9aa31426fb44b19e9783576bff99e27d25c95c70
BL_genes_with_bib.md
| ... | ... | @@ -6,28 +6,28 @@ |
| 6 | 6 | |
| 7 | 7 | | Gene | Tier | Relevant references | |
| 8 | 8 | |:------------------:|:----:|:-------------------------------------------------------------:| |
| 9 | -| [ARID1A](ARID1A) | 1 | (Love et al. 2012; Zhang et al. 2013; Krysiak et al. 2017) | |
|
| 9 | +| [ARID1A](ARID1A) | 1 | (Love et al. 2012; Krysiak et al. 2017; Zhang et al. 2013) | |
|
| 10 | 10 | | [BMP7](BMP7) | 1 | (Panea et al. 2019) | |
| 11 | -| [CCND3](CCND3) | 1 | (Richter et al. 2012; Morin et al. 2011) | |
|
| 11 | +| [CCND3](CCND3) | 1 | (Morin et al. 2011; Richter et al. 2012) | |
|
| 12 | 12 | | [CHD8](CHD8) | 1 | (Grande et al. 2019; Reddy et al. 2017) | |
| 13 | -| [DDX3X](DDX3X) | 1 | (Schmitz et al. 2018, 2012) | |
|
| 13 | +| [DDX3X](DDX3X) | 1 | (Schmitz et al. 2012, 2018) | |
|
| 14 | 14 | | [EIF4A1](EIF4A1) | 1 | (Panea et al. 2019) | |
| 15 | 15 | | [EPPK1](EPPK1) | 1 | (Panea et al. 2019) | |
| 16 | -| [FBXO11](FBXO11) | 1 | (Richter et al. 2012; Hübschmann et al. 2021) | |
|
| 16 | +| [FBXO11](FBXO11) | 1 | (Hübschmann et al. 2021; Richter et al. 2012) | |
|
| 17 | 17 | | [FOXO1](FOXO1) | 1 | (Schmitz et al. 2012; Morin et al. 2011) | |
| 18 | -| [GNA13](GNA13) | 1 | (Morin et al. 2011; Love et al. 2012) | |
|
| 19 | -| [GNAI2](GNAI2) | 1 | (Morin et al. 2013; Grande et al. 2019) | |
|
| 20 | -| [HNRNPU](HNRNPU) | 1 | (Panea et al. 2019; Reddy et al. 2017) | |
|
| 21 | -| [ID3](ID3) | 1 | (Richter et al. 2012; Schmitz et al. 2012) | |
|
| 22 | -| [KMT2D](KMT2D) | 1 | (Grande et al. 2019; Morin et al. 2011) | |
|
| 23 | -| [MYC](MYC) | 1 | (L. Pasqualucci et al. 2001; Johnston and Carroll 1992) | |
|
| 18 | +| [GNA13](GNA13) | 1 | (Love et al. 2012; Morin et al. 2011) | |
|
| 19 | +| [GNAI2](GNAI2) | 1 | (Grande et al. 2019; Morin et al. 2013) | |
|
| 20 | +| [HNRNPU](HNRNPU) | 1a | (Reddy et al. 2017; Panea et al. 2019) | |
|
| 21 | +| [ID3](ID3) | 1 | (Schmitz et al. 2012; Richter et al. 2012) | |
|
| 22 | +| [KMT2D](KMT2D) | 1 | (Morin et al. 2011; Grande et al. 2019) | |
|
| 23 | +| [MYC](MYC) | 1a | (Johnston and Carroll 1992; L. Pasqualucci et al. 2001) | |
|
| 24 | 24 | | [P2RY8](P2RY8) | 1 | (Muppidi et al. 2014; Lohr et al. 2012) | |
| 25 | -| [PHF6](PHF6) | 1 | (Thomas et al. 2023; Reddy et al. 2017) | |
|
| 25 | +| [PHF6](PHF6) | 1 | (Reddy et al. 2017; Thomas et al. 2023) | |
|
| 26 | 26 | | [PTEN](PTEN) | 1 | (Love et al. 2012) | |
| 27 | 27 | | [RFX7](RFX7) | 1 | (Grande et al. 2019) | |
| 28 | 28 | | [RHOA](RHOA) | 1 | (Richter et al. 2012) | |
| 29 | 29 | | [SIN3A](SIN3A) | 1 | (Grande et al. 2019) | |
| 30 | -| [SMARCA4](SMARCA4) | 1 | (Richter et al. 2012; Zhang et al. 2013; Krysiak et al. 2017) | |
|
| 30 | +| [SMARCA4](SMARCA4) | 1 | (Krysiak et al. 2017; Richter et al. 2012; Zhang et al. 2013) | |
|
| 31 | 31 | | [TCF3](TCF3) | 1 | (Schmitz et al. 2012) | |
| 32 | 32 | | [TCL1A](TCL1A) | 1 | (Grande et al. 2019) | |
| 33 | 33 | | [TFAP4](TFAP4) | 1 | (Grande et al. 2019) | |
| ... | ... | @@ -47,25 +47,25 @@ |
| 47 | 47 | | [ALPK2](ALPK2) | 2 | (Panea et al. 2019) | |
| 48 | 48 | | [ARHGEF1](ARHGEF1) | 2 | (Muppidi et al. 2014) | |
| 49 | 49 | | [ATP2C2](ATP2C2) | 2 | (Love et al. 2012) | |
| 50 | -| [BACH2](BACH2) | 2 | (Grande et al. 2019) | |
|
| 51 | -| [BCL2](BCL2) | 2 | (Burkhardt et al. 2022; Morin et al. 2011; Tanaka et al. 1992) | |
|
| 52 | -| [BCL6](BCL6) | 2 | (Morin et al. 2011; Love et al. 2012) | |
|
| 53 | -| [BCL7A](BCL7A) | 2 | (Arthur et al. 2018; Krysiak et al. 2017; Grande et al. 2019) | |
|
| 50 | +| [BACH2](BACH2) | 2a | (Grande et al. 2019) | |
|
| 51 | +| [BCL2](BCL2) | 2a | (Burkhardt et al. 2022; Morin et al. 2011; Tanaka et al. 1992) | |
|
| 52 | +| [BCL6](BCL6) | 2a | (Love et al. 2012; Morin et al. 2011) | |
|
| 53 | +| [BCL7A](BCL7A) | 2a | (Grande et al. 2019; Krysiak et al. 2017; Arthur et al. 2018) | |
|
| 54 | 54 | | [BRAF](BRAF) | 2 | (Love et al. 2012; Tiacci et al. 2011) | |
| 55 | 55 | | [BRD4](BRD4) | 2 | (Love et al. 2012) | |
| 56 | -| [BTG1](BTG1) | 2 | (Morin et al. 2011; Burkhardt et al. 2022) | |
|
| 57 | -| [BTG2](BTG2) | 2 | (Love et al. 2012; Morin et al. 2011) | |
|
| 56 | +| [BTG1](BTG1) | 2a | (Morin et al. 2011; Burkhardt et al. 2022) | |
|
| 57 | +| [BTG2](BTG2) | 2a | (Love et al. 2012; Morin et al. 2011) | |
|
| 58 | 58 | | [C16orf48](C16orf48) | 2 | (Schmitz et al. 2012) | |
| 59 | 59 | | [C6orf27](C6orf27) | 2 | (Love et al. 2012) | |
| 60 | 60 | | [CAD](CAD) | 2 | (Love et al. 2012) | |
| 61 | -| [CARD11](CARD11) | 2 | (Morin et al. 2011; Lenz et al. 2008; Panea et al. 2019) | |
|
| 61 | +| [CARD11](CARD11) | 2 | (Lenz et al. 2008; Morin et al. 2011; Panea et al. 2019) | |
|
| 62 | 62 | | [CARD4](CARD4) | 2 | (Love et al. 2012) | |
| 63 | 63 | | [CCNF](CCNF) | 2 | (Abate et al. 2015) | |
| 64 | 64 | | [CCT6B](CCT6B) | 2 | (Love et al. 2012) | |
| 65 | 65 | | [CD79A](CD79A) | 2 | (Burkhardt et al. 2022) | |
| 66 | 66 | | [CD79B](CD79B) | 2 | (Morin et al. 2011; Panea et al. 2019) | |
| 67 | -| [CD83](CD83) | 2 | (Russler-Germain et al. 2023; Morin et al. 2013; Panea et al. 2019) | |
|
| 68 | -| [CDC73](CDC73) | 2 | (Love et al. 2012; Reddy et al. 2017) | |
|
| 67 | +| [CD83](CD83) | 2a | (Morin et al. 2013; Panea et al. 2019; Russler-Germain et al. 2023) | |
|
| 68 | +| [CDC73](CDC73) | 2 | (Reddy et al. 2017; Love et al. 2012) | |
|
| 69 | 69 | | [CDH17](CDH17) | 2 | (Love et al. 2012) | |
| 70 | 70 | | [CDKN2A](CDKN2A) | 2 | (Morin et al. 2013; Grande et al. 2019) | |
| 71 | 71 | | [CDKN2C](CDKN2C) | 2 | (Thomas et al. 2023) | |
| ... | ... | @@ -74,74 +74,74 @@ |
| 74 | 74 | | [CPXM2](CPXM2) | 2 | (Burkhardt et al. 2022) | |
| 75 | 75 | | [CREBBP](CREBBP) | 2 | (Love et al. 2012; Laura Pasqualucci, Dominguez-Sola, et al. 2011) | |
| 76 | 76 | | [CTCF](CTCF) | 2 | (Panea et al. 2019) | |
| 77 | -| [CXCR4](CXCR4) | 2 | (Panea et al. 2019; Khodabakhshi et al. 2012; Krysiak et al. 2017) | |
|
| 77 | +| [CXCR4](CXCR4) | 2a | (Krysiak et al. 2017; Khodabakhshi et al. 2012; Panea et al. 2019) | |
|
| 78 | 78 | | [CYB5D1](CYB5D1) | 2 | (Love et al. 2012) | |
| 79 | 79 | | [CYP4F22](CYP4F22) | 2 | (Love et al. 2012) | |
| 80 | 80 | | [DHCR7](DHCR7) | 2 | (Schmitz et al. 2012) | |
| 81 | 81 | | [DLGAP1](DLGAP1) | 2 | (Love et al. 2012) | |
| 82 | 82 | | [DNMT1](DNMT1) | 2 | (Panea et al. 2019) | |
| 83 | -| [DTX1](DTX1) | 2 | (Schmitz et al. 2018; Panea et al. 2019) | |
|
| 83 | +| [DTX1](DTX1) | 2a | (Panea et al. 2019; Schmitz et al. 2018) | |
|
| 84 | 84 | | [E2F2](E2F2) | 2 | (Burkhardt et al. 2022) | |
| 85 | -| [EBF1](EBF1) | 2 | (Thomas et al. 2023; Bohle et al. 2013) | |
|
| 85 | +| [EBF1](EBF1) | 2a | (Bohle et al. 2013; Thomas et al. 2023) | |
|
| 86 | 86 | | [EDNRB](EDNRB) | 2 | (Burkhardt et al. 2022) | |
| 87 | 87 | | [EHD1](EHD1) | 2 | (Thomas et al. 2023) | |
| 88 | 88 | | [EIF2C4](EIF2C4) | 2 | (Love et al. 2012) | |
| 89 | 89 | | [ELP2](ELP2) | 2 | (Schmitz et al. 2012) | |
| 90 | 90 | | [EML2](EML2) | 2 | (Love et al. 2012) | |
| 91 | 91 | | [ENTPD3](ENTPD3) | 2 | (Love et al. 2012) | |
