## References
25 25
DNAH12.md
... ...
@@ -27,7 +27,7 @@ nocite: |
27 27
|MCL|GAMBL Genome |1.17 |
28 28
29 29
30
-[[include:mermaid_DNAH12.md]]
30
+[[include:tables/mermaid_DNAH12.md]]
31 31
32 32
## References
33 33
DNAH5.md
... ...
@@ -45,6 +45,6 @@ nocite: |
45 45
[RG036](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Morin_2013/RG036.html)
46 46
[RG130](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Morin_2013/RG130.html)
47 47
48
-[[include:mermaid_DNAH5.md]]
48
+[[include:tables/mermaid_DNAH5.md]]
49 49
50 50
## References
DNAH7.md
... ...
@@ -28,7 +28,7 @@ nocite: |
28 28
|MCL|GAMBL Genome |0.585 |
29 29
30 30
31
-[[include:mermaid_DNAH7.md]]
31
+[[include:tables/mermaid_DNAH7.md]]
32 32
33 33
## References
34 34
DNAI1.md
... ...
@@ -28,7 +28,7 @@ nocite: |
28 28
|MCL|GAMBL Genome |0.585 |
29 29
30 30
31
-[[include:mermaid_DNAI1.md]]
31
+[[include:tables/mermaid_DNAI1.md]]
32 32
33 33
## References
34 34
DNAJC6.md
... ...
@@ -27,7 +27,7 @@ nocite: |
27 27
|FL|GAMBL Exome |0.287 |
28 28
29 29
30
-[[include:mermaid_DNAJC6.md]]
30
+[[include:tables/mermaid_DNAJC6.md]]
31 31
32 32
## References
33 33
DNM2.md
... ...
@@ -51,7 +51,7 @@ Mutations in this gene were first described in DLBCL and FL in 2021 by Hübschma
51 51
[SP124975](https://www.bcgsc.ca/downloads/morinlab/GAMBL/MALY/SP124975.html)
52 52
[SP193130](https://www.bcgsc.ca/downloads/morinlab/GAMBL/MALY/SP193130.html)
53 53
54
-[[include:mermaid_DNM2.md]]
54
+[[include:tables/mermaid_DNM2.md]]
55 55
56 56
## References
57 57
DNMT1.md
... ...
@@ -49,7 +49,7 @@ nocite: |
49 49
**Rating**
50 50
&starf; &star; &star; &star; &star;
51 51
52
-[[include:mermaid_DNMT1.md]]
52
+[[include:tables/mermaid_DNMT1.md]]
53 53
54 54
## References
55 55
DNMT3A.md
... ...
@@ -42,7 +42,7 @@ nocite: |
42 42
<!-- ORIGIN: reddyGeneticFunctionalDrivers2017 -->
43 43
<!-- DLBCL: reddyGeneticFunctionalDrivers2017 -->
44 44
45
-[[include:mermaid_DNMT3A.md]]
45
+[[include:tables/mermaid_DNMT3A.md]]
46 46
47 47
## References
48 48
DNMT3B.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_DNMT3B.md]]
22
+[[include:tables/mermaid_DNMT3B.md]]
23 23
24 24
## References
25 25
DOCK1.md
... ...
@@ -46,7 +46,7 @@ nocite: |
46 46
[DLBCL-RICOVER_773-Tumor](https://bcgsc.ca/downloads/morinlab/GAMBL/Chapuy_2018/DLBCL-RICOVER_773-Tumor.html)
47 47
[DLBCL-RICOVER_977-Tumor](https://bcgsc.ca/downloads/morinlab/GAMBL/Chapuy_2018/DLBCL-RICOVER_977-Tumor.html)
48 48
49
-[[include:mermaid_DOCK1.md]]
49
+[[include:tables/mermaid_DOCK1.md]]
50 50
51 51
## References
52 52
DOCK2.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_DOCK2.md]]
22
+[[include:tables/mermaid_DOCK2.md]]
23 23
24 24
## References
25 25
DOCK5.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_DOCK5.md]]
22
+[[include:tables/mermaid_DOCK5.md]]
23 23
24 24
## References
25 25
DOCK6.md
... ...
@@ -28,7 +28,7 @@ nocite: |
28 28
|MCL|GAMBL Genome |1.754 |
29 29
30 30
31
-[[include:mermaid_DOCK6.md]]
31
+[[include:tables/mermaid_DOCK6.md]]
32 32
33 33
## References
34 34
DOLK.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_DOLK.md]]
22
+[[include:tables/mermaid_DOLK.md]]
23 23
24 24
## References
25 25
DPYD.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_DPYD.md]]
22
+[[include:tables/mermaid_DPYD.md]]
23 23
24 24
## References
25 25
DSC2.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_DSC2.md]]
22
+[[include:tables/mermaid_DSC2.md]]
23 23
24 24
## References
25 25
DSC3.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_DSC3.md]]
22
+[[include:tables/mermaid_DSC3.md]]
23 23
24 24
## References
25 25
DSCAML1.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_DSCAML1.md]]
22
+[[include:tables/mermaid_DSCAML1.md]]
23 23
24 24
## References
25 25
DSEL.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_DSEL.md]]
22
+[[include:tables/mermaid_DSEL.md]]
23 23
24 24
## References
25 25
DSG2.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_DSG2.md]]
22
+[[include:tables/mermaid_DSG2.md]]
23 23
24 24
## References
25 25
DSG4.md
... ...
@@ -43,7 +43,7 @@ nocite: |
43 43
[RG054](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Morin_2013/RG054.html)
44 44
[RG067](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Morin_2013/RG067.html)
45 45
46
-[[include:mermaid_DSG4.md]]
46
+[[include:tables/mermaid_DSG4.md]]
47 47
48 48
## References
49 49
DSP.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_DSP.md]]
22
+[[include:tables/mermaid_DSP.md]]
23 23
24 24
## References
25 25
DTNB.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_DTNB.md]]
22
+[[include:tables/mermaid_DTNB.md]]
23 23
24 24
## References
25 25
DTX1.md
... ...
@@ -111,7 +111,7 @@ Mutations in the DTX1 gene, which encodes the E3 ubiquitin ligase Deltex 1, have
111 111
[323](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Love/323_reports.html)
112 112
[742](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Love/742_reports.html)
113 113
114
-[[include:mermaid_DTX1.md]]
114
+[[include:tables/mermaid_DTX1.md]]
115 115
116 116
## References
117 117
DTX3L.md
... ...
@@ -17,7 +17,7 @@ nocite: |
17 17
18 18
19 19
20
-[[include:mermaid_DTX3L.md]]
20
+[[include:tables/mermaid_DTX3L.md]]
21 21
22 22
## References
23 23
DUOXA2.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_DUOXA2.md]]
22
+[[include:tables/mermaid_DUOXA2.md]]
23 23
24 24
## References
25 25
DUPD1.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_DUPD1.md]]
22
+[[include:tables/mermaid_DUPD1.md]]
23 23
24 24
## References
25 25
DUSP2.md
... ...
@@ -64,7 +64,7 @@ The mutation pattern in DLBCL implies the preferential accumulation of *inactiva
64 64
<!-- PMBL: dunsCharacterizationDLBCLPMBL2021b -->
65 65
<!-- DLBCL: morinMutationalStructuralAnalysis2013 -->
66 66
67
-[[include:mermaid_DUSP2.md]]
67
+[[include:tables/mermaid_DUSP2.md]]
68 68
69 69
## References
70 70
DUSP27.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_DUSP27.md]]
22
+[[include:tables/mermaid_DUSP27.md]]
23 23
24 24
## References
25 25
DUSP9.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_DUSP9.md]]
22
+[[include:tables/mermaid_DUSP9.md]]
23 23
24 24
## References
25 25
DYNC1H1.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_DYNC1H1.md]]
22
+[[include:tables/mermaid_DYNC1H1.md]]
23 23
24 24
## References
25 25
DYNC1I1.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_DYNC1I1.md]]
22
+[[include:tables/mermaid_DYNC1I1.md]]
23 23
24 24
## References
25 25
E2F2.md
... ...
@@ -35,7 +35,7 @@ nocite: |
35 35
<!-- ORIGIN: burkhardtClinicalRelevanceMolecular2022b -->
36 36
<!-- BL: burkhardtClinicalRelevanceMolecular2022b -->
37 37
38
-[[include:mermaid_E2F2.md]]
38
+[[include:tables/mermaid_E2F2.md]]
39 39
40 40
## References
41 41
EBF1.md
... ...
@@ -66,7 +66,7 @@ Driver mutations affecting this gene in DLBCL/FL have been experimentally demons
66 66
<!-- PMBL: reichelFlowSortingExome2015a -->
67 67
<!-- DLBCL: bohleRoleEarlyBcell2013 -->
68 68
69
-[[include:mermaid_EBF1.md]]
69
+[[include:tables/mermaid_EBF1.md]]
70 70
71 71
## References
72 72
ECGF1.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_ECGF1.md]]
22
+[[include:tables/mermaid_ECGF1.md]]
23 23
24 24
## References
25 25
ECT2L.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_ECT2L.md]]
22
+[[include:tables/mermaid_ECT2L.md]]
23 23
24 24
## References
25 25
EDNRB.md
... ...
@@ -35,7 +35,7 @@ nocite: |
35 35
<!-- ORIGIN: burkhardtClinicalRelevanceMolecular2022b -->
36 36
<!-- BL: burkhardtClinicalRelevanceMolecular2022b -->
37 37
38
-[[include:mermaid_EDNRB.md]]
38
+[[include:tables/mermaid_EDNRB.md]]
39 39
40 40
## References
41 41
EEF1A1.md
... ...
@@ -52,6 +52,6 @@ This gene has some recurrent sites of mutations (hot spots). The mutation patter
52 52
<!-- DLBCL: hubschmannMutationalMechanismsShaping2021b -->
53 53
<!-- FL: hubschmannMutationalMechanismsShaping2021b -->
54 54
<!-- PMBL: reichelFlowSortingExome2015a -->
55
-[[include:mermaid_EEF1A1.md]]
55
+[[include:tables/mermaid_EEF1A1.md]]
56 56
57 57
## References
EGFR.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_EGFR.md]]
22
+[[include:tables/mermaid_EGFR.md]]
23 23
24 24
## References
25 25
EGR1.md
... ...
