7304d7f19d008037d12225f851d2246ecdfb05c1
MEF2B.md
| ... | ... | @@ -22,7 +22,6 @@ timeline |
| 22 | 22 | |Entity|Tier|Description | |
| 23 | 23 | |:------:|:----:|--------------------------------------| |
| 24 | 24 | ||2|relevance in MCL not firmly established[@beaLandscapeSomaticMutations2013]| |
| 25 | -| |2-a | aSHM target; Although recurrent, the relevance of mutations in BL is tenuous | |
|
| 26 | 25 | | |1-a | aSHM target and high-confidence DLBCL gene [@morinFrequentMutationHistonemodifying2011]| |
| 27 | 26 | | |1-a | aSHM target and high-confidence FL gene [@morinFrequentMutationHistonemodifying2011]| |
| 28 | 27 | |
| ... | ... | @@ -101,6 +100,5 @@ View all variants in GenomePaint [hg19](https://morinlab.github.io/LLMPP/GAMBL/M |
| 101 | 100 | <!-- DLBCL: morinFrequentMutationHistonemodifying2011 --> |
| 102 | 101 | <!-- MCL: beaLandscapeSomaticMutations2013 --> |
| 103 | 102 | <!-- FL: morinFrequentMutationHistonemodifying2011 --> |
| 104 | -<!-- BL: 2 --> |
|
| 105 | 103 | |
| 106 | 104 | ## References |
NRXN2.md
| ... | ... | @@ -19,7 +19,7 @@ timeline |
| 19 | 19 | |
| 20 | 20 | |Entity|Tier|Description | |
| 21 | 21 | |:------:|:----:|--------------------------------------| |
| 22 | -| |2-F |Failed QC| |
|
| 22 | +| |2-F |Failed QC[@loveGeneticLandscapeMutations2012]| |
|
| 23 | 23 | |
| 24 | 24 | ## Mutation incidence in large patient cohorts (GAMBL reanalysis) |
| 25 | 25 |
PRDM1.md
| ... | ... | @@ -17,7 +17,6 @@ timeline |
| 17 | 17 | |
| 18 | 18 | |Entity|Tier|Description | |
| 19 | 19 | |:------:|:----:|--------------------------------------| |
| 20 | -| |2 |relevance in BL not firmly established| |
|
| 21 | 20 | | |1 |high-confidence DLBCL gene [@pasqualucciInactivationPRDM1BLIMP12006a]| |
| 22 | 21 | |
| 23 | 22 | ## Mutation incidence in large patient cohorts (GAMBL reanalysis) |
RAC2.md
| ... | ... | @@ -20,7 +20,6 @@ timeline |
| 20 | 20 | |:------:|:----:|-----------------------------------------| |
| 21 | 21 | | |2 |relevance in DLBCL not firmly established[@hubschmannMutationalMechanismsShaping2021b]| |
| 22 | 22 | |
| 23 | -||2|relevance in BL not firmly established| |
|
| 24 | 23 | ## Mutation incidence in large patient cohorts (GAMBL reanalysis) |
| 25 | 24 | |
| 26 | 25 | |Entity|source |frequency (%)| |
TET2.md
| ... | ... | @@ -20,7 +20,6 @@ timeline |
| 20 | 20 | |:------:|:----:|--------------------------------------| |
| 21 | 21 | | |1 |high-confidence DLBCL gene [@albuquerqueEnhancingKnowledgeDiscovery2017a]| |
| 22 | 22 | |
| 23 | -||2|relevance in BL not firmly established| |
|
| 24 | 23 | ## Mutation incidence in large patient cohorts (GAMBL reanalysis) |
| 25 | 24 | |
| 26 | 25 | |Entity|source |frequency (%)| |