| 92 | -| [EP300](EP300) | 2 | (Panea et al. 2019; Laura Pasqualucci, Dominguez-Sola, et al. 2011) | |
|
| 92 | +| [EP300](EP300) | 2 | (Laura Pasqualucci, Dominguez-Sola, et al. 2011; Panea et al. 2019) | |
|
| 93 | 93 | | [EPHB2](EPHB2) | 2 | (Love et al. 2012) | |
| 94 | 94 | | [ERAP1](ERAP1) | 2 | (Burkhardt et al. 2022) | |
| 95 | -| [ETS1](ETS1) | 2 | (Panea et al. 2019; Morin et al. 2011) | |
|
| 95 | +| [ETS1](ETS1) | 2a | (Panea et al. 2019; Morin et al. 2011) | |
|
| 96 | 96 | | [EXOSC6](EXOSC6) | 2 | (Schmitz et al. 2012) | |
| 97 | -| [EZH2](EZH2) | 2 | (Love et al. 2012; Morin et al. 2010) | |
|
| 97 | +| [EZH2](EZH2) | 2 | (Morin et al. 2010; Love et al. 2012) | |
|
| 98 | 98 | | [FAM129B](FAM129B) | 2 | (Love et al. 2012) | |
| 99 | 99 | | [FGFR3](FGFR3) | 2 | (Love et al. 2012) | |
| 100 | 100 | | [FLYWCH1](FLYWCH1) | 2 | (Schmitz et al. 2012) | |
| 101 | 101 | | [FTCD](FTCD) | 2 | (Love et al. 2012) | |
| 102 | 102 | | [FZD3](FZD3) | 2 | (Panea et al. 2019) | |
| 103 | 103 | | [GGTLA4](GGTLA4) | 2 | (Love et al. 2012) | |
| 104 | -| [GRB2](GRB2) | 2 | (Panea et al. 2019; Laura Pasqualucci, Trifonov, et al. 2011) | |
|
| 104 | +| [GRB2](GRB2) | 2 | (Laura Pasqualucci, Trifonov, et al. 2011; Panea et al. 2019) | |
|
| 105 | 105 | | [GRIK5](GRIK5) | 2 | (Love et al. 2012) | |
| 106 | 106 | | [GTSE1](GTSE1) | 2 | (Schmitz et al. 2012) | |
| 107 | -| [HIST1H1C](HIST1H1C) | 2 | (Panea et al. 2019; Morin et al. 2011) | |
|
| 108 | -| [HIST1H1E](HIST1H1E) | 2 | (Grande et al. 2019; Krysiak et al. 2017; Morin et al. 2013) | |
|
| 109 | -| [HIST1H2AG](HIST1H2AG) | 2 | (Morin et al. 2013; Panea et al. 2019; Krysiak et al. 2017) | |
|
| 110 | -| [HIST1H2AM](HIST1H2AM) | 2 | (Krysiak et al. 2017; Panea et al. 2019) | |
|
| 111 | -| [HIST1H2BK](HIST1H2BK) | 2 | (Panea et al. 2019) | |
|
| 112 | -| [HIST1H3D](HIST1H3D) | 2 | (Panea et al. 2019) | |
|
| 113 | -| [HIST1H3H](HIST1H3H) | 2 | (Panea et al. 2019) | |
|
| 114 | -| [HIST1H3I](HIST1H3I) | 2 | (Krysiak et al. 2017; Panea et al. 2019) | |
|
| 115 | -| [HIST1H3J](HIST1H3J) | 2 | (Panea et al. 2019) | |
|
| 116 | -| [HIST1H4J](HIST1H4J) | 2 | (Panea et al. 2019) | |
|
| 107 | +| [HIST1H1C](HIST1H1C) | 2a | (Panea et al. 2019; Morin et al. 2011) | |
|
| 108 | +| [HIST1H1E](HIST1H1E) | 2a | (Morin et al. 2013; Grande et al. 2019; Krysiak et al. 2017) | |
|
| 109 | +| [HIST1H2AG](HIST1H2AG) | 2a | (Morin et al. 2013; Krysiak et al. 2017; Panea et al. 2019) | |
|
| 110 | +| [HIST1H2AM](HIST1H2AM) | 2a | (Panea et al. 2019; Krysiak et al. 2017) | |
|
| 111 | +| [HIST1H2BK](HIST1H2BK) | 2a | (Panea et al. 2019) | |
|
| 112 | +| [HIST1H3D](HIST1H3D) | 2a | (Panea et al. 2019) | |
|
| 113 | +| [HIST1H3H](HIST1H3H) | 2a | (Panea et al. 2019) | |
|
| 114 | +| [HIST1H3I](HIST1H3I) | 2a | (Panea et al. 2019; Krysiak et al. 2017) | |
|
| 115 | +| [HIST1H3J](HIST1H3J) | 2a | (Panea et al. 2019) | |
|
| 116 | +| [HIST1H4J](HIST1H4J) | 2a | (Panea et al. 2019) | |
|
| 117 | 117 | | [HLA-A](HLA-A) | 2 | | |
| 118 | 118 | | [HLA-B](HLA-B) | 2 | | |
| 119 | 119 | | [HLA-DMB](HLA-DMB) | 2 | | |
| 120 | 120 | | [HLA-DQB1](HLA-DQB1) | 2 | (Burkhardt et al. 2022) | |
| 121 | 121 | | [ICK](ICK) | 2 | (Love et al. 2012) | |
| 122 | -| [IGLL5](IGLL5) | 2 | (Panea et al. 2019; Russler-Germain et al. 2023) | |
|
| 123 | -| [IKZF3](IKZF3) | 2 | (Panea et al. 2019; Morin et al. 2013) | |
|
| 124 | -| [IRF8](IRF8) | 2 | (Morin et al. 2011; Panea et al. 2019) | |
|
| 122 | +| [IGLL5](IGLL5) | 2a | (Russler-Germain et al. 2023; Panea et al. 2019) | |
|
| 123 | +| [IKZF3](IKZF3) | 2a | (Panea et al. 2019; Morin et al. 2013) | |
|
| 124 | +| [IRF8](IRF8) | 2a | (Panea et al. 2019; Morin et al. 2011) | |
|
| 125 | 125 | | [ITPR3](ITPR3) | 2 | (Love et al. 2012) | |
| 126 | 126 | | [KANK2](KANK2) | 2 | (Schmitz et al. 2012) | |
| 127 | 127 | | [KCNK10](KCNK10) | 2 | (Panea et al. 2019) | |
| 128 | 128 | | [KIFC3](KIFC3) | 2 | (Love et al. 2012) | |
| 129 | 129 | | [KLHL26](KLHL26) | 2 | (Burkhardt et al. 2022) | |
| 130 | -| [KLHL6](KLHL6) | 2 | (Morin et al. 2011; Panea et al. 2019) | |
|
| 130 | +| [KLHL6](KLHL6) | 2a | (Morin et al. 2011; Panea et al. 2019) | |
|
| 131 | 131 | | [KMT2C](KMT2C) | 2 | (Zhou et al. 2019; Zhang et al. 2013) | |
| 132 | -| [LTB](LTB) | 2 | (Chapuy et al. 2018; Panea et al. 2019) | |
|
| 132 | +| [LTB](LTB) | 2a | (Panea et al. 2019; Chapuy et al. 2018) | |
|
| 133 | 133 | | [MAP3K6](MAP3K6) | 2 | (Love et al. 2012) | |
| 134 | -| [MCL1](MCL1) | 2 | (Reddy et al. 2017; Panea et al. 2019) | |
|
| 135 | -| [MIR142](MIR142) | 2 | (Kwanhian et al. 2012; Grande et al. 2019) | |
|
| 136 | -| [MKI67](MKI67) | 2 | (Schmitz et al. 2012; Russler-Germain et al. 2023) | |
|
| 134 | +| [MCL1](MCL1) | 2 | (Panea et al. 2019; Reddy et al. 2017) | |
|
| 135 | +| [MIR142](MIR142) | 2a | (Grande et al. 2019; Kwanhian et al. 2012) | |
|
| 136 | +| [MKI67](MKI67) | 2 | (Russler-Germain et al. 2023; Schmitz et al. 2012) | |
|
| 137 | 137 | | [MME](MME) | 2 | (Panea et al. 2019) | |
| 138 | -| [MTOR](MTOR) | 2 | (Panea et al. 2019; Zhang et al. 2013) | |
|
| 138 | +| [MTOR](MTOR) | 2 | (Zhang et al. 2013; Panea et al. 2019) | |
|
| 139 | 139 | | [MYH10](MYH10) | 2 | (Love et al. 2012) | |
| 140 | 140 | | [MYO18A](MYO18A) | 2 | (Schmitz et al. 2012) | |
| 141 | 141 | | [NBEAL1](NBEAL1) | 2 | (Love et al. 2012) | |
| 142 | 142 | | [NCOR2](NCOR2) | 2 | (Schmitz et al. 2012) | |
| 143 | 143 | | [NOA1](NOA1) | 2 | (Burkhardt et al. 2022) | |
| 144 | -| [NOTCH1](NOTCH1) | 2 | (Love et al. 2012; Laura Pasqualucci, Trifonov, et al. 2011) | |
|
| 144 | +| [NOTCH1](NOTCH1) | 2 | (Laura Pasqualucci, Trifonov, et al. 2011; Love et al. 2012) | |
|
| 145 | 145 | | [NOTCH2](NOTCH2) | 2 | (Trøen et al. 2008; Panea et al. 2019) | |
| 146 | 146 | | [NRXN2](NRXN2) | 2 | (Love et al. 2012) | |
| 147 | 147 | | [P2RY2](P2RY2) | 2 | (Love et al. 2012) | |
| ... | ... | @@ -151,8 +151,8 @@ |
| 151 | 151 | | [PCDHA11](PCDHA11) | 2 | (Panea et al. 2019) | |
| 152 | 152 | | [PDCD11](PDCD11) | 2 | (Schmitz et al. 2012) | |
| 153 | 153 | | [PDZRN3](PDZRN3) | 2 | (Panea et al. 2019) | |
| 154 | -| [PIK3R1](PIK3R1) | 2 | (Panea et al. 2019; Zhang et al. 2013) | |
|
| 155 | -| [PIM1](PIM1) | 2 | (Burkhardt et al. 2022; L. Pasqualucci et al. 2001) | |
|
| 154 | +| [PIK3R1](PIK3R1) | 2 | (Zhang et al. 2013; Panea et al. 2019) | |
|
| 155 | +| [PIM1](PIM1) | 2a | (L. Pasqualucci et al. 2001; Burkhardt et al. 2022) | |
|
| 156 | 156 | | [PLCG2](PLCG2) | 2 | (Panea et al. 2019) | |
| 157 | 157 | | [POLRMT](POLRMT) | 2 | (Love et al. 2012) | |
| 158 | 158 | | [POR](POR) | 2 | (Love et al. 2012) | |
| ... | ... | @@ -168,7 +168,7 @@ |
| 168 | 168 | | [REV3L](REV3L) | 2 | (Burkhardt et al. 2022) | |
| 169 | 169 | | [RNF144B](RNF144B) | 2 | (Panea et al. 2019) | |
| 170 | 170 | | [RPL10](RPL10) | 2 | (Burkhardt et al. 2022) | |
| 171 | -| [S1PR2](S1PR2) | 2 | (Muppidi et al. 2014; Morin et al. 2011) | |
|
| 171 | +| [S1PR2](S1PR2) | 2a | (Morin et al. 2011; Muppidi et al. 2014) | |
|
| 172 | 172 | | [SAL3](SAL3) | 2 | (Burkhardt et al. 2022) | |
| 173 | 173 | | [SALL3](SALL3) | 2 | (Love et al. 2012) | |