@@ -27,7 +27,7 @@ nocite: |
27 27
|FL|GAMBL Exome |3.152 |
28 28
29 29
30
-[[include:mermaid_EGR1.md]]
30
+[[include:tables/mermaid_EGR1.md]]
31 31
32 32
## References
33 33
EGR2.md
... ...
@@ -27,7 +27,7 @@ nocite: |
27 27
|FL|GAMBL Exome |1.146 |
28 28
29 29
30
-[[include:mermaid_EGR2.md]]
30
+[[include:tables/mermaid_EGR2.md]]
31 31
32 32
## References
33 33
EIF2AK4.md
... ...
@@ -35,6 +35,6 @@ nocite: |
35 35
<!-- ORIGIN: zhangGenomicLandscapeMantle2014 -->
36 36
<!-- MCL: zhangGenomicLandscapeMantle2014 -->
37 37
38
-[[include:mermaid_EIF2AK4.md]]
38
+[[include:tables/mermaid_EIF2AK4.md]]
39 39
40 40
## References
EIF2C4.md
... ...
@@ -32,3 +32,6 @@ nocite: |
32 32
33 33
[[include:browser_EIF2C4.md]]
34 34
35
+[[include:tables/mermaid_EIF2C4.md]]
36
+
37
+## References
EIF4A1.md
... ...
@@ -33,6 +33,6 @@ nocite: |
33 33
<!-- ORIGIN: paneaWholeGenomeLandscape2019 -->
34 34
<!-- BL: paneaWholeGenomeLandscape2019 -->
35 35
36
-[[include:mermaid_EIF4A1.md]]
36
+[[include:tables/mermaid_EIF4A1.md]]
37 37
38 38
## References
ELP2.md
... ...
@@ -27,7 +27,7 @@ nocite: |
27 27
|MCL|GAMBL Genome |0.585 |
28 28
29 29
30
-[[include:mermaid_ELP2.md]]
30
+[[include:tables/mermaid_ELP2.md]]
31 31
32 32
## References
33 33
EML2.md
... ...
@@ -54,6 +54,6 @@ Due to [minimal support](EML2#representative-mutation) in the original primary d
54 54
[1060](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Love/1060_reports.html)
55 55
[1096](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Love/1096_reports.html)
56 56
57
-[[include:mermaid_EML2.md]]
57
+[[include:tables/mermaid_EML2.md]]
58 58
59 59
## References
ENTPD3.md
... ...
@@ -51,7 +51,7 @@ nocite: |
51 51
52 52
[745](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Love/745_reports.html)
53 53
54
-[[include:mermaid_ENTPD3.md]]
54
+[[include:tables/mermaid_ENTPD3.md]]
55 55
56 56
## References
57 57
EP300.md
... ...
@@ -68,7 +68,7 @@ Studies using genome-wide CRISPR-Cas9 screens have identified synthetic lethal i
68 68
## Expression
69 69
![](images/gene_expression/EP300_by_pathology.svg)
70 70
71
-[[include:mermaid_EP300.md]]
71
+[[include:tables/mermaid_EP300.md]]
72 72
73 73
## References
74 74
EPHA3.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_EPHA3.md]]
22
+[[include:tables/mermaid_EPHA3.md]]
23 23
24 24
## References
25 25
EPHA5.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_EPHA5.md]]
22
+[[include:tables/mermaid_EPHA5.md]]
23 23
24 24
## References
25 25
EPHA7.md
... ...
@@ -28,7 +28,7 @@ nocite: |
28 28
|MCL|GAMBL Genome |1.754 |
29 29
30 30
31
-[[include:mermaid_EPHA7.md]]
31
+[[include:tables/mermaid_EPHA7.md]]
32 32
33 33
## References
34 34
EPHB2.md
... ...
@@ -57,6 +57,6 @@ nocite: |
57 57
[516](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Love/516_reports.html)
58 58
[676](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Love/676_reports.html)
59 59
60
-[[include:mermaid_EPHB2.md]]
60
+[[include:tables/mermaid_EPHB2.md]]
61 61
62 62
## References
EPPK1.md
... ...
@@ -39,6 +39,6 @@ nocite: |
39 39
<!-- ORIGIN: paneaWholeGenomeLandscape2019 -->
40 40
<!-- BL: paneaWholeGenomeLandscape2019 -->
41 41
42
-[[include:mermaid_EPPK1.md]]
42
+[[include:tables/mermaid_EPPK1.md]]
43 43
44 44
## References
ERAP1.md
... ...
@@ -35,7 +35,7 @@ nocite: |
35 35
<!-- ORIGIN: burkhardtClinicalRelevanceMolecular2022b -->
36 36
<!-- BL: burkhardtClinicalRelevanceMolecular2022b -->
37 37
38
-[[include:mermaid_ERAP1.md]]
38
+[[include:tables/mermaid_ERAP1.md]]
39 39
40 40
## References
41 41
ERAP2.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_ERAP2.md]]
22
+[[include:tables/mermaid_ERAP2.md]]
23 23
24 24
## References
25 25
ERBB3.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_ERBB3.md]]
22
+[[include:tables/mermaid_ERBB3.md]]
23 23
24 24
## References
25 25
ERN2.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_ERN2.md]]
22
+[[include:tables/mermaid_ERN2.md]]
23 23
24 24
## References
25 25
ESX1.md
... ...
@@ -37,7 +37,7 @@ nocite: |
37 37
<!-- ORIGIN: zhangGenomicLandscapeMantle2014 -->
38 38
<!-- MCL: zhangGenomicLandscapeMantle2014 -->
39 39
40
-[[include:mermaid_ESX1.md]]
40
+[[include:tables/mermaid_ESX1.md]]
41 41
42 42
## References
43 43
ETNPPL.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_ETNPPL.md]]
22
+[[include:tables/mermaid_ETNPPL.md]]
23 23
24 24
## References
25 25
ETS1.md
... ...
@@ -85,7 +85,7 @@ The mutation pattern in DLBCL implies the preferential accumulation of *inactiva
85 85
&starf; &star; &star; &star; &star;
86 86
87 87
88
-[[include:mermaid_ETS1.md]]
88
+[[include:tables/mermaid_ETS1.md]]
89 89
90 90
## References
91 91
ETV6.md
... ...
@@ -56,7 +56,7 @@ Driver mutations affecting this gene in DLBCL have been experimentally demonstra
56 56
<!-- ORIGIN: arthurGenomewideDiscoverySomatic2018 -->
57 57
<!-- DLBCL: arthurGenomewideDiscoverySomatic2018 -->
58 58
59
-[[include:mermaid_ETV6.md]]
59
+[[include:tables/mermaid_ETV6.md]]
60 60
61 61
## References
62 62
EWSR1.md
... ...
@@ -36,6 +36,6 @@ nocite: |
36 36
<!-- ORIGIN: pararajalingamCodingNoncodingDrivers2020 -->
37 37
<!-- MCL: pararajalingamCodingNoncodingDrivers2020 -->
38 38
39
-[[include:mermaid_EWSR1.md]]
39
+[[include:tables/mermaid_EWSR1.md]]
40 40
41 41
## References
EXOSC6.md
... ...
@@ -34,7 +34,7 @@ nocite: |
34 34
<!-- ORIGIN: schmitzBurkittLymphomaPathogenesis2012 -->
35 35
<!-- BL: schmitzBurkittLymphomaPathogenesis2012 -->
36 36
37
-[[include:mermaid_EXOSC6.md]]
37
+[[include:tables/mermaid_EXOSC6.md]]
38 38
39 39
## References
40 40
EXTL3.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_EXTL3.md]]
22
+[[include:tables/mermaid_EXTL3.md]]
23 23
24 24
## References
25 25
EZH1.md
... ...
@@ -28,7 +28,7 @@ nocite: |
28 28
|MCL|GAMBL Genome |1.17 |
29 29
30 30
31
-[[include:mermaid_EZH1.md]]
31
+[[include:tables/mermaid_EZH1.md]]
32 32
33 33
## References
34 34
EZR.md
... ...
@@ -44,6 +44,6 @@ nocite: |
44 44
<!-- ORIGIN: deschGenotypingCirculatingTumor2020 -->
45 45
<!-- PMBL: deschGenotypingCirculatingTumor2020 -->
46 46
47
-[[include:mermaid_EZR.md]]
47
+[[include:tables/mermaid_EZR.md]]
48 48
49 49
## References
FAIM.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_FAIM.md]]
22
+[[include:tables/mermaid_FAIM.md]]
23 23
24 24
## References
25 25
FAM161A.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_FAM161A.md]]
22
+[[include:tables/mermaid_FAM161A.md]]
23 23
24 24
## References
25 25
FAM38B.md
... ...
@@ -38,7 +38,7 @@ nocite: |
38 38
[RG081](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Morin_2013/RG081.html)
39 39
[RG130](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Morin_2013/RG130.html)
40 40
41
-[[include:mermaid_FAM38B.md]]
41
+[[include:tables/mermaid_FAM38B.md]]
42 42
43 43
## References
44 44
FAM62C.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_FAM62C.md]]
22
+[[include:tables/mermaid_FAM62C.md]]
23 23
24 24
## References
25 25
FANCD2.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_FANCD2.md]]
22
+[[include:tables/mermaid_FANCD2.md]]
23 23
24 24
## References
25 25
FAS.md
... ...
@@ -40,7 +40,7 @@ Driver mutations affecting this gene in FL/DLBCL have been experimentally demons
40 40
## Expression
41 41
![](images/gene_expression/FAS_by_pathology.svg)
42 42
43
-[[include:mermaid_FAS.md]]
43
+[[include:tables/mermaid_FAS.md]]
44 44
45 45
## References
46 46
FAT1.md
... ...
@@ -28,7 +28,7 @@ nocite: |
28 28
|MCL|GAMBL Genome |2.339 |
29 29
30 30
31
-[[include:mermaid_FAT1.md]]
31
+[[include:tables/mermaid_FAT1.md]]
32 32
33 33
## References
34 34
FAT2.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_FAT2.md]]
22
+[[include:tables/mermaid_FAT2.md]]
23 23
24 24
## References
25 25
FAT4.md
... ...
