CXCR4.md
... ...
@@ -12,6 +12,7 @@ CXCR4 is one of [a number of genes](https://github.com/morinlab/LLMPP/wiki/ashm)
12 12
## History
13 13
Mutations in this gene were first described in DLBCL in 2012 by Khodabakhshi et al,<sup>1</sup> in FL in 2021 by Hübschmann et al<sup>2</sup> and in BL in 2019 by Panea et al.<sup>3</sup>
14 14
15
+<<Warn("The variants reported in this gene in BL failed QC")>>
15 16
16 17
```mermaid
17 18
%%{init: { 'logLevel': 'debug', 'theme': 'dark' } }%%
HIST1H3I.md
... ...
@@ -5,6 +5,8 @@ link-citations: true
5 5
---
6 6
# HIST1H3I
7 7
8
+<<Warn("The variants reported in this gene in BL failed QC")>>
9
+
8 10
## History
9 11
```mermaid
10 12
%%{init: { 'logLevel': 'debug', 'theme': 'dark' } }%%
PTEN.md
... ...
@@ -1,3 +1,8 @@
1
+---
2
+bibliography: 'morinlab.bib'
3
+csl: 'NLM.csl'
4
+link-citations: true
5
+---
1 6
# PTEN
2 7
3 8
## History
... ...
@@ -12,7 +17,7 @@ timeline
12 17
13 18
|Entity|Tier|Description |
14 19
|:------:|:----:|--------------------------|
15
-|![BL](images/icons/BL_tier1.png) |1 |high-confidence BL gene |
20
+|![BL](images/icons/BL_tier1.png) |1 |high-confidence BL gene [@loveGeneticLandscapeMutations2012]|
16 21
|![DLBCL](images/icons/DLBCL_tier1.png) |1 |high-confidence DLBCL gene|
17 22
18 23
## Mutation incidence in large patient cohorts (GAMBL reanalysis)
... ...
@@ -51,4 +56,4 @@ View all variants in GenomePaint [hg19](https://morinlab.github.io/LLMPP/GAMBL/P
51 56
<!-- BL: loveGeneticLandscapeMutations2012 -->
52 57
53 58
## References
54
-1. Love C, Sun Z, Jima D, Li G, Zhang J, Miles R, Richards KL, Dunphy CH, Choi WWL, Srivastava G, Lugar PL, Rizzieri DA, Lagoo AS, Bernal-Mizrachi L, Mann KP, Flowers CR, Naresh KN, Evens AM, Chadburn A, Gordon LI, Czader MB, Gill JI, Hsi ED, Greenough A, Moffitt AB, McKinney M, Banerjee A, Grubor V, Levy S, Dunson DB, Dave SS. The genetic landscape of mutations in Burkitt lymphoma. Nat Genet. 2012 Dec;44(12):1321–1325. PMCID: PMC3674561
59
+