| 174 | 174 | | [SAPS2](SAPS2) | 2 | (Love et al. 2012) | |
| ... | ... | @@ -181,7 +181,7 @@ |
| 181 | 181 | | [SYNCRIP](SYNCRIP) | 2 | (Panea et al. 2019) | |
| 182 | 182 | | [SYNGAP1](SYNGAP1) | 2 | (Love et al. 2012) | |
| 183 | 183 | | [TBC1D9B](TBC1D9B) | 2 | (Love et al. 2012) | |
| 184 | -| [TET2](TET2) | 2 | (Panea et al. 2019; Albuquerque et al. 2017) | |
|
| 184 | +| [TET2](TET2) | 2 | (Albuquerque et al. 2017; Panea et al. 2019) | |
|
| 185 | 185 | | [TIGD6](TIGD6) | 2 | (Love et al. 2012) | |
| 186 | 186 | | [TOP2A](TOP2A) | 2 | (Schmitz et al. 2012) | |
| 187 | 187 | | [TPST2](TPST2) | 2 | (Love et al. 2012) | |
| ... | ... | @@ -194,7 +194,7 @@ |
| 194 | 194 | | [YY1AP1](YY1AP1) | 2 | (Schmitz et al. 2012) | |
| 195 | 195 | | [ZAN](ZAN) | 2 | (Burkhardt et al. 2022) | |
| 196 | 196 | | [ZBTB7A](ZBTB7A) | 2 | (Burkhardt et al. 2022; Reddy et al. 2017) | |
| 197 | -| [ZFP36L1](ZFP36L1) | 2 | (Panea et al. 2019; Morin et al. 2011) | |
|
| 197 | +| [ZFP36L1](ZFP36L1) | 2a | (Morin et al. 2011; Panea et al. 2019) | |
|
| 198 | 198 | | [ZNF229](ZNF229) | 2 | (Love et al. 2012) | |
| 199 | 199 | | [ZNF85](ZNF85) | 2 | (Burkhardt et al. 2022) | |
| 200 | 200 |
DLBCL_genes_with_bib.md
| ... | ... | @@ -6,66 +6,66 @@ |
| 6 | 6 | |
| 7 | 7 | | Gene | Tier | Relevant references | |
| 8 | 8 | |:----------------------:|:----:|:-------------------------------------------------------------------:| |
| 9 | -| [ACTB](ACTB) | 1 | (Lohr et al. 2012) | |
|
| 10 | -| [ACTG1](ACTG1) | 1 | (Hübschmann et al. 2021) | |
|
| 11 | -| [ARID1A](ARID1A) | 1 | (Love et al. 2012; Krysiak et al. 2017; Zhang et al. 2013) | |
|
| 9 | +| [ACTB](ACTB) | 1a | (Lohr et al. 2012) | |
|
| 10 | +| [ACTG1](ACTG1) | 1a | (Hübschmann et al. 2021) | |
|
| 11 | +| [ARID1A](ARID1A) | 1 | (Krysiak et al. 2017; Love et al. 2012; Zhang et al. 2013) | |
|
| 12 | 12 | | [ATM](ATM) | 1 | (Reddy et al. 2017) | |
| 13 | 13 | | [B2M](B2M) | 1 | (Morin et al. 2011) | |
| 14 | -| [BCL10](BCL10) | 1 | (Russler-Germain et al. 2023; Morin et al. 2011) | |
|
| 15 | -| [BCL11A](BCL11A) | 1 | | |
|
| 16 | -| [BCL2](BCL2) | 1 | (Tanaka et al. 1992; Burkhardt et al. 2022; Morin et al. 2011) | |
|
| 17 | -| [BCL6](BCL6) | 1 | (Love et al. 2012; Morin et al. 2011) | |
|
| 18 | -| [BCL7A](BCL7A) | 1 | (Arthur et al. 2018; Grande et al. 2019; Krysiak et al. 2017) | |
|
| 14 | +| [BCL10](BCL10) | 1 | (Morin et al. 2011; Russler-Germain et al. 2023) | |
|
| 15 | +| [BCL11A](BCL11A) | 1a | | |
|
| 16 | +| [BCL2](BCL2) | 1a | (Tanaka et al. 1992; Morin et al. 2011; Burkhardt et al. 2022) | |
|
| 17 | +| [BCL6](BCL6) | 1a | (Love et al. 2012; Morin et al. 2011) | |
|
| 18 | +| [BCL7A](BCL7A) | 1a | (Grande et al. 2019; Krysiak et al. 2017; Arthur et al. 2018) | |
|
| 19 | 19 | | [BCOR](BCOR) | 1 | | |
| 20 | 20 | | [BCR](BCR) | 1 | | |
| 21 | 21 | | [BIRC6](BIRC6) | 1 | (Reddy et al. 2017) | |
| 22 | -| [BRAF](BRAF) | 1 | (Tiacci et al. 2011; Love et al. 2012) | |
|
| 23 | -| [BTG1](BTG1) | 1 | (Burkhardt et al. 2022; Morin et al. 2011) | |
|
| 24 | -| [BTG2](BTG2) | 1 | (Love et al. 2012; Morin et al. 2011) | |
|
| 22 | +| [BRAF](BRAF) | 1 | (Love et al. 2012; Tiacci et al. 2011) | |
|
| 23 | +| [BTG1](BTG1) | 1a | (Burkhardt et al. 2022; Morin et al. 2011) | |
|
| 24 | +| [BTG2](BTG2) | 1a | (Love et al. 2012; Morin et al. 2011) | |
|
| 25 | 25 | | [BTK](BTK) | 1 | (Albuquerque et al. 2017; Krysiak et al. 2017) | |
| 26 | 26 | | [CARD11](CARD11) | 1 | (Panea et al. 2019; Morin et al. 2011; Lenz et al. 2008) | |
| 27 | 27 | | [CASP8](CASP8) | 1 | (Reddy et al. 2017) | |
| 28 | -| [CCND3](CCND3) | 1 | (Richter et al. 2012; Morin et al. 2011) | |
|
| 28 | +| [CCND3](CCND3) | 1 | (Morin et al. 2011; Richter et al. 2012) | |
|
| 29 | 29 | | [CD274](CD274) | 1 | (Morin et al. 2011) | |
| 30 | 30 | | [CD36](CD36) | 1 | (Laura Pasqualucci, Trifonov, et al. 2011) | |
| 31 | 31 | | [CD58](CD58) | 1 | (Morin et al. 2011) | |
| 32 | 32 | | [CD70](CD70) | 1 | (Morin et al. 2011; Russler-Germain et al. 2023) | |
| 33 | 33 | | [CD79B](CD79B) | 1 | (Panea et al. 2019; Morin et al. 2011) | |
| 34 | -| [CD83](CD83) | 1 | (Russler-Germain et al. 2023; Panea et al. 2019; Morin et al. 2013) | |
|
| 35 | -| [CDKN2A](CDKN2A) | 1 | (Morin et al. 2013; Grande et al. 2019) | |
|
| 36 | -| [CIITA](CIITA) | 1 | (Morin et al. 2011) | |
|
| 34 | +| [CD83](CD83) | 1a | (Russler-Germain et al. 2023; Panea et al. 2019; Morin et al. 2013) | |
|
| 35 | +| [CDKN2A](CDKN2A) | 1 | (Grande et al. 2019; Morin et al. 2013) | |
|
| 36 | +| [CIITA](CIITA) | 1a | (Morin et al. 2011) | |
|
| 37 | 37 | | [CREBBP](CREBBP) | 1 | (Love et al. 2012; Laura Pasqualucci, Dominguez-Sola, et al. 2011) | |
| 38 | -| [CXCR4](CXCR4) | 1 | (Panea et al. 2019; Krysiak et al. 2017; Khodabakhshi et al. 2012) | |
|
| 38 | +| [CXCR4](CXCR4) | 1a | (Khodabakhshi et al. 2012; Panea et al. 2019; Krysiak et al. 2017) | |
|
| 39 | 39 | | [CXCR5](CXCR5) | 1 | (Schmitz et al. 2018) | |
| 40 | 40 | | [DAZAP1](DAZAP1) | 1 | (Pararajalingam et al. 2020) | |
| 41 | -| [DDX3X](DDX3X) | 1 | (Schmitz et al. 2012, 2018) | |
|
| 42 | -| [DTX1](DTX1) | 1 | (Schmitz et al. 2018; Panea et al. 2019) | |
|
| 43 | -| [DUSP2](DUSP2) | 1 | (Morin et al. 2013) | |
|
| 44 | -| [EBF1](EBF1) | 1 | (Bohle et al. 2013; Thomas et al. 2023) | |
|
| 41 | +| [DDX3X](DDX3X) | 1 | (Schmitz et al. 2018, 2012) | |
|
| 42 | +| [DTX1](DTX1) | 1a | (Schmitz et al. 2018; Panea et al. 2019) | |
|
| 43 | +| [DUSP2](DUSP2) | 1a | (Morin et al. 2013) | |
|
| 44 | +| [EBF1](EBF1) | 1a | (Bohle et al. 2013; Thomas et al. 2023) | |
|
| 45 | 45 | | [EEF1A1](EEF1A1) | 1 | (Hübschmann et al. 2021) | |
| 46 | 46 | | [EP300](EP300) | 1 | (Laura Pasqualucci, Dominguez-Sola, et al. 2011; Panea et al. 2019) | |
| 47 | -| [ETS1](ETS1) | 1 | (Morin et al. 2011; Panea et al. 2019) | |
|
| 48 | -| [ETV6](ETV6) | 1 | (Arthur et al. 2018) | |
|
| 49 | -| [EZH2](EZH2) | 1 | (Morin et al. 2010; Love et al. 2012) | |
|
| 47 | +| [ETS1](ETS1) | 1a | (Morin et al. 2011; Panea et al. 2019) | |
|
| 48 | +| [ETV6](ETV6) | 1a | (Arthur et al. 2018) | |
|
| 49 | +| [EZH2](EZH2) | 1 | (Love et al. 2012; Morin et al. 2010) | |
|
| 50 | 50 | | [FAS](FAS) | 1 | (Scholl et al. 2007) | |
| 51 | 51 | | [FBXO11](FBXO11) | 1 | (Hübschmann et al. 2021; Richter et al. 2012) | |
| 52 | 52 | | [FBXW7](FBXW7) | 1 | (Zhang et al. 2013) | |
| 53 | 53 | | [FOXC1](FOXC1) | 1 | (Schmitz et al. 2018) | |
| 54 | -| [FOXO1](FOXO1) | 1 | (Morin et al. 2011; Schmitz et al. 2012) | |
|
| 55 | -| [GNA13](GNA13) | 1 | (Love et al. 2012; Morin et al. 2011) | |
|
| 54 | +| [FOXO1](FOXO1) | 1 | (Schmitz et al. 2012; Morin et al. 2011) | |
|
| 55 | +| [GNA13](GNA13) | 1 | (Morin et al. 2011; Love et al. 2012) | |
|
| 56 | 56 | | [GNAI2](GNAI2) | 1 | (Morin et al. 2013; Grande et al. 2019) | |
| 57 | 57 | | [GRB2](GRB2) | 1 | (Panea et al. 2019; Laura Pasqualucci, Trifonov, et al. 2011) | |
| 58 | -| [GRHPR](GRHPR) | 1 | (Arthur et al. 2018) | |
|
| 59 | -| [HIST1H1B](HIST1H1B) | 1 | (Chapuy et al. 2018; Krysiak et al. 2017) | |
|
| 60 | -| [HIST1H1C](HIST1H1C) | 1 | (Panea et al. 2019; Morin et al. 2011) | |
|