@@ -50,6 +50,6 @@ nocite: |
50 50
[RG081](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Morin_2013/RG081.html)
51 51
[RG111](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Morin_2013/RG111.html)
52 52
53
-[[include:mermaid_FAT4.md]]
53
+[[include:tables/mermaid_FAT4.md]]
54 54
55 55
## References
FBLN2.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_FBLN2.md]]
22
+[[include:tables/mermaid_FBLN2.md]]
23 23
24 24
## References
25 25
FBXO11.md
... ...
@@ -58,7 +58,7 @@ Driver mutations affecting this gene in DLBCL/BL have been experimentally demons
58 58
## Expression
59 59
![](images/gene_expression/FBXO11_by_pathology.svg)
60 60
61
-[[include:mermaid_FBXO11.md]]
61
+[[include:tables/mermaid_FBXO11.md]]
62 62
63 63
## References
64 64
<!-- ORIGIN: parryWholeExomeSequencing2013 -->
FBXO31.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_FBXO31.md]]
22
+[[include:tables/mermaid_FBXO31.md]]
23 23
24 24
## References
25 25
FBXW7.md
... ...
@@ -38,7 +38,7 @@ Driver mutations affecting this gene in DLBCL have been experimentally demonstra
38 38
## Expression
39 39
![](images/gene_expression/FBXW7_by_pathology.svg)
40 40
41
-[[include:mermaid_FBXW7.md]]
41
+[[include:tables/mermaid_FBXW7.md]]
42 42
43 43
## References
44 44
FGD3.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_FGD3.md]]
22
+[[include:tables/mermaid_FGD3.md]]
23 23
24 24
## References
25 25
FGFR1.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_FGFR1.md]]
22
+[[include:tables/mermaid_FGFR1.md]]
23 23
24 24
## References
25 25
FGFR3.md
... ...
@@ -56,7 +56,7 @@ Due to [minimal support](FGFR3#representative-mutation) in the original primary
56 56
[479](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Love/479_reports.html)
57 57
[515](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Love/515_reports.html)
58 58
59
-[[include:mermaid_FGFR3.md]]
59
+[[include:tables/mermaid_FGFR3.md]]
60 60
61 61
## References
62 62
FGFRL1.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_FGFRL1.md]]
22
+[[include:tables/mermaid_FGFRL1.md]]
23 23
24 24
## References
25 25
FIGN.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_FIGN.md]]
22
+[[include:tables/mermaid_FIGN.md]]
23 23
24 24
## References
25 25
FLNA.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_FLNA.md]]
22
+[[include:tables/mermaid_FLNA.md]]
23 23
24 24
## References
25 25
FLNC.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_FLNC.md]]
22
+[[include:tables/mermaid_FLNC.md]]
23 23
24 24
## References
25 25
FLT1.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_FLT1.md]]
22
+[[include:tables/mermaid_FLT1.md]]
23 23
24 24
## References
25 25
FLYWCH1.md
... ...
@@ -34,7 +34,7 @@ nocite: |
34 34
<!-- ORIGIN: schmitzBurkittLymphomaPathogenesis2012 -->
35 35
<!-- BL: schmitzBurkittLymphomaPathogenesis2012 -->
36 36
37
-[[include:mermaid_FLYWCH1.md]]
37
+[[include:tables/mermaid_FLYWCH1.md]]
38 38
39 39
## References
40 40
FMO2.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_FMO2.md]]
22
+[[include:tables/mermaid_FMO2.md]]
23 23
24 24
## References
25 25
FN1.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_FN1.md]]
22
+[[include:tables/mermaid_FN1.md]]
23 23
24 24
## References
25 25
FNDC1.md
... ...
@@ -40,7 +40,7 @@ nocite: |
40 40
[RG049](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Morin_2013/RG049.html)
41 41
[RG081](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Morin_2013/RG081.html)
42 42
43
-[[include:mermaid_FNDC1.md]]
43
+[[include:tables/mermaid_FNDC1.md]]
44 44
45 45
## References
46 46
FOXC1.md
... ...
@@ -34,7 +34,7 @@ FOXC1 is a transcription factor that regulates genes involved in cell growth, di
34 34
## Expression
35 35
![](images/gene_expression/FOXC1_by_pathology.svg)
36 36
37
-[[include:mermaid_FOXC1.md]]
37
+[[include:tables/mermaid_FOXC1.md]]
38 38
39 39
## References
40 40
FOXO1.md
... ...
@@ -65,7 +65,7 @@ Driver mutations affecting this gene in FL/DLBCL/BL have been experimentally dem
65 65
## Expression
66 66
![](images/gene_expression/FOXO1_by_pathology.svg)
67 67
68
-[[include:mermaid_FOXO1.md]]
68
+[[include:tables/mermaid_FOXO1.md]]
69 69
70 70
## References
71 71
FOXP1.md
... ...
@@ -43,7 +43,7 @@ nocite: |
43 43
## Expression
44 44
![](images/gene_expression/FOXP1_by_pathology.svg)
45 45
46
-[[include:mermaid_FOXP1.md]]
46
+[[include:tables/mermaid_FOXP1.md]]
47 47
48 48
## References
49 49
FRMPD1.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_FRMPD1.md]]
22
+[[include:tables/mermaid_FRMPD1.md]]
23 23
24 24
## References
25 25
FTCD.md
... ...
@@ -59,7 +59,7 @@ Due to [minimal support](FTCD#representative-mutation) in the original primary d
59 59
[512](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Love/512_reports.html)
60 60
[672](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Love/672_reports.html)
61 61
62
-[[include:mermaid_FTCD.md]]
62
+[[include:tables/mermaid_FTCD.md]]
63 63
64 64
## References
65 65
FUBP1.md
... ...
@@ -41,6 +41,6 @@ nocite: |
41 41
<!-- ORIGIN: reddyGeneticFunctionalDrivers2017 -->
42 42
<!-- DLBCL: reddyGeneticFunctionalDrivers2017 -->
43 43
44
-[[include:mermaid_FUBP1.md]]
44
+[[include:tables/mermaid_FUBP1.md]]
45 45
46 46
## References
FUT5.md
... ...
@@ -39,7 +39,7 @@ nocite: |
39 39
40 40
[DLBCL-RICOVER_173-Tumor](https://bcgsc.ca/downloads/morinlab/GAMBL/Chapuy_2018/DLBCL-RICOVER_173-Tumor.html)
41 41
42
-[[include:mermaid_FUT5.md]]
42
+[[include:tables/mermaid_FUT5.md]]
43 43
44 44
## References
45 45
FZD1.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_FZD1.md]]
22
+[[include:tables/mermaid_FZD1.md]]
23 23
24 24
## References
25 25
FZD3.md
... ...
@@ -55,7 +55,7 @@ nocite: |
55 55
&starf; &star; &star; &star; &star;
56 56
57 57
58
-[[include:mermaid_FZD3.md]]
58
+[[include:tables/mermaid_FZD3.md]]
59 59
60 60
## References
61 61
FZR1.md
... ...
@@ -36,7 +36,7 @@ Mutations in this gene were first described in DLBCL and FL in 2021 by Hübschma
36 36
[SP194077](https://www.bcgsc.ca/downloads/morinlab/GAMBL/MALY/SP194077.html)
37 37
[SP193650](https://www.bcgsc.ca/downloads/morinlab/GAMBL/MALY/SP193650.html)
38 38
39
-[[include:mermaid_FZR1.md]]
39
+[[include:tables/mermaid_FZR1.md]]
40 40
41 41
## References
42 42
GABRA1.md
... ...
@@ -28,7 +28,7 @@ nocite: |
28 28
|MCL|GAMBL Genome |0.585 |
29 29
30 30
31
-[[include:mermaid_GABRA1.md]]
31
+[[include:tables/mermaid_GABRA1.md]]
32 32
33 33
## References
34 34
GABRA2.md
... ...
@@ -35,7 +35,7 @@ nocite: |
35 35
<!-- ORIGIN: chapuyMolecularSubtypesDiffuse2018b -->
36 36
<!-- DLBCL: chapuyMolecularSubtypesDiffuse2018b -->
37 37
38
-[[include:mermaid_GABRA2.md]]
38
+[[include:tables/mermaid_GABRA2.md]]
39 39
40 40
## References
41 41
GABRG1.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_GABRG1.md]]
22
+[[include:tables/mermaid_GABRG1.md]]
23 23
24 24
## References
25 25
GAK.md
... ...
@@ -40,7 +40,7 @@ Mutations in this gene were first described in DLBCL in 2021 by Hübschmann et a
40 40
[SP192765](https://www.bcgsc.ca/downloads/morinlab/GAMBL/MALY/SP192765.html)
41 41
[SP192870](https://www.bcgsc.ca/downloads/morinlab/GAMBL/MALY/SP192870.html)
42 42
43
-[[include:mermaid_GAK.md]]
43
+[[include:tables/mermaid_GAK.md]]
44 44
45 45
## References
46 46
GATA2.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_GATA2.md]]
22
+[[include:tables/mermaid_GATA2.md]]
23 23
24 24
## References
25 25
GATA3.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_GATA3.md]]
22
+[[include:tables/mermaid_GATA3.md]]
23 23
24 24
## References
25 25
GBP7.md
... ...
@@ -32,7 +32,7 @@ nocite: |
32 32
<!-- ORIGIN: russler-germainMutationsAssociatedProgression2023a -->
33 33
<!-- FL: russler-germainMutationsAssociatedProgression2023b -->
34 34
35
-[[include:mermaid_GBP7.md]]
35
+[[include:tables/mermaid_GBP7.md]]
36 36
37 37
## References
38 38
GCN1L1.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_GCN1L1.md]]
22
+[[include:tables/mermaid_GCN1L1.md]]
23 23
24 24
## References
25 25
GCSAM.md
... ...
@@ -26,7 +26,7 @@ nocite: |
26 26
|FL|GAMBL Exome |0.287 |
27 27
28 28
29
-[[include:mermaid_GCSAM.md]]
29
+[[include:tables/mermaid_GCSAM.md]]
30 30
31 31
## References
32 32
GJA8.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_GJA8.md]]
22
+[[include:tables/mermaid_GJA8.md]]
23 23
24 24
## References
25 25
GJB4.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_GJB4.md]]
22
+[[include:tables/mermaid_GJB4.md]]
23 23
24 24
## References
25 25
GNA13.md
... ...
