9540422a9947a5d658d9303350db44aea2304e83
DLBCL_ZC3H12A.md
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| 1 | +<table class="table" style="margin-left: auto; margin-right: auto;"> |
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| 2 | + <thead> |
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| 3 | + <tr> |
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| 4 | + <th style="text-align:left;"> pathology </th> |
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| 5 | + <th style="text-align:left;"> Samples </th> |
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| 6 | + <th style="text-align:right;"> Incidence </th> |
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| 7 | + <th style="text-align:left;"> CI </th> |
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| 8 | + </tr> |
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| 9 | + </thead> |
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| 10 | +<tbody> |
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| 11 | + <tr> |
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| 12 | + <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 225, 212, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> DLBCL </td> |
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| 13 | + <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 225, 212, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> GAMBL without Reddy </td> |
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| 14 | + <td style="text-align:right;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 225, 212, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> <span style=" color: rgba(0, 0, 0, 255) !important;border-radius: 4px; padding-right: 4px; padding-left: 4px; background-color: rgba(255, 225, 212, 255) !important;">0.0454</span> </td> |
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| 15 | + <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 225, 212, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> [0.033,0.0578] </td> |
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| 16 | + </tr> |
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| 17 | + <tr> |
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| 18 | + <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 227, 215, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> DLBCL </td> |
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| 19 | + <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 227, 215, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> GAMBL with Reddy </td> |
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| 20 | + <td style="text-align:right;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 227, 215, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> <span style=" color: rgba(0, 0, 0, 255) !important;border-radius: 4px; padding-right: 4px; padding-left: 4px; background-color: rgba(255, 227, 215, 255) !important;">0.0417</span> </td> |
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| 21 | + <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 227, 215, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> [0.0319,0.0514] </td> |
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| 22 | + </tr> |
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| 23 | + <tr> |
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| 24 | + <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 231, 221, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> DLBCL </td> |
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| 25 | + <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 231, 221, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> BC </td> |
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| 26 | + <td style="text-align:right;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 231, 221, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> <span style=" color: rgba(0, 0, 0, 255) !important;border-radius: 4px; padding-right: 4px; padding-left: 4px; background-color: rgba(255, 231, 221, 255) !important;">0.0314</span> </td> |
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| 27 | + <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 231, 221, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> [0.0085,0.0543] </td> |
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| 28 | + </tr> |
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| 29 | + <tr> |
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| 30 | + <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 226, 214, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> DLBCL </td> |
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| 31 | + <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 226, 214, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> Dana-Farber </td> |
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| 32 | + <td style="text-align:right;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 226, 214, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> <span style=" color: rgba(0, 0, 0, 255) !important;border-radius: 4px; padding-right: 4px; padding-left: 4px; background-color: rgba(255, 226, 214, 255) !important;">0.0429</span> </td> |
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| 33 | + <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 226, 214, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> [0.0201,0.0657] </td> |
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| 34 | + </tr> |
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| 35 | + <tr> |
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| 36 | + <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(254, 219, 204, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> DLBCL </td> |
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| 37 | + <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(254, 219, 204, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> NCI </td> |
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| 38 | + <td style="text-align:right;color: rgba(0, 0, 0, 255) !important;background-color: rgba(254, 219, 204, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> <span style=" color: rgba(0, 0, 0, 255) !important;border-radius: 4px; padding-right: 4px; padding-left: 4px; background-color: rgba(254, 219, 204, 255) !important;">0.0596</span> </td> |
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| 39 | + <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(254, 219, 204, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> [0.0382,0.081] </td> |
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| 40 | + </tr> |
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| 41 | + <tr> |
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| 42 | + <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 229, 218, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> DLBCL </td> |
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| 43 | + <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 229, 218, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> Reddy </td> |
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| 44 | + <td style="text-align:right;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 229, 218, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> <span style=" color: rgba(0, 0, 0, 255) !important;border-radius: 4px; padding-right: 4px; padding-left: 4px; background-color: rgba(255, 229, 218, 255) !important;">0.0356</span> </td> |
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| 45 | + <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 229, 218, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> [0.0199,0.0513] </td> |
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| 46 | + </tr> |
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| 47 | + <tr> |
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| 48 | + <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 224, 211, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> DLBCL </td> |
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| 49 | + <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 224, 211, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> DLBCL_ICGC </td> |
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| 50 | + <td style="text-align:right;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 224, 211, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> <span style=" color: rgba(0, 0, 0, 255) !important;border-radius: 4px; padding-right: 4px; padding-left: 4px; background-color: rgba(255, 224, 211, 255) !important;">0.0471</span> </td> |
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| 51 | + <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 224, 211, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> [0.002,0.0921] </td> |
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| 52 | + </tr> |
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| 53 | +</tbody> |
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| 54 | +</table> |
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ZC3H12A.md
| ... | ... | @@ -24,13 +24,7 @@ timeline |
| 24 | 24 | |
| 25 | 25 | ## Mutation incidence in large patient cohorts (GAMBL reanalysis) |
| 26 | 26 | |
| 27 | -|Entity|source |frequency (%)| |
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| 28 | -|:------:|:--------------:|:-------------:| |
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| 29 | -|DLBCL |GAMBL genomes |2.68 | |
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| 30 | -|DLBCL |Schmitz cohort|5.96 | |
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| 31 | -|DLBCL |Reddy cohort |3.10 | |
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| 32 | -|DLBCL |Chapuy cohort |4.70 | |
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| 33 | -|FL |GAMBL genomes |0.46 | |
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| 27 | +[[include:DLBCL_ZC3H12A.md]] |
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| 34 | 28 | |
| 35 | 29 | ## Mutation pattern and selective pressure estimates |
| 36 | 30 |