| 61 | -| [HIST1H1D](HIST1H1D) | 1 | (Krysiak et al. 2017; Morin et al. 2013) | |
|
| 62 | -| [HIST1H1E](HIST1H1E) | 1 | (Morin et al. 2013; Grande et al. 2019; Krysiak et al. 2017) | |
|
| 63 | -| [HIST1H2AC](HIST1H2AC) | 1 | (Morin et al. 2013; Krysiak et al. 2017) | |
|
| 64 | -| [HIST1H2AM](HIST1H2AM) | 1 | (Panea et al. 2019; Krysiak et al. 2017) | |
|
| 65 | -| [HIST1H2BC](HIST1H2BC) | 1 | (Reddy et al. 2017; Krysiak et al. 2017) | |
|
| 66 | -| [HIST1H2BK](HIST1H2BK) | 1 | (Panea et al. 2019) | |
|
| 67 | -| [HIST1H3B](HIST1H3B) | 1 | (Zhang et al. 2013) | |
|
| 68 | -| [HIST2H2BE](HIST2H2BE) | 1 | (Schmitz et al. 2018) | |
|
| 58 | +| [GRHPR](GRHPR) | 1a | (Arthur et al. 2018) | |
|
| 59 | +| [HIST1H1B](HIST1H1B) | 1a | (Chapuy et al. 2018; Krysiak et al. 2017) | |
|
| 60 | +| [HIST1H1C](HIST1H1C) | 1a | (Panea et al. 2019; Morin et al. 2011) | |
|
| 61 | +| [HIST1H1D](HIST1H1D) | 1a | (Krysiak et al. 2017; Morin et al. 2013) | |
|
| 62 | +| [HIST1H1E](HIST1H1E) | 1a | (Grande et al. 2019; Morin et al. 2013; Krysiak et al. 2017) | |
|
| 63 | +| [HIST1H2AC](HIST1H2AC) | 1a | (Morin et al. 2013; Krysiak et al. 2017) | |
|
| 64 | +| [HIST1H2AM](HIST1H2AM) | 1a | (Panea et al. 2019; Krysiak et al. 2017) | |
|
| 65 | +| [HIST1H2BC](HIST1H2BC) | 1a | (Krysiak et al. 2017; Reddy et al. 2017) | |
|
| 66 | +| [HIST1H2BK](HIST1H2BK) | 1a | (Panea et al. 2019) | |
|
| 67 | +| [HIST1H3B](HIST1H3B) | 1a | (Zhang et al. 2013) | |
|
| 68 | +| [HIST2H2BE](HIST2H2BE) | 1a | (Schmitz et al. 2018) | |
|
| 69 | 69 | | [HLA-A](HLA-A) | 1 | | |
| 70 | 70 | | [HLA-B](HLA-B) | 1 | | |
| 71 | 71 | | [HLA-C](HLA-C) | 1 | | |
| ... | ... | @@ -74,52 +74,52 @@ |
| 74 | 74 | | [HLA-DQA1](HLA-DQA1) | 1 | (Hübschmann et al. 2021) | |
| 75 | 75 | | [HNRNPD](HNRNPD) | 1 | | |
| 76 | 76 | | [HNRNPH1](HNRNPH1) | 1 | (Pararajalingam et al. 2020) | |
| 77 | -| [HNRNPU](HNRNPU) | 1 | (Reddy et al. 2017; Panea et al. 2019) | |
|
| 77 | +| [HNRNPU](HNRNPU) | 1 | (Panea et al. 2019; Reddy et al. 2017) | |
|
| 78 | 78 | | [HVCN1](HVCN1) | 1 | (Krysiak et al. 2017) | |
| 79 | -| [IKZF3](IKZF3) | 1 | (Morin et al. 2013; Panea et al. 2019) | |
|
| 79 | +| [IKZF3](IKZF3) | 1 | (Panea et al. 2019; Morin et al. 2013) | |
|
| 80 | 80 | | [IL16](IL16) | 1 | | |
| 81 | -| [IL4R](IL4R) | 1 | (Duns et al. 2021) | |
|
| 82 | -| [IRF4](IRF4) | 1 | (Morin et al. 2011) | |
|
| 83 | -| [IRF8](IRF8) | 1 | (Morin et al. 2011; Panea et al. 2019) | |
|
| 84 | -| [ITPKB](ITPKB) | 1 | (Schmitz et al. 2018) | |
|
| 81 | +| [IL4R](IL4R) | 1a | (Duns et al. 2021) | |
|
| 82 | +| [IRF4](IRF4) | 1a | (Morin et al. 2011) | |
|
| 83 | +| [IRF8](IRF8) | 1a | (Panea et al. 2019; Morin et al. 2011) | |
|
| 84 | +| [ITPKB](ITPKB) | 1a | (Schmitz et al. 2018) | |
|
| 85 | 85 | | [JUNB](JUNB) | 1 | (Reddy et al. 2017) | |
| 86 | -| [KLF2](KLF2) | 1 | (Laura Pasqualucci, Trifonov, et al. 2011) | |
|
| 86 | +| [KLF2](KLF2) | 1a | (Laura Pasqualucci, Trifonov, et al. 2011) | |
|
| 87 | 87 | | [KLHL14](KLHL14) | 1 | (Zhang et al. 2013) | |
| 88 | -| [KLHL6](KLHL6) | 1 | (Panea et al. 2019; Morin et al. 2011) | |
|
| 89 | -| [KMT2C](KMT2C) | 1 | (Zhang et al. 2013; Zhou et al. 2019) | |
|
| 88 | +| [KLHL6](KLHL6) | 1a | (Panea et al. 2019; Morin et al. 2011) | |
|
| 89 | +| [KMT2C](KMT2C) | 1 | (Zhou et al. 2019; Zhang et al. 2013) | |
|
| 90 | 90 | | [KMT2D](KMT2D) | 1 | (Grande et al. 2019; Morin et al. 2011) | |
| 91 | 91 | | [KRAS](KRAS) | 1 | (Lohr et al. 2012) | |
| 92 | 92 | | [LCOR](LCOR) | 1 | (Arthur et al. 2018) | |
| 93 | -| [LTB](LTB) | 1 | (Chapuy et al. 2018; Panea et al. 2019) | |
|
| 93 | +| [LTB](LTB) | 1a | (Chapuy et al. 2018; Panea et al. 2019) | |
|
| 94 | 94 | | [LYN](LYN) | 1 | (Chapuy et al. 2018) | |
| 95 | -| [MCL1](MCL1) | 1 | (Panea et al. 2019; Reddy et al. 2017) | |
|
| 96 | -| [MEF2B](MEF2B) | 1 | (Morin et al. 2011) | |
|
| 97 | -| [MEF2C](MEF2C) | 1 | (Arthur et al. 2018) | |
|
| 95 | +| [MCL1](MCL1) | 1 | (Reddy et al. 2017; Panea et al. 2019) | |
|
| 96 | +| [MEF2B](MEF2B) | 1a | (Morin et al. 2011) | |
|
| 97 | +| [MEF2C](MEF2C) | 1a | (Arthur et al. 2018) | |
|
| 98 | 98 | | [MGA](MGA) | 1 | (Zhang et al. 2013) | |
| 99 | 99 | | [MPEG1](MPEG1) | 1 | (Morin et al. 2013) | |
| 100 | -| [MS4A1](MS4A1) | 1 | (Rushton et al. 2020) | |
|
| 100 | +| [MS4A1](MS4A1) | 1a | (Rushton et al. 2020) | |
|
| 101 | 101 | | [MTOR](MTOR) | 1 | (Zhang et al. 2013; Panea et al. 2019) | |
| 102 | -| [MYC](MYC) | 1 | (Johnston and Carroll 1992; L. Pasqualucci et al. 2001) | |
|
| 102 | +| [MYC](MYC) | 1a | (Johnston and Carroll 1992; L. Pasqualucci et al. 2001) | |
|
| 103 | 103 | | [MYD88](MYD88) | 1 | (Ngo et al. 2011) | |
| 104 | 104 | | [MYOM2](MYOM2) | 1 | (Laura Pasqualucci, Trifonov, et al. 2011) | |
| 105 | 105 | | [NCOR2](NCOR2) | 1 | (Schmitz et al. 2012) | |
| 106 | 106 | | [NFKB1](NFKB1) | 1 | | |
| 107 | -| [NFKBIA](NFKBIA) | 1 | (Lake et al. 2009; Russler-Germain et al. 2023) | |
|
| 107 | +| [NFKBIA](NFKBIA) | 1 | (Russler-Germain et al. 2023; Lake et al. 2009) | |
|
| 108 | 108 | | [NFKBIE](NFKBIE) | 1 | (Morin et al. 2016) | |
| 109 | -| [NFKBIZ](NFKBIZ) | 1 | (Morin et al. 2016) | |
|
| 109 | +| [NFKBIZ](NFKBIZ) | 1a | (Morin et al. 2016) | |
|
| 110 | 110 | | [NLRC5](NLRC5) | 1 | | |
| 111 | 111 | | [NOL9](NOL9) | 1 | (Schmitz et al. 2018) | |
| 112 | -| [NOTCH1](NOTCH1) | 1 | (Laura Pasqualucci, Trifonov, et al. 2011; Love et al. 2012) | |
|
| 113 | -| [NOTCH2](NOTCH2) | 1 | (Trøen et al. 2008; Panea et al. 2019) | |
|
| 114 | -| [OSBPL10](OSBPL10) | 1 | (Arthur et al. 2018) | |
|
| 115 | -| [P2RY8](P2RY8) | 1 | (Muppidi et al. 2014; Lohr et al. 2012) | |
|
| 112 | +| [NOTCH1](NOTCH1) | 1 | (Love et al. 2012; Laura Pasqualucci, Trifonov, et al. 2011) | |
|
| 113 | +| [NOTCH2](NOTCH2) | 1 | (Panea et al. 2019; Trøen et al. 2008) | |
|
| 114 | +| [OSBPL10](OSBPL10) | 1a | (Arthur et al. 2018) | |
|
| 115 | +| [P2RY8](P2RY8) | 1 | (Lohr et al. 2012; Muppidi et al. 2014) | |
|
| 116 | 116 | | [PCBP1](PCBP1) | 1 | (Schmitz et al. 2012) | |
| 117 | -| [PIM1](PIM1) | 1 | (Burkhardt et al. 2022; L. Pasqualucci et al. 2001) | |
|
| 118 | -| [PIM2](PIM2) | 1 | (Arthur et al. 2018) | |
|
| 119 | -| [POU2AF1](POU2AF1) | 1 | (Krysiak et al. 2017) | |
|
| 120 | -| [POU2F2](POU2F2) | 1 | (Zhang et al. 2013; Krysiak et al. 2017) | |
|
| 117 | +| [PIM1](PIM1) | 1a | (Burkhardt et al. 2022; L. Pasqualucci et al. 2001) | |
|
| 118 | +| [PIM2](PIM2) | 1a | (Arthur et al. 2018) | |
|
| 119 | +| [POU2AF1](POU2AF1) | 1a | (Krysiak et al. 2017) | |
|
| 120 | +| [POU2F2](POU2F2) | 1 | (Krysiak et al. 2017; Zhang et al. 2013) | |
|
| 121 | 121 | | [PRDM1](PRDM1) | 1 | (Laura Pasqualucci et al. 2006) | |
| 122 | -| [PRKDC](PRKDC) | 1 | (Hübschmann et al. 2021; Schmitz et al. 2018) | |
|
| 122 | +| [PRKDC](PRKDC) | 1 | (Schmitz et al. 2018; Hübschmann et al. 2021) | |
|
| 123 | 123 | | [PTEN](PTEN) | 1 | (Love et al. 2012) | |
| 124 | 124 | | [PTPRD](PTPRD) | 1 | | |
| 125 | 125 | | [RB1](RB1) | 1 | (Morin et al. 2013) | |
| ... | ... | @@ -127,13 +127,13 @@ |
| 127 | 127 | | [RFXAP](RFXAP) | 1 | | |
| 128 | 128 | | [RHOA](RHOA) | 1 | (Richter et al. 2012) | |