@@ -57,6 +57,6 @@ Driver mutations affecting this gene in BL/FL/DLBCL have been experimentally dem
57 57
<!-- BL: loveGeneticLandscapeMutations2012 -->
58 58
<!-- DLBCL: morinFrequentMutationHistonemodifying2011 -->
59 59
60
-[[include:mermaid_GNA13.md]]
60
+[[include:tables/mermaid_GNA13.md]]
61 61
62 62
## References
GNAI2.md
... ...
@@ -57,7 +57,7 @@ Driver mutations affecting this gene in DLBCL have been experimentally demonstra
57 57
## Expression
58 58
![](images/gene_expression/GNAI2_by_pathology.svg)
59 59
60
-[[include:mermaid_GNAI2.md]]
60
+[[include:tables/mermaid_GNAI2.md]]
61 61
62 62
## References
63 63
GNAS.md
... ...
@@ -88,7 +88,7 @@ nocite: |
88 88
[Reddy_3977T](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Reddy/igv_reports/Reddy_3977T.html)
89 89
[Reddy_816T](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Reddy/igv_reports/Reddy_816T.html)
90 90
91
-[[include:mermaid_GNAS.md]]
91
+[[include:tables/mermaid_GNAS.md]]
92 92
93 93
## References
94 94
GOLGA5.md
... ...
@@ -35,6 +35,6 @@ nocite: |
35 35
<!-- ORIGIN: reddyGeneticFunctionalDrivers2017 -->
36 36
<!-- DLBCL: reddyGeneticFunctionalDrivers2017 -->
37 37
38
-[[include:mermaid_GOLGA5.md]]
38
+[[include:tables/mermaid_GOLGA5.md]]
39 39
40 40
## References
GOPC.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_GOPC.md]]
22
+[[include:tables/mermaid_GOPC.md]]
23 23
24 24
## References
25 25
GPC5.md
... ...
@@ -35,7 +35,7 @@ nocite: |
35 35
<!-- ORIGIN: schmitzGeneticsPathogenesisDiffuse2018a -->
36 36
<!-- DLBCL: schmitzGeneticsPathogenesisDiffuse2018a -->
37 37
38
-[[include:mermaid_GPC5.md]]
38
+[[include:tables/mermaid_GPC5.md]]
39 39
40 40
## References
41 41
GPD2.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_GPD2.md]]
22
+[[include:tables/mermaid_GPD2.md]]
23 23
24 24
## References
25 25
GPR126.md
... ...
@@ -27,7 +27,7 @@ nocite: |
27 27
|MCL|GAMBL Genome |0.585 |
28 28
29 29
30
-[[include:mermaid_GPR126.md]]
30
+[[include:tables/mermaid_GPR126.md]]
31 31
32 32
## References
33 33
GPR133.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_GPR133.md]]
22
+[[include:tables/mermaid_GPR133.md]]
23 23
24 24
## References
25 25
GPR15.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_GPR15.md]]
22
+[[include:tables/mermaid_GPR15.md]]
23 23
24 24
## References
25 25
GPR98.md
... ...
@@ -28,7 +28,7 @@ nocite: |
28 28
|MCL|GAMBL Genome |1.754 |
29 29
30 30
31
-[[include:mermaid_GPR98.md]]
31
+[[include:tables/mermaid_GPR98.md]]
32 32
33 33
## References
34 34
GPS2.md
... ...
@@ -27,7 +27,7 @@ nocite: |
27 27
|FL|GAMBL Exome |0.573 |
28 28
29 29
30
-[[include:mermaid_GPS2.md]]
30
+[[include:tables/mermaid_GPS2.md]]
31 31
32 32
## References
33 33
GRB2.md
... ...
@@ -35,6 +35,6 @@ Further research is needed to elucidate its specific role in DLBCL.
35 35
<!-- DLBCL: pasqualucciAnalysisCodingGenome2011 -->
36 36
<!-- BL: paneaWholeGenomeLandscape2019 -->
37 37
38
-[[include:mermaid_GRB2.md]]
38
+[[include:tables/mermaid_GRB2.md]]
39 39
40 40
## References
GREM2.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_GREM2.md]]
22
+[[include:tables/mermaid_GREM2.md]]
23 23
24 24
## References
25 25
GRHPR.md
... ...
@@ -37,7 +37,7 @@ GRHPR is one of [a number of genes](https://github.com/morinlab/LLMPP/wiki/ashm)
37 37
## Expression
38 38
![](images/gene_expression/GRHPR_by_pathology.svg)
39 39
40
-[[include:mermaid_GRHPR.md]]
40
+[[include:tables/mermaid_GRHPR.md]]
41 41
42 42
## References
43 43
GRIA2.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_GRIA2.md]]
22
+[[include:tables/mermaid_GRIA2.md]]
23 23
24 24
## References
25 25
GRIK5.md
... ...
@@ -50,6 +50,6 @@ nocite: |
50 50
[1061](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Love/1061_reports.html)
51 51
[475](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Love/475_reports.html)
52 52
53
-[[include:mermaid_GRIK5.md]]
53
+[[include:tables/mermaid_GRIK5.md]]
54 54
55 55
## References
GRIN2A.md
... ...
@@ -36,7 +36,7 @@ nocite: |
36 36
<!-- ORIGIN: zhangGenomicLandscapeMantle2014 -->
37 37
<!-- MCL: zhangGenomicLandscapeMantle2014 -->
38 38
39
-[[include:mermaid_GRIN2A.md]]
39
+[[include:tables/mermaid_GRIN2A.md]]
40 40
41 41
## References
42 42
GRM5.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_GRM5.md]]
22
+[[include:tables/mermaid_GRM5.md]]
23 23
24 24
## References
25 25
GRM6.md
... ...
@@ -32,7 +32,7 @@ nocite: |
32 32
<!-- ORIGIN: russler-germainMutationsAssociatedProgression2023a -->
33 33
<!-- FL: russler-germainMutationsAssociatedProgression2023b -->
34 34
35
-[[include:mermaid_GRM6.md]]
35
+[[include:tables/mermaid_GRM6.md]]
36 36
37 37
## References
38 38
GSG2.md
... ...
@@ -39,7 +39,7 @@ nocite: |
39 39
<!-- ORIGIN: schmitzGeneticsPathogenesisDiffuse2018a -->
40 40
<!-- DLBCL: schmitzGeneticsPathogenesisDiffuse2018a -->
41 41
42
-[[include:mermaid_GSG2.md]]
42
+[[include:tables/mermaid_GSG2.md]]
43 43
44 44
## References
45 45
GTSE1.md
... ...
@@ -34,7 +34,7 @@ nocite: |
34 34
<!-- ORIGIN: schmitzBurkittLymphomaPathogenesis2012 -->
35 35
<!-- BL: schmitzBurkittLymphomaPathogenesis2012 -->
36 36
37
-[[include:mermaid_GTSE1.md]]
37
+[[include:tables/mermaid_GTSE1.md]]
38 38
39 39
## References
40 40
H1-4.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_H1-4.md]]
22
+[[include:tables/mermaid_H1-4.md]]
23 23
24 24
## References
25 25
H1-5.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_H1-5.md]]
22
+[[include:tables/mermaid_H1-5.md]]
23 23
24 24
## References
25 25
H1FOO.md
... ...
@@ -25,7 +25,7 @@ nocite: |
25 25
|DLBCL|GAMBL Exome |0.701 |
26 26
27 27
28
-[[include:mermaid_H1FOO.md]]
28
+[[include:tables/mermaid_H1FOO.md]]
29 29
30 30
## References
31 31
H6PD.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_H6PD.md]]
22
+[[include:tables/mermaid_H6PD.md]]
23 23
24 24
## References
25 25
HACE1.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_HACE1.md]]
22
+[[include:tables/mermaid_HACE1.md]]
23 23
24 24
## References
25 25
HCK.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_HCK.md]]
22
+[[include:tables/mermaid_HCK.md]]
23 23
24 24
## References
25 25
HDAC7.md
... ...
@@ -39,7 +39,7 @@ nocite: |
39 39
40 40
[RG003](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Morin_2013/RG003.html)
41 41
42
-[[include:mermaid_HDAC7.md]]
42
+[[include:tables/mermaid_HDAC7.md]]
43 43
44 44
## References
45 45
HECW2.md
... ...
@@ -28,7 +28,7 @@ nocite: |
28 28
|MCL|GAMBL Genome |0.585 |
29 29
30 30
31
-[[include:mermaid_HECW2.md]]
31
+[[include:tables/mermaid_HECW2.md]]
32 32
33 33
## References
34 34
HELLS.md
... ...
@@ -26,7 +26,7 @@ nocite: |
26 26
|DLBCL|GAMBL Genome |0.564 |
27 27
28 28
29
-[[include:mermaid_HELLS.md]]
29
+[[include:tables/mermaid_HELLS.md]]
30 30
31 31
## References
32 32
HEPH.md
... ...
@@ -32,6 +32,6 @@ nocite: |
32 32
<!-- ORIGIN: zhangGenomicLandscapeMantle2014 -->
33 33
<!-- MCL: zhangGenomicLandscapeMantle2014 -->
34 34
35
-[[include:mermaid_HEPH.md]]
35
+[[include:tables/mermaid_HEPH.md]]
36 36
37 37
## References
HERC2.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_HERC2.md]]
22
+[[include:tables/mermaid_HERC2.md]]
23 23
24 24
## References
25 25
HFE.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_HFE.md]]
22
+[[include:tables/mermaid_HFE.md]]
23 23
24 24
## References
25 25
HIPK3.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_HIPK3.md]]
22
+[[include:tables/mermaid_HIPK3.md]]
23 23
24 24
## References
25 25
HIST1H1B.md
... ...
@@ -39,6 +39,6 @@ This is one of several genes that encode linker histone proteins that are recurr
39 39
<!-- FL: krysiakRecurrentSomaticMutations2017b -->
40 40
<!-- DLBCL: chapuyMolecularSubtypesDiffuse2018b -->
41 41
42
-[[include:mermaid_HIST1H1B.md]]
42
+[[include:tables/mermaid_HIST1H1B.md]]
43 43
44 44
## References
HIST1H1E.md
... ...
@@ -59,7 +59,7 @@ Mutations in this gene were first described in DLBCL in 2013 by Morin et al.[@mo
59 59
60 60
[[include:browser_HIST1H1E.md]]
61 61
62
-[[include:mermaid_HIST1H1E.md]]
62
+[[include:tables/mermaid_HIST1H1E.md]]
63 63
64 64
## References
65 65
HIST1H2AC.md
... ...
