MEF2B.md
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@@ -36,11 +36,7 @@ timeline
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## Mutation pattern and selective pressure estimates
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-|Entity|aSHM|Significant selection|dN/dS (missense)|dN/dS (nonsense)|
40
-|:------:|:----:|:---------------------:|:----------------:|:----------------:|
41
-|BL |Yes |No | 2.449 | 0.000 |
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-|DLBCL |Yes |Yes | 22.928 |171.945 |
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-|FL |Yes |Yes |111.098 | 0.000 |
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+[[include:dnds_MEF2B.md]]
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## aSHM regions
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MEF2C.md
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## Mutation pattern and selective pressure estimates
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-|Entity|aSHM|Significant selection|dN/dS (missense)|dN/dS (nonsense)|
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-|:------:|:----:|:---------------------:|:----------------:|:----------------:|
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-|BL |Yes |No | 3.687 | 0.000 |
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-|DLBCL |Yes |No | 9.617 |13.957 |
38
-|FL |Yes |Yes |36.127 | 0.000 |
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+[[include:dnds_MEF2C.md]]
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## aSHM regions
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MGA.md
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## Mutation pattern and selective pressure estimates
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-|Entity|aSHM|Significant selection|dN/dS (missense)|dN/dS (nonsense)|
34
-|:------:|:----:|:---------------------:|:----------------:|:----------------:|
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-|DLBCL |No |No |1.432 |12.504 |
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-|BL |No |No |2.443 | 3.733 |
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-|FL |No |No |0.000 | 0.000 |
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+[[include:dnds_MGA.md]]
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View coding variants in ProteinPaint [hg19](https://morinlab.github.io/LLMPP/GAMBL/MGA_protein.html) or [hg38](https://morinlab.github.io/LLMPP/GAMBL/MGA_protein_hg38.html)
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MPEG1.md
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@@ -31,12 +31,7 @@ timeline
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## Mutation pattern and selective pressure estimates
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-|Entity|aSHM|Significant selection|dN/dS (missense)|dN/dS (nonsense)|
35
-|:------:|:----:|:---------------------:|:----------------:|:----------------:|
36
-|BL |No |No |1.434 |0.000 |
37
-|DLBCL |No |No |1.449 |1.685 |
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-|FL |No |No |4.371 |0.000 |
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-
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+[[include:dnds_MPEG1.md]]
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View coding variants in ProteinPaint [hg19](https://morinlab.github.io/LLMPP/GAMBL/MPEG1_protein.html) or [hg38](https://morinlab.github.io/LLMPP/GAMBL/MPEG1_protein_hg38.html)
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MTOR.md
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## Mutation pattern and selective pressure estimates
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-|Entity|aSHM|Significant selection|dN/dS (missense)|dN/dS (nonsense)|
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-|:------:|:----:|:---------------------:|:----------------:|:----------------:|
41
-|BL |No |No |1.204 |0 |
42
-|DLBCL |No |No |5.630 |0 |
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-|FL |No |No |1.429 |0 |
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+[[include:dnds_MTOR.md]]
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MYD88.md
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## Mutation pattern and selective pressure estimates
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-|Entity|aSHM|Significant selection|dN/dS (missense)|dN/dS (nonsense)|
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-|:------:|:----:|:---------------------:|:----------------:|:----------------:|
34
-|BL |No |No | 1.809 |0 |
35
-|DLBCL |No |Yes |56.390 |0 |
36
-|FL |No |No |17.159 |0 |
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-
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+[[include:dnds_MYD88.md]]
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## MYD88 Hotspots
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NFKBIA.md
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## Mutation pattern and selective pressure estimates
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-|Entity|aSHM|Significant selection|dN/dS (missense)|dN/dS (nonsense)|
37
-|:------:|:----:|:---------------------:|:----------------:|:----------------:|
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-|BL |No |No |3.358 |17.442 |
39
-|DLBCL |No |Yes |9.385 |40.878 |
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-|FL |No |No |0.000 |28.519 |
41
-
42
-
43
-
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+[[include:dnds_NFKBIA.md]]
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View coding variants in ProteinPaint [hg19](https://morinlab.github.io/LLMPP/GAMBL/NFKBIA_protein.html) or [hg38](https://morinlab.github.io/LLMPP/GAMBL/NFKBIA_protein_hg38.html)
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NFKBIE.md
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## Mutation pattern and selective pressure estimates
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-|Entity|aSHM|Significant selection|dN/dS (missense)|dN/dS (nonsense)|
38
-|:------:|:----:|:---------------------:|:----------------:|:----------------:|
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-|BL |No |No |2.702 | 0.000 |
40
-|DLBCL |No |Yes |8.732 |58.269 |
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-|FL |No |No |0.000 |46.628 |
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-
43
-
44
-
37
+[[include:dnds_NFKBIE.md]]
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View coding variants in ProteinPaint [hg19](https://morinlab.github.io/LLMPP/GAMBL/NFKBIE_protein.html) or [hg38](https://morinlab.github.io/LLMPP/GAMBL/NFKBIE_protein_hg38.html)
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