| 129 | 129 | | [RRAGC](RRAGC) | 1 | (Okosun et al. 2016) | |
| 130 | -| [S1PR2](S1PR2) | 1 | (Morin et al. 2011; Muppidi et al. 2014) | |
|
| 130 | +| [S1PR2](S1PR2) | 1a | (Muppidi et al. 2014; Morin et al. 2011) | |
|
| 131 | 131 | | [SETD1B](SETD1B) | 1 | (Reddy et al. 2017) | |
| 132 | 132 | | [SF3B1](SF3B1) | 1 | (Love et al. 2012) | |
| 133 | -| [SGK1](SGK1) | 1 | (Morin et al. 2011) | |
|
| 133 | +| [SGK1](SGK1) | 1a | (Morin et al. 2011) | |
|
| 134 | 134 | | [SIN3A](SIN3A) | 1 | (Grande et al. 2019) | |
| 135 | -| [SMARCA4](SMARCA4) | 1 | (Richter et al. 2012; Zhang et al. 2013; Krysiak et al. 2017) | |
|
| 136 | -| [SOCS1](SOCS1) | 1 | (Morin et al. 2011) | |
|
| 135 | +| [SMARCA4](SMARCA4) | 1 | (Richter et al. 2012; Krysiak et al. 2017; Zhang et al. 2013) | |
|
| 136 | +| [SOCS1](SOCS1) | 1a | (Morin et al. 2011) | |
|
| 137 | 137 | | [SPEN](SPEN) | 1 | (Rossi et al. 2012) | |
| 138 | 138 | | [STAT3](STAT3) | 1 | (Ohgami et al. 2014) | |
| 139 | 139 | | [STAT6](STAT6) | 1 | (Yildiz et al. 2015) | |
| ... | ... | @@ -141,11 +141,11 @@ |
| 141 | 141 | | [TBL1XR1](TBL1XR1) | 1 | (Mareschal et al. 2016) | |
| 142 | 142 | | [TET2](TET2) | 1 | (Albuquerque et al. 2017; Panea et al. 2019) | |
| 143 | 143 | | [TMEM30A](TMEM30A) | 1 | (Morin et al. 2011) | |
| 144 | -| [TMSB4X](TMSB4X) | 1 | (Albuquerque et al. 2017) | |
|
| 144 | +| [TMSB4X](TMSB4X) | 1a | (Albuquerque et al. 2017) | |
|
| 145 | 145 | | [TNFAIP3](TNFAIP3) | 1 | (Compagno et al. 2009) | |
| 146 | 146 | | [TNFRSF14](TNFRSF14) | 1 | (Cheung et al. 2010) | |
| 147 | 147 | | [TOX](TOX) | 1 | (Reddy et al. 2017) | |
| 148 | -| [TP53](TP53) | 1 | (Wilda et al. 2004; Morin et al. 2011) | |
|
| 148 | +| [TP53](TP53) | 1 | (Morin et al. 2011; Wilda et al. 2004) | |
|
| 149 | 149 | | [TRIP12](TRIP12) | 1 | | |
| 150 | 150 | | [TRRAP](TRRAP) | 1 | (Parry et al. 2013) | |
| 151 | 151 | | [UBE2A](UBE2A) | 1 | (Reddy et al. 2017) | |
| ... | ... | @@ -155,7 +155,7 @@ |
| 155 | 155 | | [WEE1](WEE1) | 1 | (Schmitz et al. 2018) | |
| 156 | 156 | | [XPO1](XPO1) | 1 | (Mareschal et al. 2016) | |
| 157 | 157 | | [ZC3H12A](ZC3H12A) | 1 | (Arthur et al. 2018) | |
| 158 | -| [ZFP36L1](ZFP36L1) | 1 | (Morin et al. 2011; Panea et al. 2019) | |
|
| 158 | +| [ZFP36L1](ZFP36L1) | 1a | (Panea et al. 2019; Morin et al. 2011) | |
|
| 159 | 159 | | [ZNF292](ZNF292) | 1 | (Zhang et al. 2013) | |
| 160 | 160 | | [ZNF608](ZNF608) | 1 | (Krysiak et al. 2017; Zhang et al. 2013) | |
| 161 | 161 | |
| ... | ... | @@ -165,26 +165,26 @@ |
| 165 | 165 | |:----------------------:|:----:|:-----------------------------------------------------------:| |
| 166 | 166 | | [ABI3BP](ABI3BP) | 2 | (Morin et al. 2013) | |
| 167 | 167 | | [ADAMTS1](ADAMTS1) | 2 | (Hübschmann et al. 2021) | |
| 168 | -| [AICDA](AICDA) | 2 | (Arthur et al. 2018) | |
|
| 168 | +| [AICDA](AICDA) | 2a | (Arthur et al. 2018) | |
|
| 169 | 169 | | [ANKRD12](ANKRD12) | 2 | (Hübschmann et al. 2021) | |
| 170 | 170 | | [ANKRD17](ANKRD17) | 2 | (Reddy et al. 2017) | |
| 171 | 171 | | [ARID1B](ARID1B) | 2 | (Reddy et al. 2017) | |
| 172 | 172 | | [ARID5B](ARID5B) | 2 | (Reddy et al. 2017) | |
| 173 | 173 | | [ATR](ATR) | 2 | (Reddy et al. 2017) | |
| 174 | -| [BIRC3](BIRC3) | 2 | (Arthur et al. 2018) | |
|
| 175 | -| [BLK](BLK) | 2 | | |
|
| 174 | +| [BIRC3](BIRC3) | 2a | (Arthur et al. 2018) | |
|
| 175 | +| [BLK](BLK) | 2a | | |
|
| 176 | 176 | | [BRINP3](BRINP3) | 2 | (Reddy et al. 2017) | |
| 177 | 177 | | [BTBD3](BTBD3) | 2 | (Reddy et al. 2017) | |
| 178 | 178 | | [CADPS2](CADPS2) | 2 | (Hübschmann et al. 2021) | |
| 179 | 179 | | [CBLB](CBLB) | 2 | (Reddy et al. 2017) | |
| 180 | 180 | | [CCL4](CCL4) | 2 | (Chapuy et al. 2018) | |
| 181 | 181 | | [CD22](CD22) | 2 | (Reddy et al. 2017) | |
| 182 | -| [CD44](CD44) | 2 | (Arthur et al. 2018) | |
|
| 183 | -| [CD74](CD74) | 2 | (Arthur et al. 2018) | |
|
| 184 | -| [CDC73](CDC73) | 2 | (Reddy et al. 2017; Love et al. 2012) | |
|
| 182 | +| [CD44](CD44) | 2a | (Arthur et al. 2018) | |
|
| 183 | +| [CD74](CD74) | 2a | (Arthur et al. 2018) | |
|
| 184 | +| [CDC73](CDC73) | 2 | (Love et al. 2012; Reddy et al. 2017) | |
|
| 185 | 185 | | [CDH9](CDH9) | 2 | (Morin et al. 2013) | |
| 186 | 186 | | [CHD1](CHD1) | 2 | (Reddy et al. 2017) | |
| 187 | -| [CHD8](CHD8) | 2 | (Reddy et al. 2017; Grande et al. 2019) | |
|
| 187 | +| [CHD8](CHD8) | 2 | (Grande et al. 2019; Reddy et al. 2017) | |
|
| 188 | 188 | | [CHST2](CHST2) | 2 | (Reddy et al. 2017) | |
| 189 | 189 | | [CNOT2](CNOT2) | 2 | (Hübschmann et al. 2021) | |
| 190 | 190 | | [CNTNAP5](CNTNAP5) | 2 | (Morin et al. 2013) | |
| ... | ... | @@ -199,16 +199,16 @@ |
| 199 | 199 | | [DNMT3A](DNMT3A) | 2 | (Reddy et al. 2017) | |
| 200 | 200 | | [DOCK1](DOCK1) | 2 | (Chapuy et al. 2018) | |
| 201 | 201 | | [DSG4](DSG4) | 2 | (Morin et al. 2013) | |
| 202 | -| [EIF2AK3](EIF2AK3) | 2 | | |
|
| 203 | -| [EZR](EZR) | 2 | | |
|
| 204 | -| [FAM102A](FAM102A) | 2 | | |
|
| 202 | +| [EIF2AK3](EIF2AK3) | 2a | | |
|
| 203 | +| [EZR](EZR) | 2a | | |
|
| 204 | +| [FAM102A](FAM102A) | 2a | | |
|
| 205 | 205 | | [FAM38B](FAM38B) | 2 | (Morin et al. 2013) | |
| 206 | -| [FANK1](FANK1) | 2 | | |
|
| 206 | +| [FANK1](FANK1) | 2a | | |
|
| 207 | 207 | | [FAT4](FAT4) | 2 | (Morin et al. 2013) | |
| 208 | -| [FCRL3](FCRL3) | 2 | | |
|
| 209 | -| [FNBP1](FNBP1) | 2 | | |
|
| 208 | +| [FCRL3](FCRL3) | 2a | | |
|
| 209 | +| [FNBP1](FNBP1) | 2a | | |
|
| 210 | 210 | | [FNDC1](FNDC1) | 2 | (Morin et al. 2013) | |
| 211 | -| [FOXP1](FOXP1) | 2 | (Reddy et al. 2017) | |
|
| 211 | +| [FOXP1](FOXP1) | 2a | (Reddy et al. 2017) | |
|
| 212 | 212 | | [FUBP1](FUBP1) | 2 | (Reddy et al. 2017) | |
| 213 | 213 | | [FUT5](FUT5) | 2 | (Chapuy et al. 2018) | |
| 214 | 214 | | [GABRA2](GABRA2) | 2 | (Chapuy et al. 2018) | |
| ... | ... | @@ -218,120 +218,120 @@ |
| 218 | 218 | | [GPC5](GPC5) | 2 | (Schmitz et al. 2018) | |
| 219 | 219 | | [GSG2](GSG2) | 2 | (Schmitz et al. 2018) | |
| 220 | 220 | | [HDAC7](HDAC7) | 2 | (Morin et al. 2013) | |
| 221 | -| [HIST1H2AG](HIST1H2AG) | 2 | (Krysiak et al. 2017; Morin et al. 2013; Panea et al. 2019) | |
|
| 221 | +| [HIST1H2AG](HIST1H2AG) | 2 | (Panea et al. 2019; Krysiak et al. 2017; Morin et al. 2013) | |
|
| 222 | 222 | | [HNF1B](HNF1B) | 2 | (Laura Pasqualucci, Trifonov, et al. 2011) | |
| 223 | 223 | | [HRAS](HRAS) | 2 | (Reddy et al. 2017) | |
| 224 | 224 | | [ID3](ID3) | 2 | (Richter et al. 2012; Schmitz et al. 2012) | |
| 225 | 225 | | [IER2](IER2) | 2 | (Morin et al. 2013) | |
| 226 | 226 | | [IFNGR1](IFNGR1) | 2 | (Morin et al. 2013) | |
| 227 | -| [IGLL5](IGLL5) | 2 | (Panea et al. 2019; Russler-Germain et al. 2023) | |
|
| 227 | +| [IGLL5](IGLL5) | 2a | (Panea et al. 2019; Russler-Germain et al. 2023) | |
|
| 228 | 228 | | [IKBKB](IKBKB) | 2 | (Reddy et al. 2017) | |
| 229 | 229 | | [IKBKE](IKBKE) | 2 | (Hübschmann et al. 2021) | |
| 230 | 230 | | [IL6](IL6) | 2 | (Chapuy et al. 2018) | |
| 231 | 231 | | [INO80](INO80) | 2 | (Zhang et al. 2013) | |
| 232 | -| [IRAG2](IRAG2) | 2 | | |
|
| 233 | -| [IRF1](IRF1) | 2 | (Hübschmann et al. 2021) | |
|
| 232 | +| [IRAG2](IRAG2) | 2a | | |
|