@@ -64,6 +64,6 @@ This gene encodes the H2A protein, one of the core proteins comprising nucleosom
64 64
<!-- FL: krysiakRecurrentSomaticMutations2017b -->
65 65
<!-- DLBCL: morinMutationalStructuralAnalysis2013 -->
66 66
67
-[[include:mermaid_HIST1H2AC.md]]
67
+[[include:tables/mermaid_HIST1H2AC.md]]
68 68
69 69
## References
HIST1H2AD.md
... ...
@@ -27,7 +27,7 @@ nocite: |
27 27
|FL|GAMBL Exome |0.573 |
28 28
29 29
30
-[[include:mermaid_HIST1H2AD.md]]
30
+[[include:tables/mermaid_HIST1H2AD.md]]
31 31
32 32
## References
33 33
HIST1H2AL.md
... ...
@@ -26,7 +26,7 @@ nocite: |
26 26
|FL|GAMBL Exome |0.573 |
27 27
28 28
29
-[[include:mermaid_HIST1H2AL.md]]
29
+[[include:tables/mermaid_HIST1H2AL.md]]
30 30
31 31
## References
32 32
HIST1H2BC.md
... ...
@@ -69,6 +69,6 @@ This gene encodes the H2A protein, one of the core proteins comprising nucleosom
69 69
<!-- FL: krysiakRecurrentSomaticMutations2017b -->
70 70
<!-- DLBCL: reddyGeneticFunctionalDrivers2017 -->
71 71
72
-[[include:mermaid_HIST1H2BC.md]]
72
+[[include:tables/mermaid_HIST1H2BC.md]]
73 73
74 74
## References
HIST1H2BD.md
... ...
@@ -35,6 +35,6 @@ nocite: |
35 35
<!-- ORIGIN: krysiakRecurrentSomaticMutations2017b -->
36 36
<!-- FL: krysiakRecurrentSomaticMutations2017b -->
37 37
38
-[[include:mermaid_HIST1H2BD.md]]
38
+[[include:tables/mermaid_HIST1H2BD.md]]
39 39
40 40
## References
HIST1H2BG.md
... ...
@@ -35,6 +35,6 @@ nocite: |
35 35
<!-- ORIGIN: krysiakRecurrentSomaticMutations2017b -->
36 36
<!-- FL: krysiakRecurrentSomaticMutations2017b -->
37 37
38
-[[include:mermaid_HIST1H2BG.md]]
38
+[[include:tables/mermaid_HIST1H2BG.md]]
39 39
40 40
## References
HIST1H2BM.md
... ...
@@ -36,6 +36,6 @@ nocite: |
36 36
<!-- ORIGIN: krysiakRecurrentSomaticMutations2017b -->
37 37
<!-- FL: krysiakRecurrentSomaticMutations2017b -->
38 38
39
-[[include:mermaid_HIST1H2BM.md]]
39
+[[include:tables/mermaid_HIST1H2BM.md]]
40 40
41 41
## References
HIST1H2BO.md
... ...
@@ -27,7 +27,7 @@ nocite: |
27 27
|FL|GAMBL Exome |0.573 |
28 28
29 29
30
-[[include:mermaid_HIST1H2BO.md]]
30
+[[include:tables/mermaid_HIST1H2BO.md]]
31 31
32 32
## References
33 33
HIST1H3A.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_HIST1H3A.md]]
22
+[[include:tables/mermaid_HIST1H3A.md]]
23 23
24 24
## References
25 25
HIST1H3G.md
... ...
@@ -35,6 +35,6 @@ nocite: |
35 35
<!-- ORIGIN: krysiakRecurrentSomaticMutations2017b -->
36 36
<!-- FL: krysiakRecurrentSomaticMutations2017b -->
37 37
38
-[[include:mermaid_HIST1H3G.md]]
38
+[[include:tables/mermaid_HIST1H3G.md]]
39 39
40 40
## References
HIST1H4E.md
... ...
@@ -27,7 +27,7 @@ nocite: |
27 27
|FL|GAMBL Exome |0.573 |
28 28
29 29
30
-[[include:mermaid_HIST1H4E.md]]
30
+[[include:tables/mermaid_HIST1H4E.md]]
31 31
32 32
## References
33 33
HIST1H4I.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_HIST1H4I.md]]
22
+[[include:tables/mermaid_HIST1H4I.md]]
23 23
24 24
## References
25 25
HIST2H2BE.md
... ...
@@ -34,6 +34,6 @@ This gene encodes the H2A protein, one of the core proteins comprising nucleosom
34 34
<!-- ORIGIN: schmitzGeneticsPathogenesisDiffuse2018a -->
35 35
<!-- DLBCL: schmitzGeneticsPathogenesisDiffuse2018a -->
36 36
37
-[[include:mermaid_HIST2H2BE.md]]
37
+[[include:tables/mermaid_HIST2H2BE.md]]
38 38
39 39
## References
HIST4H4.md
... ...
@@ -25,7 +25,7 @@ nocite: |
25 25
|DLBCL|GAMBL Genome |1.504 |
26 26
27 27
28
-[[include:mermaid_HIST4H4.md]]
28
+[[include:tables/mermaid_HIST4H4.md]]
29 29
30 30
## References
31 31
HK3.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_HK3.md]]
22
+[[include:tables/mermaid_HK3.md]]
23 23
24 24
## References
25 25
HLA-B.md
... ...
@@ -49,7 +49,7 @@ Driver mutations affecting this gene in DLBCL have been experimentally demonstra
49 49
## Expression
50 50
![](images/gene_expression/HLA-B_by_pathology.svg)
51 51
52
-[[include:mermaid_HLA-B.md]]
52
+[[include:tables/mermaid_HLA-B.md]]
53 53
54 54
## References
55 55
HLA-C.md
... ...
@@ -37,7 +37,7 @@ Driver mutations affecting this gene in DLBCL have been experimentally demonstra
37 37
<!-- ORIGIN: gomezUltraDeepSequencingReveals2023 -->
38 38
<!-- PMBL: gomezUltraDeepSequencingReveals2023 -->
39 39
40
-[[include:mermaid_HLA-C.md]]
40
+[[include:tables/mermaid_HLA-C.md]]
41 41
42 42
## References
43 43
HLA-DQA1.md
... ...
@@ -45,7 +45,7 @@ Mutations in this gene were first described in DLBCL and FL in 2021 by Hübschma
45 45
[SP193150](https://www.bcgsc.ca/downloads/morinlab/GAMBL/MALY/SP193150.html)
46 46
[SP59424](https://www.bcgsc.ca/downloads/morinlab/GAMBL/MALY/SP59424.html)
47 47
48
-[[include:mermaid_HLA-DQA1.md]]
48
+[[include:tables/mermaid_HLA-DQA1.md]]
49 49
50 50
## References
51 51
HLA-DQB1.md
... ...
@@ -34,6 +34,6 @@ nocite: |
34 34
<!-- ORIGIN: burkhardtClinicalRelevanceMolecular2022b -->
35 35
<!-- BL: burkhardtClinicalRelevanceMolecular2022b -->
36 36
37
-[[include:mermaid_HLA-DQB1.md]]
37
+[[include:tables/mermaid_HLA-DQB1.md]]
38 38
39 39
## References
HLA-DRB1.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_HLA-DRB1.md]]
22
+[[include:tables/mermaid_HLA-DRB1.md]]
23 23
24 24
## References
25 25
HMGB1.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_HMGB1.md]]
22
+[[include:tables/mermaid_HMGB1.md]]
23 23
24 24
## References
25 25
HNF1B.md
... ...
@@ -35,7 +35,7 @@ nocite: |
35 35
<!-- ORIGIN: pasqualucciAnalysisCodingGenome2011 -->
36 36
<!-- DLBCL: pasqualucciAnalysisCodingGenome2011 -->
37 37
38
-[[include:mermaid_HNF1B.md]]
38
+[[include:tables/mermaid_HNF1B.md]]
39 39
40 40
## References
41 41
HNRNPD.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_HNRNPD.md]]
22
+[[include:tables/mermaid_HNRNPD.md]]
23 23
24 24
## References
25 25
HNRNPH1.md
... ...
@@ -44,7 +44,7 @@ The common HNRNPH1 mutations cause deregulated splicing and increased expression
44 44
![](images/gene_expression/HNRNPH1_by_pathology.svg)
45 45
46 46
47
-[[include:mermaid_HNRNPH1.md]]
47
+[[include:tables/mermaid_HNRNPH1.md]]
48 48
49 49
## References
50 50
HNRNPR.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_HNRNPR.md]]
22
+[[include:tables/mermaid_HNRNPR.md]]
23 23
24 24
## References
25 25
HRAS.md
... ...
@@ -63,7 +63,7 @@ nocite: |
63 63
[Reddy_3845T](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Reddy/igv_reports/Reddy_3845T.html)
64 64
[Reddy_3851T](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Reddy/igv_reports/Reddy_3851T.html)
65 65
66
-[[include:mermaid_HRAS.md]]
66
+[[include:tables/mermaid_HRAS.md]]
67 67
68 68
## References
69 69
HRNR.md
... ...
@@ -28,7 +28,7 @@ nocite: |
28 28
|MCL|GAMBL Genome |0.585 |
29 29
30 30
31
-[[include:mermaid_HRNR.md]]
31
+[[include:tables/mermaid_HRNR.md]]
32 32
33 33
## References
34 34
HSF2.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_HSF2.md]]
22
+[[include:tables/mermaid_HSF2.md]]
23 23
24 24
## References
25 25
HVCN1.md
... ...
@@ -43,6 +43,6 @@ HVCN1, a voltage-gated proton channel, has been identified as recurrently mutate
43 43
<!-- ORIGIN: krysiakRecurrentSomaticMutations2017b -->
44 44
<!-- FL: krysiakRecurrentSomaticMutations2017b -->
45 45
46
-[[include:mermaid_HVCN1.md]]
46
+[[include:tables/mermaid_HVCN1.md]]
47 47
48 48
## References
ID3.md
... ...