| 233 | +| [IRF1](IRF1) | 2a | (Hübschmann et al. 2021) | |
|
| 234 | 234 | | [JAK1](JAK1) | 2 | (Zhang et al. 2013) | |
| 235 | 235 | | [JAK3](JAK3) | 2 | (Zhang et al. 2013) | |
| 236 | 236 | | [KCMF1](KCMF1) | 2 | (Reddy et al. 2017) | |
| 237 | 237 | | [KLHL21](KLHL21) | 2 | (Schmitz et al. 2018) | |
| 238 | 238 | | [LAMA5](LAMA5) | 2 | (Schmitz et al. 2018) | |
| 239 | -| [LAPTM5](LAPTM5) | 2 | (Hübschmann et al. 2021) | |
|
| 239 | +| [LAPTM5](LAPTM5) | 2a | (Hübschmann et al. 2021) | |
|
| 240 | 240 | | [LIN54](LIN54) | 2 | (Reddy et al. 2017) | |
| 241 | -| [LPP](LPP) | 2 | (Arthur et al. 2018) | |
|
| 241 | +| [LPP](LPP) | 2a | (Arthur et al. 2018) | |
|
| 242 | 242 | | [LRP12](LRP12) | 2 | (Hübschmann et al. 2021) | |
| 243 | 243 | | [LRRN3](LRRN3) | 2 | (Morin et al. 2013) | |
| 244 | 244 | | [MAGT1](MAGT1) | 2 | (Reddy et al. 2017) | |
| 245 | -| [MALAT1](MALAT1) | 2 | (Arthur et al. 2018) | |
|
| 245 | +| [MALAT1](MALAT1) | 2a | (Arthur et al. 2018) | |
|
| 246 | 246 | | [MAP2K1](MAP2K1) | 2 | (Louissaint et al. 2016; Shin et al. 2015) | |
| 247 | 247 | | [MAP4K4](MAP4K4) | 2 | (Reddy et al. 2017) | |
| 248 | 248 | | [MARK1](MARK1) | 2 | (Reddy et al. 2017) | |
| 249 | 249 | | [MECOM](MECOM) | 2 | (Reddy et al. 2017) | |
| 250 | 250 | | [MET](MET) | 2 | (Reddy et al. 2017) | |
| 251 | -| [MIR142](MIR142) | 2 | (Kwanhian et al. 2012; Grande et al. 2019) | |
|
| 252 | -| [MIR155HG](MIR155HG) | 2 | | |
|
| 251 | +| [MIR142](MIR142) | 2a | (Kwanhian et al. 2012; Grande et al. 2019) | |
|
| 252 | +| [MIR155HG](MIR155HG) | 2a | | |
|
| 253 | 253 | | [MPDZ](MPDZ) | 2 | (Morin et al. 2013) | |
| 254 | 254 | | [MSH2](MSH2) | 2 | (Reddy et al. 2017) | |
| 255 | 255 | | [MSH6](MSH6) | 2 | (Reddy et al. 2017) | |
| 256 | 256 | | [MYB](MYB) | 2 | (Reddy et al. 2017) | |
| 257 | 257 | | [MYBPC2](MYBPC2) | 2 | (Schmitz et al. 2018) | |
| 258 | -| [MYO1E](MYO1E) | 2 | | |
|
| 258 | +| [MYO1E](MYO1E) | 2a | | |
|
| 259 | 259 | | [N2RF2](N2RF2) | 2 | (Hübschmann et al. 2021) | |
| 260 | 260 | | [NANOG](NANOG) | 2 | (Chapuy et al. 2018) | |
| 261 | 261 | | [NAV1](NAV1) | 2 | (Chapuy et al. 2018) | |
| 262 | -| [NCOA3](NCOA3) | 2 | | |
|
| 262 | +| [NCOA3](NCOA3) | 2a | | |
|
| 263 | 263 | | [NCOR1](NCOR1) | 2 | (Reddy et al. 2017) | |
| 264 | -| [NEAT1](NEAT1) | 2 | (Arthur et al. 2018) | |
|
| 264 | +| [NEAT1](NEAT1) | 2a | (Arthur et al. 2018) | |
|
| 265 | 265 | | [NF1](NF1) | 2 | (Reddy et al. 2017) | |
| 266 | 266 | | [NFKB2](NFKB2) | 2 | (Reddy et al. 2017) | |
| 267 | 267 | | [NLRP5](NLRP5) | 2 | (Morin et al. 2013) | |
| 268 | 268 | | [NLRP8](NLRP8) | 2 | (Chapuy et al. 2018) | |
| 269 | 269 | | [ODZ3](ODZ3) | 2 | (Morin et al. 2013) | |
| 270 | -| [P2RX5](P2RX5) | 2 | (Morin et al. 2013) | |
|
| 270 | +| [P2RX5](P2RX5) | 2a | (Morin et al. 2013) | |
|
| 271 | 271 | | [PAPOLG](PAPOLG) | 2 | (Schmitz et al. 2018) | |
| 272 | 272 | | [PASK](PASK) | 2 | (Morin et al. 2013) | |
| 273 | -| [PAX5](PAX5) | 2 | (L. Pasqualucci et al. 2001) | |
|
| 273 | +| [PAX5](PAX5) | 2a | (L. Pasqualucci et al. 2001) | |
|
| 274 | 274 | | [PCDHB11](PCDHB11) | 2 | (Morin et al. 2013) | |
| 275 | 275 | | [PCLO](PCLO) | 2 | (Lohr et al. 2012) | |
| 276 | 276 | | [PDE4DIP](PDE4DIP) | 2 | (Chapuy et al. 2018) | |
| 277 | -| [PDS5B](PDS5B) | 2 | (Morin et al. 2013; Hübschmann et al. 2021) | |
|
| 277 | +| [PDS5B](PDS5B) | 2 | (Hübschmann et al. 2021; Morin et al. 2013) | |
|
| 278 | 278 | | [PHF6](PHF6) | 2 | (Thomas et al. 2023; Reddy et al. 2017) | |
| 279 | 279 | | [PIK3CD](PIK3CD) | 2 | (Reddy et al. 2017) | |
| 280 | -| [PIK3R1](PIK3R1) | 2 | (Panea et al. 2019; Zhang et al. 2013) | |
|
| 280 | +| [PIK3R1](PIK3R1) | 2 | (Zhang et al. 2013; Panea et al. 2019) | |
|
| 281 | 281 | | [PKD1](PKD1) | 2 | (Morin et al. 2013) | |
| 282 | 282 | | [PNPO](PNPO) | 2 | (Hübschmann et al. 2021) | |
| 283 | 283 | | [POGZ](POGZ) | 2 | (Morin et al. 2013) | |
| 284 | 284 | | [PPP1R9B](PPP1R9B) | 2 | | |
| 285 | 285 | | [PRKCB](PRKCB) | 2 | (Morin et al. 2013) | |
| 286 | 286 | | [PRPS1](PRPS1) | 2 | (Chapuy et al. 2018) | |
| 287 | -| [PTMA](PTMA) | 2 | | |
|
| 288 | -| [PTPN1](PTPN1) | 2 | | |
|
| 287 | +| [PTMA](PTMA) | 2a | | |
|
| 288 | +| [PTPN1](PTPN1) | 2a | | |
|
| 289 | 289 | | [PTPN23](PTPN23) | 2 | (Morin et al. 2013) | |
| 290 | 290 | | [PTPN6](PTPN6) | 2 | (Reddy et al. 2017) | |
| 291 | 291 | | [PTPRK](PTPRK) | 2 | (Reddy et al. 2017) | |
| 292 | 292 | | [RAC2](RAC2) | 2 | (Hübschmann et al. 2021; Panea et al. 2019) | |
| 293 | 293 | | [RAD9A](RAD9A) | 2 | (Chapuy et al. 2018) | |
| 294 | 294 | | [RARA](RARA) | 2 | (Reddy et al. 2017) | |
| 295 | -| [RCC](RCC) | 2 | | |
|
| 296 | -| [RFTN1](RFTN1) | 2 | (Arthur et al. 2018) | |
|
| 297 | -| [RHEX](RHEX) | 2 | | |
|
| 298 | -| [RHOH](RHOH) | 2 | (L. Pasqualucci et al. 2001) | |
|
| 299 | -| [RUBCNL](RUBCNL) | 2 | | |
|
| 295 | +| [RCC](RCC) | 2a | | |
|
| 296 | +| [RFTN1](RFTN1) | 2a | (Arthur et al. 2018) | |
|
| 297 | +| [RHEX](RHEX) | 2a | | |
|
| 298 | +| [RHOH](RHOH) | 2a | (L. Pasqualucci et al. 2001) | |
|
| 299 | +| [RUBCNL](RUBCNL) | 2a | | |
|
| 300 | 300 | | [RUNX1](RUNX1) | 2 | (Reddy et al. 2017) | |
| 301 | 301 | | [SAMD9L](SAMD9L) | 2 | (Morin et al. 2013) | |
| 302 | 302 | | [SARM1](SARM1) | 2 | (Morin et al. 2013) | |
| 303 | -| [SEL1L3](SEL1L3) | 2 | | |
|
| 304 | -| [SEPTIN9](SEPTIN9) | 2 | | |
|
| 305 | -| [SERPINA9](SERPINA9) | 2 | (Arthur et al. 2018) | |
|
| 303 | +| [SEL1L3](SEL1L3) | 2a | | |
|
| 304 | +| [SEPTIN9](SEPTIN9) | 2a | | |
|
| 305 | +| [SERPINA9](SERPINA9) | 2a | (Arthur et al. 2018) | |
|
| 306 | 306 | | [SETD2](SETD2) | 2 | (Zhang et al. 2013) | |
| 307 | 307 | | [SETD5](SETD5) | 2 | (Reddy et al. 2017) | |
| 308 | 308 | | [SIAH2](SIAH2) | 2 | (Hübschmann et al. 2021) | |
| 309 | 309 | | [SLC34A2](SLC34A2) | 2 | (Hübschmann et al. 2021) | |
| 310 | 310 | | [SMEK1](SMEK1) | 2 | (Chapuy et al. 2018) | |
| 311 | -| [SRRM2](SRRM2) | 2 | (Morin et al. 2013; Russler-Germain et al. 2023) | |
|
| 312 | -| [ST6GAL1](ST6GAL1) | 2 | (Arthur et al. 2018) | |
|
| 311 | +| [SRRM2](SRRM2) | 2 | (Russler-Germain et al. 2023; Morin et al. 2013) | |
|
| 312 | +| [ST6GAL1](ST6GAL1) | 2a | (Arthur et al. 2018) | |
|
| 313 | 313 | | [STAT5B](STAT5B) | 2 | (Zhang et al. 2013) | |
| 314 | 314 | | [SYK](SYK) | 2 | (Reddy et al. 2017) | |
| 315 | 315 | | [SYPL1](SYPL1) | 2 | (Morin et al. 2013) | |
| 316 | 316 | | [TAP1](TAP1) | 2 | (Schmitz et al. 2018) | |
| 317 | -| [TBC1D4](TBC1D4) | 2 | (Arthur et al. 2018) | |
|
| 318 | -| [TCL1A](TCL1A) | 2 | (Grande et al. 2019) | |
|
| 317 | +| [TBC1D4](TBC1D4) | 2a | (Arthur et al. 2018) | |
|
| 318 | +| [TCL1A](TCL1A) | 2a | (Grande et al. 2019) | |
|
| 319 | 319 | | [TGFBR2](TGFBR2) | 2 | (Reddy et al. 2017) | |
| 320 | 320 | | [TIPARP](TIPARP) | 2 | (Reddy et al. 2017) | |
| 321 | 321 | | [TLR2](TLR2) | 2 | (Chapuy et al. 2018) | |
| 322 | 322 | | [TRAF3](TRAF3) | 2 | (Laura Pasqualucci, Trifonov, et al. 2011) | |
| 323 | 323 | | [TRAF6](TRAF6) | 2 | (Hübschmann et al. 2021) | |
| 324 | -| [UBE2J1](UBE2J1) | 2 | | |
|
| 324 | +| [UBE2J1](UBE2J1) | 2a | | |
|
| 325 | 325 | | [UBR5](UBR5) | 2 | (Zhang et al. 2013) | |