@@ -40,7 +40,7 @@ The existence of mutations in DLBCL were described in 2012 by Schmitz et al[@sch
40 40
## Expression
41 41
![](images/gene_expression/ID3_by_pathology.svg)
42 42
43
-[[include:mermaid_ID3.md]]
43
+[[include:tables/mermaid_ID3.md]]
44 44
45 45
## References
46 46
IDH1.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_IDH1.md]]
22
+[[include:tables/mermaid_IDH1.md]]
23 23
24 24
## References
25 25
IER2.md
... ...
@@ -36,7 +36,7 @@ nocite: |
36 36
[RG115](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Morin_2013/RG115.html)
37 37
[RG136](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Morin_2013/RG136.html)
38 38
39
-[[include:mermaid_IER2.md]]
39
+[[include:tables/mermaid_IER2.md]]
40 40
41 41
## References
42 42
IFNGR1.md
... ...
@@ -40,7 +40,7 @@ nocite: |
40 40
[RG034](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Morin_2013/RG034.html)
41 41
[RG130](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Morin_2013/RG130.html)
42 42
43
-[[include:mermaid_IFNGR1.md]]
43
+[[include:tables/mermaid_IFNGR1.md]]
44 44
45 45
## References
46 46
IGLL5.md
... ...
@@ -35,7 +35,7 @@ nocite: |
35 35
## Expression
36 36
![](images/gene_expression/IGLL5_by_pathology.svg)
37 37
38
-[[include:mermaid_IGLL5.md]]
38
+[[include:tables/mermaid_IGLL5.md]]
39 39
40 40
## References
41 41
<!-- PMBL: deschGenotypingCirculatingTumor2020 -->
IKBKB.md
... ...
@@ -37,6 +37,6 @@ nocite: |
37 37
<!-- DLBCL: reddyGeneticFunctionalDrivers2017 -->
38 38
<!-- PMBL: wienandGenomicAnalysesFlowsorted2019b -->
39 39
40
-[[include:mermaid_IKBKB.md]]
40
+[[include:tables/mermaid_IKBKB.md]]
41 41
42 42
## References
IKBKE.md
... ...
@@ -43,7 +43,7 @@ Mutations in this gene were first described in DLBCL and FL in 2021 by Hübschma
43 43
[SP124977](https://www.bcgsc.ca/downloads/morinlab/GAMBL/MALY/SP124977.html)
44 44
[SP116668](https://www.bcgsc.ca/downloads/morinlab/GAMBL/MALY/SP116668.html)
45 45
46
-[[include:mermaid_IKBKE.md]]
46
+[[include:tables/mermaid_IKBKE.md]]
47 47
48 48
## References
49 49
IKZF3.md
... ...
@@ -66,7 +66,7 @@ Driver mutations affecting this gene in DLBCL have been experimentally demonstra
66 66
## Expression
67 67
![](images/gene_expression/IKZF3_by_pathology.svg)
68 68
69
-[[include:mermaid_IKZF3.md]]
69
+[[include:tables/mermaid_IKZF3.md]]
70 70
71 71
## References
72 72
IL13RA1.md
... ...
@@ -26,7 +26,7 @@ nocite: |
26 26
|FL|GAMBL Exome |0.287 |
27 27
28 28
29
-[[include:mermaid_IL13RA1.md]]
29
+[[include:tables/mermaid_IL13RA1.md]]
30 30
31 31
## References
32 32
IL1RAPL2.md
... ...
@@ -28,7 +28,7 @@ nocite: |
28 28
|MCL|GAMBL Genome |1.17 |
29 29
30 30
31
-[[include:mermaid_IL1RAPL2.md]]
31
+[[include:tables/mermaid_IL1RAPL2.md]]
32 32
33 33
## References
34 34
IL4R.md
... ...
@@ -50,6 +50,6 @@ Driver mutations affecting this gene in DLBCL have been experimentally demonstra
50 50
<!-- DLBCL: dunsCharacterizationDLBCLPMBL2021b -->
51 51
<!-- PMBL: viganoSomaticIL4RMutations2018b -->
52 52
53
-[[include:mermaid_IL4R.md]]
53
+[[include:tables/mermaid_IL4R.md]]
54 54
55 55
## References
IL6.md
... ...
@@ -41,7 +41,7 @@ nocite: |
41 41
[DLBCL-RICOVER_623-Tumor](https://bcgsc.ca/downloads/morinlab/GAMBL/Chapuy_2018/DLBCL-RICOVER_623-Tumor.html)
42 42
[DLBCL-RICOVER_704-Tumor](https://bcgsc.ca/downloads/morinlab/GAMBL/Chapuy_2018/DLBCL-RICOVER_704-Tumor.html)
43 43
44
-[[include:mermaid_IL6.md]]
44
+[[include:tables/mermaid_IL6.md]]
45 45
46 46
## References
47 47
IL6ST.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_IL6ST.md]]
22
+[[include:tables/mermaid_IL6ST.md]]
23 23
24 24
## References
25 25
INO80.md
... ...
@@ -39,7 +39,7 @@ Mutations in this gene were first described in DLBCL in 2013[@zhangGeneticHetero
39 39
<!-- ORIGIN: zhangGeneticHeterogeneityDiffuse2013 -->
40 40
<!-- DLBCL: zhangGeneticHeterogeneityDiffuse2013 -->
41 41
42
-[[include:mermaid_INO80.md]]
42
+[[include:tables/mermaid_INO80.md]]
43 43
44 44
## References
45 45
INSC.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_INSC.md]]
22
+[[include:tables/mermaid_INSC.md]]
23 23
24 24
## References
25 25
INTS6.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_INTS6.md]]
22
+[[include:tables/mermaid_INTS6.md]]
23 23
24 24
## References
25 25
IQGAP1.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_IQGAP1.md]]
22
+[[include:tables/mermaid_IQGAP1.md]]
23 23
24 24
## References
25 25
IQUB.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_IQUB.md]]
22
+[[include:tables/mermaid_IQUB.md]]
23 23
24 24
## References
25 25
IRF1.md
... ...
@@ -48,7 +48,7 @@ Mutations in this gene were first described in DLBCL and FL in 2021 by Hübschma
48 48
[SP116606](https://www.bcgsc.ca/downloads/morinlab/GAMBL/MALY/SP116606.html)
49 49
[SP59304](https://www.bcgsc.ca/downloads/morinlab/GAMBL/MALY/SP59304.html)
50 50
51
-[[include:mermaid_IRF1.md]]
51
+[[include:tables/mermaid_IRF1.md]]
52 52
53 53
## References
54 54
IRF2BP2.md
... ...
@@ -28,7 +28,7 @@ nocite: |
28 28
|MCL|GAMBL Genome |0.585 |
29 29
30 30
31
-[[include:mermaid_IRF2BP2.md]]
31
+[[include:tables/mermaid_IRF2BP2.md]]
32 32
33 33
## References
34 34
IRF4.md
... ...
@@ -52,7 +52,7 @@ There are a few mutation hotspots in this gene. The functional role of mutations
52 52
## Expression
53 53
![](images/gene_expression/IRF4_by_pathology.svg)
54 54
55
-[[include:mermaid_IRF4.md]]
55
+[[include:tables/mermaid_IRF4.md]]
56 56
57 57
## References
58 58
IRF8.md
... ...
@@ -63,7 +63,7 @@ Driver mutations affecting this gene in DLBCL/FL have been experimentally demons
63 63
## Expression
64 64
![](images/gene_expression/IRF8_by_pathology.svg)
65 65
66
-[[include:mermaid_IRF8.md]]
66
+[[include:tables/mermaid_IRF8.md]]
67 67
68 68
## References
69 69
[@wrightProbabilisticClassificationTool2020]
ITGA2.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_ITGA2.md]]
22
+[[include:tables/mermaid_ITGA2.md]]
23 23
24 24
## References
25 25
ITGA8.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_ITGA8.md]]
22
+[[include:tables/mermaid_ITGA8.md]]
23 23
24 24
## References
25 25
ITGB3.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_ITGB3.md]]
22
+[[include:tables/mermaid_ITGB3.md]]
23 23
24 24
## References
25 25
ITGB4.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_ITGB4.md]]
22
+[[include:tables/mermaid_ITGB4.md]]
23 23
24 24
## References
25 25
ITPKB.md
... ...
@@ -55,7 +55,7 @@ Driver mutations affecting this gene in DLBCL have been experimentally demonstra
55 55
<!-- PMBL: reichelFlowSortingExome2015a -->
56 56
<!-- DLBCL: schmitzGeneticsPathogenesisDiffuse2018a -->
57 57
58
-[[include:mermaid_ITPKB.md]]
58
+[[include:tables/mermaid_ITPKB.md]]
59 59
60 60
## References
61 61
ITPR1.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_ITPR1.md]]
22
+[[include:tables/mermaid_ITPR1.md]]
23 23
24 24
## References
25 25
ITPR3.md
... ...
@@ -48,7 +48,7 @@ nocite: |
48 48
[1065](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Love/1065_reports.html)
49 49
[742](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Love/742_reports.html)
50 50
51
-[[include:mermaid_ITPR3.md]]
51
+[[include:tables/mermaid_ITPR3.md]]
52 52
53 53
## References
54 54
JAG1.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_JAG1.md]]
22
+[[include:tables/mermaid_JAG1.md]]
23 23
24 24
## References
25 25
JAK1.md
... ...
@@ -47,6 +47,6 @@ Mutations in this gene were first described in DLBCL in 2013[@zhangGeneticHetero
47 47
<!-- DLBCL: zhangGeneticHeterogeneityDiffuse2013 -->
48 48
<!-- PMBL: mottokIntegrativeGenomicAnalysis2019b -->
49 49
50
-[[include:mermaid_JAK1.md]]
50
+[[include:tables/mermaid_JAK1.md]]
51 51
52 52
## References
JAK3.md
... ...
@@ -40,6 +40,6 @@ Mutations in this gene were first described in DLBCL in 2013[@zhangGeneticHetero
40 40
<!-- ORIGIN: zhangGeneticHeterogeneityDiffuse2013 -->
41 41
<!-- DLBCL: zhangGeneticHeterogeneityDiffuse2013 -->
42 42
43
-[[include:mermaid_JAK3.md]]
43
+[[include:tables/mermaid_JAK3.md]]
44 44
45 45
## References
JAKMIP2.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_JAKMIP2.md]]
22
+[[include:tables/mermaid_JAKMIP2.md]]
23 23
24 24
## References
25 25
JUNB.md
... ...
@@ -45,7 +45,7 @@ Mutations in this gene were reported to be inflated in the original results acco
45 45
<!-- PMBL: mottokIntegrativeGenomicAnalysis2019b -->
46 46
47 47
48
-[[include:mermaid_JUNB.md]]
48
+[[include:tables/mermaid_JUNB.md]]
49 49
50 50
## References
51 51
JUP.md
... ...
@@ -38,7 +38,7 @@ Mutations in this gene were first described in FL in 2021 by Hübschmann et al.[
38 38
[SP193801](https://www.bcgsc.ca/downloads/morinlab/GAMBL/MALY/SP193801.html)
39 39
[SP59448](https://www.bcgsc.ca/downloads/morinlab/GAMBL/MALY/SP59448.html)
40 40
41
-[[include:mermaid_JUP.md]]
41
+[[include:tables/mermaid_JUP.md]]
42 42
43 43
## References
44 44
KANK2.md
... ...
@@ -28,7 +28,7 @@ nocite: |
28 28
|MCL|GAMBL Genome |1.17 |
29 29
30 30
31
-[[include:mermaid_KANK2.md]]
31
+[[include:tables/mermaid_KANK2.md]]
32 32
33 33
## References
34 34
KAT6A.md
... ...
@@ -27,7 +27,7 @@ nocite: |
27 27
|FL|GAMBL Exome |0.86 |
28 28
29 29
30
-[[include:mermaid_KAT6A.md]]
30
+[[include:tables/mermaid_KAT6A.md]]
31 31
32 32
## References
33 33
KCMF1.md
... ...
@@ -35,6 +35,6 @@ nocite: |
35 35
<!-- ORIGIN: reddyGeneticFunctionalDrivers2017 -->
36 36
<!-- DLBCL: reddyGeneticFunctionalDrivers2017 -->
37 37
38
-[[include:mermaid_KCMF1.md]]
38
+[[include:tables/mermaid_KCMF1.md]]
39 39
40 40
## References
KCNA3.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_KCNA3.md]]
22
+[[include:tables/mermaid_KCNA3.md]]
23 23
24 24
## References
25 25
KCNAB3.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_KCNAB3.md]]
22
+[[include:tables/mermaid_KCNAB3.md]]
23 23
24 24
## References
25 25
KCNC2.md
... ...
@@ -27,7 +27,7 @@ nocite: |
27 27
|FL|GAMBL Exome |0.287 |
28 28
29 29
30
-[[include:mermaid_KCNC2.md]]
30
+[[include:tables/mermaid_KCNC2.md]]
31 31
32 32
## References
33 33
KCNJ6.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_KCNJ6.md]]
22
+[[include:tables/mermaid_KCNJ6.md]]
23 23
24 24
## References
25 25
KCNK10.md
... ...
@@ -42,7 +42,7 @@ nocite: |
42 42
<!-- ORIGIN: paneaWholeGenomeLandscape2019 -->
43 43
<!-- BL: paneaWholeGenomeLandscape2019 -->
44 44
45
-[[include:mermaid_KCNK10.md]]
45
+[[include:tables/mermaid_KCNK10.md]]
46 46
47 47
## References
48 48
KCNT2.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_KCNT2.md]]
22
+[[include:tables/mermaid_KCNT2.md]]
23 23
24 24
## References
25 25
KDM2B.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_KDM2B.md]]
22
+[[include:tables/mermaid_KDM2B.md]]
23 23
24 24
## References
25 25
KDM6A.md
... ...
@@ -27,7 +27,7 @@ nocite: |
27 27
|MCL|GAMBL Genome |0.585 |
28 28
29 29
30
-[[include:mermaid_KDM6A.md]]
30
+[[include:tables/mermaid_KDM6A.md]]
31 31
32 32
## References
33 33
KDR.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_KDR.md]]
22
+[[include:tables/mermaid_KDR.md]]
23 23
24 24
## References
25 25
KIAA1614.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_KIAA1614.md]]
22
+[[include:tables/mermaid_KIAA1614.md]]
23 23
24 24
## References
25 25
KIAA1671.md
... ...
@@ -27,7 +27,7 @@ nocite: |
27 27
|MCL|GAMBL Genome |4.678 |
28 28
29 29
30
-[[include:mermaid_KIAA1671.md]]
30
+[[include:tables/mermaid_KIAA1671.md]]
31 31
32 32
## References
33 33
KIF1C.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_KIF1C.md]]
22
+[[include:tables/mermaid_KIF1C.md]]
23 23
24 24
## References
25 25
KIF21B.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_KIF21B.md]]
22
+[[include:tables/mermaid_KIF21B.md]]
23 23
24 24
## References
25 25
KIF26A.md
... ...
@@ -28,7 +28,7 @@ nocite: |
28 28
|MCL|GAMBL Genome |2.339 |
29 29
30 30
31
-[[include:mermaid_KIF26A.md]]
31
+[[include:tables/mermaid_KIF26A.md]]
32 32
33 33
## References
34 34
KIFC3.md
... ...
@@ -58,7 +58,7 @@ Due to [minimal support](KIFC3#representative-mutations) in the original primary
58 58
[1060](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Love/1060_reports.html)
59 59
60 60
61
-[[include:mermaid_KIFC3.md]]
61
+[[include:tables/mermaid_KIFC3.md]]
62 62
63 63
## References
64 64
KIR3DL1.md
... ...
@@ -32,7 +32,7 @@ nocite: |
32 32
<!-- ORIGIN: russler-germainMutationsAssociatedProgression2023a -->
33 33
<!-- FL: russler-germainMutationsAssociatedProgression2023b -->
34 34
35
-[[include:mermaid_KIR3DL1.md]]
35
+[[include:tables/mermaid_KIR3DL1.md]]
36 36
37 37
## References
38 38
KIT.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_KIT.md]]
22
+[[include:tables/mermaid_KIT.md]]
23 23
24 24
## References
25 25
KITLG.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_KITLG.md]]
22
+[[include:tables/mermaid_KITLG.md]]
23 23
24 24
## References
25 25
KLB.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_KLB.md]]
22
+[[include:tables/mermaid_KLB.md]]
23 23
24 24
## References
25 25
KLC3.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_KLC3.md]]
22
+[[include:tables/mermaid_KLC3.md]]
23 23
24 24
## References
25 25
KLF2.md
... ...
@@ -56,7 +56,7 @@ Contradictory to this, the mutation pattern in DLBCL implies selective pressure
56 56
## Expression
57 57
![](images/gene_expression/KLF2_by_pathology.svg)
58 58
59
-[[include:mermaid_KLF2.md]]
59
+[[include:tables/mermaid_KLF2.md]]
60 60
61 61
## References
62 62
KLF4.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_KLF4.md]]
22
+[[include:tables/mermaid_KLF4.md]]
23 23
24 24
## References
25 25
KLHL14.md
... ...
@@ -45,3 +45,9 @@ Driver mutations affecting this gene in DLBCL have been experimentally demonstra
45 45
46 46
<!-- ORIGIN: zhangGeneticHeterogeneityDiffuse2013 -->
47 47
<!-- DLBCL: zhangGeneticHeterogeneityDiffuse2013 -->
48
+
49
+[[include:tables/mermaid_KLHL14.md]]
50
+
51
+## References
52
+
53
+
KLHL21.md
... ...
@@ -40,7 +40,7 @@ nocite: |
40 40
<!-- ORIGIN: schmitzGeneticsPathogenesisDiffuse2018 -->
41 41
<!-- DLBCL: schmitzGeneticsPathogenesisDiffuse2018 -->
42 42
43
-[[include:mermaid_KLHL21.md]]
43
+[[include:tables/mermaid_KLHL21.md]]
44 44
45 45
## References
46 46
KLHL26.md
... ...
@@ -34,6 +34,6 @@ nocite: |
34 34
<!-- ORIGIN: burkhardtClinicalRelevanceMolecular2022 -->
35 35
<!-- BL: burkhardtClinicalRelevanceMolecular2022 -->
36 36
37
-[[include:mermaid_KLHL26.md]]
37
+[[include:tables/mermaid_KLHL26.md]]
38 38
39 39
## References
KLHL6.md
... ...
@@ -71,7 +71,7 @@ Driver mutations affecting this gene in DLBCL/FL have been experimentally demons
71 71
![](images/gene_expression/KLHL6_by_pathology.svg)
72 72
<!-- ORIGIN: morinFrequentMutationHistonemodifying2011 -->
73 73
74
-[[include:mermaid_KLHL6.md]]
74
+[[include:tables/mermaid_KLHL6.md]]
75 75
76 76
## References
77 77
KLRC4.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_KLRC4.md]]
22
+[[include:tables/mermaid_KLRC4.md]]
23 23
24 24
## References
25 25
KMT2C.md
... ...
@@ -40,7 +40,7 @@ This gene has been reported to be recurrently mutated in DLBCL. The rate of muta
40 40
<!-- PMBL: sarkozyMutationalLandscapeGray2021a -->
41 41
42 42
43
-[[include:mermaid_KMT2C.md]]
43
+[[include:tables/mermaid_KMT2C.md]]
44 44
45 45
## References
46 46
KMT2D.md
... ...
@@ -49,7 +49,7 @@ Driver mutations affecting this gene in BL/DLBCL/FL have been experimentally dem
49 49
50 50
51 51
52
-[[include:mermaid_KMT2D.md]]
52
+[[include:tables/mermaid_KMT2D.md]]
53 53
54 54
## References
55 55
KRAS.md
... ...
@@ -43,7 +43,7 @@ Driver mutations affecting this gene in DLBCL have been experimentally demonstra
43 43
## Expression
44 44
![](images/gene_expression/KRAS_by_pathology.svg)
45 45
46
-[[include:mermaid_KRAS.md]]
46
+[[include:tables/mermaid_KRAS.md]]
47 47
48 48
## References
49 49
KRT6A.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_KRT6A.md]]
22
+[[include:tables/mermaid_KRT6A.md]]
23 23
24 24
## References
25 25
KRTAP5-5.md
... ...
@@ -23,7 +23,7 @@ nocite: |
23 23
|DLBCL|GAMBL Exome |0.216 |
24 24
25 25
26
-[[include:mermaid_KRTAP5-5.md]]
26
+[[include:tables/mermaid_KRTAP5-5.md]]
27 27
28 28
## References
29 29
LAMA5.md
... ...