| 326 | 326 | | [UNC5B](UNC5B) | 2 | (Hübschmann et al. 2021) | |
| 327 | 327 | | [UNC5D](UNC5D) | 2 | | |
| 328 | 328 | | [WAC](WAC) | 2 | (Reddy et al. 2017) | |
| 329 | 329 | | [WDFY3](WDFY3) | 2 | (Morin et al. 2013) | |
| 330 | 330 | | [WNK1](WNK1) | 2 | (Thomas et al. 2023; Hübschmann et al. 2021) | |
| 331 | -| [XBP1](XBP1) | 2 | | |
|
| 331 | +| [XBP1](XBP1) | 2a | | |
|
| 332 | 332 | | [YY1](YY1) | 2 | (Reddy et al. 2017) | |
| 333 | 333 | | [ZBTB7A](ZBTB7A) | 2 | (Reddy et al. 2017; Burkhardt et al. 2022) | |
| 334 | -| [ZCCHC7](ZCCHC7) | 2 | (Arthur et al. 2018) | |
|
| 334 | +| [ZCCHC7](ZCCHC7) | 2a | (Arthur et al. 2018) | |
|
| 335 | 335 | | [ZEB2](ZEB2) | 2 | (Zhang et al. 2013) | |
| 336 | 336 | | [ZFAT](ZFAT) | 2 | (Reddy et al. 2017) | |
| 337 | 337 | | [ZFX](ZFX) | 2 | (Reddy et al. 2017) | |
FL_genes_with_bib.md
| ... | ... | @@ -6,68 +6,68 @@ |
| 6 | 6 | |
| 7 | 7 | | Gene | Tier | Relevant references | |
| 8 | 8 | |:----------------------:|:----:|:-------------------------------------------------------------------:| |
| 9 | -| [ACTB](ACTB) | 1 | (Lohr et al. 2012) | |
|
| 10 | -| [ARID1A](ARID1A) | 1 | (Krysiak et al. 2017; Zhang et al. 2013; Love et al. 2012) | |
|
| 9 | +| [ACTB](ACTB) | 1a | (Lohr et al. 2012) | |
|
| 10 | +| [ARID1A](ARID1A) | 1 | (Love et al. 2012; Krysiak et al. 2017; Zhang et al. 2013) | |
|
| 11 | 11 | | [ATP6AP1](ATP6AP1) | 1 | (Okosun et al. 2016) | |
| 12 | 12 | | [ATP6V1B2](ATP6V1B2) | 1 | (Okosun et al. 2016) | |
| 13 | 13 | | [B2M](B2M) | 1 | (Morin et al. 2011) | |
| 14 | -| [BCL2](BCL2) | 1 | (Burkhardt et al. 2022; Morin et al. 2011; Tanaka et al. 1992) | |
|
| 15 | -| [BCL6](BCL6) | 1 | (Love et al. 2012; Morin et al. 2011) | |
|
| 16 | -| [BCL7A](BCL7A) | 1 | (Arthur et al. 2018; Krysiak et al. 2017; Grande et al. 2019) | |
|
| 14 | +| [BCL2](BCL2) | 1a | (Tanaka et al. 1992; Burkhardt et al. 2022; Morin et al. 2011) | |
|
| 15 | +| [BCL6](BCL6) | 1a | (Morin et al. 2011; Love et al. 2012) | |
|
| 16 | +| [BCL7A](BCL7A) | 1a | (Arthur et al. 2018; Krysiak et al. 2017; Grande et al. 2019) | |
|
| 17 | 17 | | [BIRC6](BIRC6) | 1 | (Reddy et al. 2017) | |
| 18 | -| [BTG1](BTG1) | 1 | (Morin et al. 2011; Burkhardt et al. 2022) | |
|
| 19 | -| [BTG2](BTG2) | 1 | (Morin et al. 2011; Love et al. 2012) | |
|
| 20 | -| [BTK](BTK) | 1 | (Albuquerque et al. 2017; Krysiak et al. 2017) | |
|
| 18 | +| [BTG1](BTG1) | 1a | (Morin et al. 2011; Burkhardt et al. 2022) | |
|
| 19 | +| [BTG2](BTG2) | 1a | (Love et al. 2012; Morin et al. 2011) | |
|
| 20 | +| [BTK](BTK) | 1 | (Krysiak et al. 2017; Albuquerque et al. 2017) | |
|
| 21 | 21 | | [CARD11](CARD11) | 1 | (Lenz et al. 2008; Morin et al. 2011; Panea et al. 2019) | |
| 22 | -| [CCND3](CCND3) | 1 | (Richter et al. 2012; Morin et al. 2011) | |
|
| 23 | -| [CD83](CD83) | 1 | (Russler-Germain et al. 2023; Panea et al. 2019; Morin et al. 2013) | |
|
| 24 | -| [CREBBP](CREBBP) | 1 | (Love et al. 2012; Laura Pasqualucci, Dominguez-Sola, et al. 2011) | |
|
| 22 | +| [CCND3](CCND3) | 1 | (Morin et al. 2011; Richter et al. 2012) | |
|
| 23 | +| [CD83](CD83) | 1a | (Russler-Germain et al. 2023; Panea et al. 2019; Morin et al. 2013) | |
|
| 24 | +| [CREBBP](CREBBP) | 1 | (Laura Pasqualucci, Dominguez-Sola, et al. 2011; Love et al. 2012) | |
|
| 25 | 25 | | [CTSS](CTSS) | 1 | (Bararia et al. 2020) | |
| 26 | -| [DTX1](DTX1) | 1 | (Panea et al. 2019; Schmitz et al. 2018) | |
|
| 27 | -| [EBF1](EBF1) | 1 | (Bohle et al. 2013; Thomas et al. 2023) | |
|
| 26 | +| [DTX1](DTX1) | 1a | (Panea et al. 2019; Schmitz et al. 2018) | |
|
| 27 | +| [EBF1](EBF1) | 1a | (Thomas et al. 2023; Bohle et al. 2013) | |
|
| 28 | 28 | | [EEF1A1](EEF1A1) | 1 | (Hübschmann et al. 2021) | |
| 29 | 29 | | [EP300](EP300) | 1 | (Laura Pasqualucci, Dominguez-Sola, et al. 2011; Panea et al. 2019) | |
| 30 | 30 | | [EZH2](EZH2) | 1 | (Morin et al. 2010; Love et al. 2012) | |
| 31 | 31 | | [FAS](FAS) | 1 | (Scholl et al. 2007) | |
| 32 | 32 | | [FOXO1](FOXO1) | 1 | (Morin et al. 2011; Schmitz et al. 2012) | |
| 33 | -| [GNA13](GNA13) | 1 | (Love et al. 2012; Morin et al. 2011) | |
|
| 33 | +| [GNA13](GNA13) | 1 | (Morin et al. 2011; Love et al. 2012) | |
|
| 34 | 34 | | [GNAI2](GNAI2) | 1 | (Morin et al. 2013; Grande et al. 2019) | |
| 35 | -| [HIST1H1B](HIST1H1B) | 1 | (Krysiak et al. 2017; Chapuy et al. 2018) | |
|
| 36 | -| [HIST1H1C](HIST1H1C) | 1 | (Morin et al. 2011; Panea et al. 2019) | |
|
| 37 | -| [HIST1H1D](HIST1H1D) | 1 | (Morin et al. 2013; Krysiak et al. 2017) | |
|
| 38 | -| [HIST1H1E](HIST1H1E) | 1 | (Morin et al. 2013; Grande et al. 2019; Krysiak et al. 2017) | |
|
| 39 | -| [HIST1H2AC](HIST1H2AC) | 1 | (Krysiak et al. 2017; Morin et al. 2013) | |
|
| 40 | -| [HIST1H2AG](HIST1H2AG) | 1 | (Krysiak et al. 2017; Panea et al. 2019; Morin et al. 2013) | |
|
| 41 | -| [HIST1H2AM](HIST1H2AM) | 1 | (Panea et al. 2019; Krysiak et al. 2017) | |
|
| 42 | -| [HIST1H2BC](HIST1H2BC) | 1 | (Krysiak et al. 2017; Reddy et al. 2017) | |
|
| 43 | -| [HIST1H2BD](HIST1H2BD) | 1 | (Krysiak et al. 2017) | |
|
| 44 | -| [HIST1H2BG](HIST1H2BG) | 1 | (Krysiak et al. 2017) | |
|
| 45 | -| [HIST1H3B](HIST1H3B) | 1 | (Zhang et al. 2013) | |
|
| 46 | -| [HIST1H3G](HIST1H3G) | 1 | (Krysiak et al. 2017) | |
|
| 35 | +| [HIST1H1B](HIST1H1B) | 1a | (Krysiak et al. 2017; Chapuy et al. 2018) | |
|
| 36 | +| [HIST1H1C](HIST1H1C) | 1a | (Morin et al. 2011; Panea et al. 2019) | |
|
| 37 | +| [HIST1H1D](HIST1H1D) | 1a | (Morin et al. 2013; Krysiak et al. 2017) | |
|
| 38 | +| [HIST1H1E](HIST1H1E) | 1a | (Grande et al. 2019; Morin et al. 2013; Krysiak et al. 2017) | |
|
| 39 | +| [HIST1H2AC](HIST1H2AC) | 1a | (Morin et al. 2013; Krysiak et al. 2017) | |
|
| 40 | +| [HIST1H2AG](HIST1H2AG) | 1a | (Panea et al. 2019; Morin et al. 2013; Krysiak et al. 2017) | |
|
| 41 | +| [HIST1H2AM](HIST1H2AM) | 1a | (Krysiak et al. 2017; Panea et al. 2019) | |
|
| 42 | +| [HIST1H2BC](HIST1H2BC) | 1a | (Reddy et al. 2017; Krysiak et al. 2017) | |
|
| 43 | +| [HIST1H2BD](HIST1H2BD) | 1a | (Krysiak et al. 2017) | |
|
| 44 | +| [HIST1H2BG](HIST1H2BG) | 1a | (Krysiak et al. 2017) | |
|
| 45 | +| [HIST1H3B](HIST1H3B) | 1a | (Zhang et al. 2013) | |
|
| 46 | +| [HIST1H3G](HIST1H3G) | 1a | (Krysiak et al. 2017) | |
|
| 47 | 47 | | [HVCN1](HVCN1) | 1 | (Krysiak et al. 2017) | |
| 48 | -| [IRF4](IRF4) | 1 | (Morin et al. 2011) | |
|
| 49 | -| [IRF8](IRF8) | 1 | (Morin et al. 2011; Panea et al. 2019) | |
|
| 48 | +| [IRF4](IRF4) | 1a | (Morin et al. 2011) | |
|
| 49 | +| [IRF8](IRF8) | 1a | (Panea et al. 2019; Morin et al. 2011) | |
|
| 50 | 50 | | [ITPKB](ITPKB) | 1 | (Schmitz et al. 2018) | |
| 51 | -| [KLF2](KLF2) | 1 | (Laura Pasqualucci, Trifonov, et al. 2011) | |
|
| 52 | -| [KLHL6](KLHL6) | 1 | (Morin et al. 2011; Panea et al. 2019) | |
|
| 53 | -| [KMT2D](KMT2D) | 1 | (Grande et al. 2019; Morin et al. 2011) | |
|
| 54 | -| [LTB](LTB) | 1 | (Panea et al. 2019; Chapuy et al. 2018) | |
|
| 51 | +| [KLF2](KLF2) | 1a | (Laura Pasqualucci, Trifonov, et al. 2011) | |
|
| 52 | +| [KLHL6](KLHL6) | 1a | (Panea et al. 2019; Morin et al. 2011) | |
|
| 53 | +| [KMT2D](KMT2D) | 1 | (Morin et al. 2011; Grande et al. 2019) | |