@@ -35,6 +35,6 @@ nocite: |
35 35
<!-- ORIGIN: schmitzGeneticsPathogenesisDiffuse2018a -->
36 36
<!-- DLBCL: schmitzGeneticsPathogenesisDiffuse2018a -->
37 37
38
-[[include:mermaid_LAMA5.md]]
38
+[[include:tables/mermaid_LAMA5.md]]
39 39
40 40
## References
LAPTM5.md
... ...
@@ -51,7 +51,7 @@ Mutations in this gene were first described in DLBCL and FL in 2021 by [Hübschm
51 51
[SP193656](https://www.bcgsc.ca/downloads/morinlab/GAMBL/MALY/SP193656.html)
52 52
[SP116709](https://www.bcgsc.ca/downloads/morinlab/GAMBL/MALY/SP116709.html)
53 53
54
-[[include:mermaid_LAPTM5.md]]
54
+[[include:tables/mermaid_LAPTM5.md]]
55 55
56 56
## References
57 57
LCOR.md
... ...
@@ -41,6 +41,6 @@ LCOR (Ligand Dependent Nuclear Receptor Corepressor) is involved in the regulati
41 41
<!-- BL: 2 -->
42 42
<!-- DLBCL: arthurGenomewideDiscoverySomatic2018 -->
43 43
44
-[[include:mermaid_LCOR.md]]
44
+[[include:tables/mermaid_LCOR.md]]
45 45
46 46
## References
LEPR.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_LEPR.md]]
22
+[[include:tables/mermaid_LEPR.md]]
23 23
24 24
## References
25 25
LEPREL1.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_LEPREL1.md]]
22
+[[include:tables/mermaid_LEPREL1.md]]
23 23
24 24
## References
25 25
LIFR.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_LIFR.md]]
22
+[[include:tables/mermaid_LIFR.md]]
23 23
24 24
## References
25 25
LILRA2.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_LILRA2.md]]
22
+[[include:tables/mermaid_LILRA2.md]]
23 23
24 24
## References
25 25
LIMD2.md
... ...
@@ -26,7 +26,7 @@ nocite: |
26 26
|DLBCL|GAMBL Genome |1.316 |
27 27
28 28
29
-[[include:mermaid_LIMD2.md]]
29
+[[include:tables/mermaid_LIMD2.md]]
30 30
31 31
## References
32 32
LIN54.md
... ...
@@ -57,7 +57,7 @@ nocite: |
57 57
[Reddy_3827T](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Reddy/igv_reports/Reddy_3827T.html)
58 58
[Reddy_4000T](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Reddy/igv_reports/Reddy_4000T.html)
59 59
60
-[[include:mermaid_LIN54.md]]
60
+[[include:tables/mermaid_LIN54.md]]
61 61
62 62
## References
63 63
[@reddyGeneticFunctionalDrivers2017]
LIN7C.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_LIN7C.md]]
22
+[[include:tables/mermaid_LIN7C.md]]
23 23
24 24
## References
25 25
LPHN2.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_LPHN2.md]]
22
+[[include:tables/mermaid_LPHN2.md]]
23 23
24 24
## References
25 25
LPHN3.md
... ...
@@ -28,7 +28,7 @@ nocite: |
28 28
|MCL|GAMBL Genome |2.339 |
29 29
30 30
31
-[[include:mermaid_LPHN3.md]]
31
+[[include:tables/mermaid_LPHN3.md]]
32 32
33 33
## References
34 34
LPP.md
... ...
@@ -49,6 +49,6 @@ nocite: |
49 49
<!-- ORIGIN: arthurGenomewideDiscoverySomatic2018 -->
50 50
<!-- DLBCL: arthurGenomewideDiscoverySomatic2018 -->
51 51
52
-[[include:mermaid_LPP.md]]
52
+[[include:tables/mermaid_LPP.md]]
53 53
54 54
## References
LRAP.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_LRAP.md]]
22
+[[include:tables/mermaid_LRAP.md]]
23 23
24 24
## References
25 25
LRIG3.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_LRIG3.md]]
22
+[[include:tables/mermaid_LRIG3.md]]
23 23
24 24
## References
25 25
LRP1.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_LRP1.md]]
22
+[[include:tables/mermaid_LRP1.md]]
23 23
24 24
## References
25 25
LRP10.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_LRP10.md]]
22
+[[include:tables/mermaid_LRP10.md]]
23 23
24 24
## References
25 25
LRP12.md
... ...
@@ -44,7 +44,7 @@ Mutations in this gene were first described in DLBCL in 2021 by Hübschmann et a
44 44
[SP59460](https://www.bcgsc.ca/downloads/morinlab/GAMBL/MALY/SP59460.html)
45 45
[SP193258](https://www.bcgsc.ca/downloads/morinlab/GAMBL/MALY/SP193258.html)
46 46
47
-[[include:mermaid_LRP12.md]]
47
+[[include:tables/mermaid_LRP12.md]]
48 48
49 49
## References
50 50
LRP1B.md
... ...
@@ -28,7 +28,7 @@ nocite: |
28 28
|MCL|GAMBL Genome |5.848 |
29 29
30 30
31
-[[include:mermaid_LRP1B.md]]
31
+[[include:tables/mermaid_LRP1B.md]]
32 32
33 33
## References
34 34
LRP3.md
... ...
@@ -19,7 +19,7 @@ nocite: |
19 19
20 20
21 21
22
-[[include:mermaid_LRP3.md]]
22
+[[include:tables/mermaid_LRP3.md]]
23 23
24 24
## References
25 25
LRRN3.md
... ...
@@ -35,7 +35,7 @@ nocite: |
35 35
[RG075](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Morin_2013/RG075.html)
36 36
[RG111](https://www.bcgsc.ca/downloads/morinlab/GAMBL/Morin_2013/RG111.html)
37 37
38
-[[include:mermaid_LRRN3.md]]
38
+[[include:tables/mermaid_LRRN3.md]]
39 39
40 40
## References
41 41
LTB.md
... ...
@@ -43,7 +43,7 @@ LTB (Lymphotoxin Beta) is a member of the tumor necrosis factor (TNF) superfamil
43 43
44 44
![](images/gene_expression/LTB_by_pathology.svg)
45 45
46
-[[include:mermaid_LTB.md]]
46
+[[include:tables/mermaid_LTB.md]]
47 47
48 48
## References
49 49
<!-- ORIGIN: 29713087 -->
LUZP4.md
... ...
@@ -26,7 +26,7 @@ nocite: |
26 26
|FL|GAMBL Exome |0.86 |
27 27
28 28
29
-[[include:mermaid_LUZP4.md]]
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+[[include:tables/mermaid_LUZP4.md]]
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31 31
## References
32 32
LYN.md
... ...
@@ -44,7 +44,7 @@ LYN mutations have been reported in DLBCL but the rate is relatively rare in mos
44 44
[DLBCL-RICOVER_181-Tumor](https://bcgsc.ca/downloads/morinlab/GAMBL/Chapuy_2018/DLBCL-RICOVER_181-Tumor.html)
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[DLBCL-RICOVER_773-Tumor](https://bcgsc.ca/downloads/morinlab/GAMBL/Chapuy_2018/DLBCL-RICOVER_773-Tumor.html)
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-[[include:mermaid_LYN.md]]
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+[[include:tables/mermaid_LYN.md]]
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## References
50 50
LYST.md
... ...
@@ -19,7 +19,7 @@ nocite: |
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-[[include:mermaid_LYST.md]]
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+[[include:tables/mermaid_LYST.md]]
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## References
25 25
MAGEC1.md
... ...
@@ -41,7 +41,7 @@ nocite: |
41 41
<!-- ORIGIN: russler-germainMutationsAssociatedProgression2023a -->
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<!-- FL: russler-germainMutationsAssociatedProgression2023b -->
43 43
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-[[include:mermaid_MAGEC1.md]]
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+[[include:tables/mermaid_MAGEC1.md]]
45 45
46 46
## References
47 47
MAGEC2.md
... ...
@@ -28,7 +28,7 @@ nocite: |
28 28
|MCL|GAMBL Genome |0.585 |
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30 30
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-[[include:mermaid_MAGEC2.md]]
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+[[include:tables/mermaid_MAGEC2.md]]
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33 33
## References
34 34
MAGEC3.md
... ...
@@ -19,7 +19,7 @@ nocite: |
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-[[include:mermaid_MAGEC3.md]]
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+[[include:tables/mermaid_MAGEC3.md]]
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## References
25 25
MAGT1.md
... ...
@@ -35,7 +35,7 @@ nocite: |
35 35
<!-- ORIGIN: reddyGeneticFunctionalDrivers2017 -->
36 36
<!-- DLBCL: reddyGeneticFunctionalDrivers2017 -->
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-[[include:mermaid_MAGT1.md]]
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+[[include:tables/mermaid_MAGT1.md]]
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40 40
## References
41 41
MALAT1.md
... ...
@@ -39,7 +39,7 @@ nocite: |
39 39
<!-- ORIGIN: arthurGenomewideDiscoverySomatic2018 -->
40 40
<!-- DLBCL: arthurGenomewideDiscoverySomatic2018 -->
41 41
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-[[include:mermaid_MALAT1.md]]
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+[[include:tables/mermaid_MALAT1.md]]
43 43
44 44
## References
45 45
MAP2K1.md
... ...
@@ -43,7 +43,7 @@ Driver mutations affecting this gene in FL have been experimentally demonstrated
43 43
<!-- DLBCL: shinBRAFV600EMAP2K12015 -->
44 44
<!-- FL: louissaintPediatrictypeNodalFollicular2016a -->
45 45
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-[[include:mermaid_MAP2K1.md]]
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+[[include:tables/mermaid_MAP2K1.md]]
47 47
48 48
## References
49 49
MAP2K3.md
... ...
@@ -19,7 +19,7 @@ nocite: |
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22
-[[include:mermaid_MAP2K3.md]]
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+[[include:tables/mermaid_MAP2K3.md]]
23 23
24 24
## References
25 25
browser_KLHL14.md
... ...
@@ -9,8 +9,4 @@ View all variants in GenomePaint [hg19](https://morinlab.github.io/LLMPP/GAMBL/K
9 9
10 10
![](images/proteinpaint/KLHL14.svg)
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12
-[[include:mermaid_KLHL14.md]]
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-
14
-## References
15
-
16 12