|
| 54 | +| [LTB](LTB) | 1a | (Panea et al. 2019; Chapuy et al. 2018) | |
|
| 55 | 55 | | [MAP2K1](MAP2K1) | 1 | (Shin et al. 2015; Louissaint et al. 2016) | |
| 56 | -| [MEF2B](MEF2B) | 1 | (Morin et al. 2011) | |
|
| 57 | -| [MEF2C](MEF2C) | 1 | (Arthur et al. 2018) | |
|
| 56 | +| [MEF2B](MEF2B) | 1a | (Morin et al. 2011) | |
|
| 57 | +| [MEF2C](MEF2C) | 1a | (Arthur et al. 2018) | |
|
| 58 | 58 | | [PCLO](PCLO) | 1 | (Lohr et al. 2012) | |
| 59 | -| [PIM1](PIM1) | 1 | (L. Pasqualucci et al. 2001; Burkhardt et al. 2022) | |
|
| 59 | +| [PIM1](PIM1) | 1a | (L. Pasqualucci et al. 2001; Burkhardt et al. 2022) | |
|
| 60 | 60 | | [POU2AF1](POU2AF1) | 1 | (Krysiak et al. 2017) | |
| 61 | 61 | | [POU2F2](POU2F2) | 1 | (Krysiak et al. 2017; Zhang et al. 2013) | |
| 62 | 62 | | [PTPRD](PTPRD) | 1 | | |
| 63 | 63 | | [RRAGC](RRAGC) | 1 | (Okosun et al. 2016) | |
| 64 | -| [S1PR2](S1PR2) | 1 | (Morin et al. 2011; Muppidi et al. 2014) | |
|
| 65 | -| [SGK1](SGK1) | 1 | (Morin et al. 2011) | |
|
| 66 | -| [SMARCA4](SMARCA4) | 1 | (Richter et al. 2012; Krysiak et al. 2017; Zhang et al. 2013) | |
|
| 67 | -| [SOCS1](SOCS1) | 1 | (Morin et al. 2011) | |
|
| 64 | +| [S1PR2](S1PR2) | 1a | (Morin et al. 2011; Muppidi et al. 2014) | |
|
| 65 | +| [SGK1](SGK1) | 1a | (Morin et al. 2011) | |
|
| 66 | +| [SMARCA4](SMARCA4) | 1 | (Zhang et al. 2013; Krysiak et al. 2017; Richter et al. 2012) | |
|
| 67 | +| [SOCS1](SOCS1) | 1a | (Morin et al. 2011) | |
|
| 68 | 68 | | [STAT6](STAT6) | 1 | (Yildiz et al. 2015) | |
| 69 | 69 | | [TBL1XR1](TBL1XR1) | 1 | (Mareschal et al. 2016) | |
| 70 | -| [TMSB4X](TMSB4X) | 1 | (Albuquerque et al. 2017) | |
|
| 70 | +| [TMSB4X](TMSB4X) | 1a | (Albuquerque et al. 2017) | |
|
| 71 | 71 | | [TNFAIP3](TNFAIP3) | 1 | (Compagno et al. 2009) | |
| 72 | 72 | | [TNFRSF14](TNFRSF14) | 1 | (Cheung et al. 2010) | |
| 73 | 73 | | [TP53](TP53) | 1 | (Wilda et al. 2004; Morin et al. 2011) | |
| ... | ... | @@ -78,55 +78,55 @@ |
| 78 | 78 | | Gene | Tier | Relevant references | |
| 79 | 79 | |:----------------------:|:----:|:------------------------------------------------------------------:| |
| 80 | 80 | | [ABL2](ABL2) | 2 | (Russler-Germain et al. 2023) | |
| 81 | -| [ACTG1](ACTG1) | 2 | (Hübschmann et al. 2021) | |
|
| 81 | +| [ACTG1](ACTG1) | 2a | (Hübschmann et al. 2021) | |
|
| 82 | 82 | | [ATP6V1A](ATP6V1A) | 2 | (Hübschmann et al. 2021) | |
| 83 | -| [BCL10](BCL10) | 2 | (Morin et al. 2011; Russler-Germain et al. 2023) | |
|
| 83 | +| [BCL10](BCL10) | 2 | (Russler-Germain et al. 2023; Morin et al. 2011) | |
|
| 84 | 84 | | [CCDC42BPB](CCDC42BPB) | 2 | (Hübschmann et al. 2021) | |
| 85 | 85 | | [CD70](CD70) | 2 | (Morin et al. 2011; Russler-Germain et al. 2023) | |
| 86 | -| [CD79B](CD79B) | 2 | (Panea et al. 2019; Morin et al. 2011) | |
|
| 86 | +| [CD79B](CD79B) | 2 | (Morin et al. 2011; Panea et al. 2019) | |
|
| 87 | 87 | | [CILP](CILP) | 2 | (Russler-Germain et al. 2023) | |
| 88 | 88 | | [CPNE8](CPNE8) | 2 | (Hübschmann et al. 2021) | |
| 89 | -| [CXCR4](CXCR4) | 2 | (Krysiak et al. 2017; Khodabakhshi et al. 2012; Panea et al. 2019) | |
|
| 89 | +| [CXCR4](CXCR4) | 2a | (Khodabakhshi et al. 2012; Panea et al. 2019; Krysiak et al. 2017) | |
|
| 90 | 90 | | [CYP2A6](CYP2A6) | 2 | (Russler-Germain et al. 2023) | |
| 91 | -| [DDX3X](DDX3X) | 2 | (Schmitz et al. 2018, 2012) | |
|
| 91 | +| [DDX3X](DDX3X) | 2 | (Schmitz et al. 2012, 2018) | |
|
| 92 | 92 | | [DHX15](DHX15) | 2 | (Hübschmann et al. 2021) | |
| 93 | -| [DUSP2](DUSP2) | 2 | (Morin et al. 2013) | |
|
| 93 | +| [DUSP2](DUSP2) | 2a | (Morin et al. 2013) | |
|
| 94 | 94 | | [EGR1](EGR1) | 2 | (Krysiak et al. 2017) | |
| 95 | 95 | | [FZR1](FZR1) | 2 | (Hübschmann et al. 2021) | |
| 96 | 96 | | [GBP7](GBP7) | 2 | (Russler-Germain et al. 2023) | |
| 97 | 97 | | [GRM6](GRM6) | 2 | (Russler-Germain et al. 2023) | |
| 98 | -| [HIST1H2BM](HIST1H2BM) | 2 | (Krysiak et al. 2017) | |
|
| 99 | -| [HIST1H3I](HIST1H3I) | 2 | (Krysiak et al. 2017; Panea et al. 2019) | |
|
| 98 | +| [HIST1H2BM](HIST1H2BM) | 2a | (Krysiak et al. 2017) | |
|
| 99 | +| [HIST1H3I](HIST1H3I) | 2a | (Krysiak et al. 2017; Panea et al. 2019) | |
|
| 100 | 100 | | [HLA-B](HLA-B) | 2 | | |
| 101 | 101 | | [HNRNPD](HNRNPD) | 2 | | |
| 102 | -| [IGLL5](IGLL5) | 2 | (Russler-Germain et al. 2023; Panea et al. 2019) | |
|
| 102 | +| [IGLL5](IGLL5) | 2a | (Panea et al. 2019; Russler-Germain et al. 2023) | |
|
| 103 | 103 | | [JUP](JUP) | 2 | (Hübschmann et al. 2021) | |
| 104 | 104 | | [KIR3DL1](KIR3DL1) | 2 | (Russler-Germain et al. 2023) | |
| 105 | 105 | | [LAPTM5](LAPTM5) | 2 | (Hübschmann et al. 2021) | |
| 106 | 106 | | [MAGEC1](MAGEC1) | 2 | (Russler-Germain et al. 2023) | |
| 107 | 107 | | [MAP7D1](MAP7D1) | 2 | (Russler-Germain et al. 2023) | |
| 108 | 108 | | [MGEA5](MGEA5) | 2 | (Hübschmann et al. 2021) | |
| 109 | -| [MKI67](MKI67) | 2 | (Schmitz et al. 2012; Russler-Germain et al. 2023) | |
|
| 110 | -| [MYC](MYC) | 2 | (Johnston and Carroll 1992; L. Pasqualucci et al. 2001) | |
|
| 109 | +| [MKI67](MKI67) | 2 | (Russler-Germain et al. 2023; Schmitz et al. 2012) | |
|
| 110 | +| [MYC](MYC) | 2a | (L. Pasqualucci et al. 2001; Johnston and Carroll 1992) | |
|
| 111 | 111 | | [MYCBP2](MYCBP2) | 2 | (Hübschmann et al. 2021) | |
| 112 | 112 | | [MYD88](MYD88) | 2 | (Ngo et al. 2011) | |
| 113 | -| [NFKBIA](NFKBIA) | 2 | (Lake et al. 2009; Russler-Germain et al. 2023) | |
|
| 113 | +| [NFKBIA](NFKBIA) | 2 | (Russler-Germain et al. 2023; Lake et al. 2009) | |
|
| 114 | 114 | | [OR8H2](OR8H2) | 2 | (Russler-Germain et al. 2023) | |
| 115 | -| [P2RY8](P2RY8) | 2 | (Lohr et al. 2012; Muppidi et al. 2014) | |
|
| 116 | -| [PDS5B](PDS5B) | 2 | (Morin et al. 2013; Hübschmann et al. 2021) | |
|
| 115 | +| [P2RY8](P2RY8) | 2 | (Muppidi et al. 2014; Lohr et al. 2012) | |
|
| 116 | +| [PDS5B](PDS5B) | 2 | (Hübschmann et al. 2021; Morin et al. 2013) | |
|
| 117 | 117 | | [PPP4C](PPP4C) | 2 | (Hübschmann et al. 2021) | |
| 118 | -| [PRKDC](PRKDC) | 2 | (Hübschmann et al. 2021; Schmitz et al. 2018) | |
|
| 118 | +| [PRKDC](PRKDC) | 2 | (Schmitz et al. 2018; Hübschmann et al. 2021) | |
|
| 119 | 119 | | [PZP](PZP) | 2 | (Russler-Germain et al. 2023) | |
| 120 | 120 | | [RBM6](RBM6) | 2 | (Hübschmann et al. 2021) | |
| 121 | 121 | | [SESN1](SESN1) | 2 | (Oricchio et al. 2017) | |
| 122 | 122 | | [SHROOM3](SHROOM3) | 2 | (Russler-Germain et al. 2023) | |
| 123 | -| [SRRM2](SRRM2) | 2 | (Russler-Germain et al. 2023; Morin et al. 2013) | |
|
| 123 | +| [SRRM2](SRRM2) | 2 | (Morin et al. 2013; Russler-Germain et al. 2023) | |
|
| 124 | 124 | | [STAB2](STAB2) | 2 | (Russler-Germain et al. 2023) | |
| 125 | 125 | | [TMEM30A](TMEM30A) | 2 | (Morin et al. 2011) | |
| 126 | 126 | | [TPP1](TPP1) | 2 | (Hübschmann et al. 2021) | |
| 127 | 127 | | [XIRP2](XIRP2) | 2 | (Russler-Germain et al. 2023) | |
| 128 | 128 | | [ZC3H12A](ZC3H12A) | 2 | (Arthur et al. 2018) | |
| 129 | -| [ZNF608](ZNF608) | 2 | (Zhang et al. 2013; Krysiak et al. 2017) | |
|
| 129 | +| [ZNF608](ZNF608) | 2 | (Krysiak et al. 2017; Zhang et al. 2013) | |
|
| 130 | 130 | |
| 131 | 131 | # References |
| 132 | 132 |