DLBCL_Tier1.md
... ...
@@ -1,5 +1,5 @@
1 1
|Gene|Status| First DLBCL study | Other lists |
2
-|:-:|:-:|:-:|:----|
2
+|:-|:-|:---|:---|
3 3
|[ACTB](ACTB)|DLBCL Tier 1|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|[FL](FL_genes#tier-1-fl-genes), [PMBL](PMBL_genes#tier-1-pmbl-genes), [MZL](MZL_genes#tier-1-mzl-genes)|
4 4
|[ACTG1](ACTG1)|DLBCL Tier 1|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|[FL](FL_genes#tier-2-fl-genes), [PMBL](PMBL_genes#tier-2-pmbl-genes), [MZL](MZL_genes#tier-2-mzl-genes)|
5 5
|[ARID1A](ARID1A)|DLBCL Tier 1|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|[BL](BL_genes#tier-1-bl-genes), [FL](FL_genes#tier-1-fl-genes), [PMBL](PMBL_genes#tier-1-pmbl-genes), [MZL](MZL_genes#tier-1-mzl-genes)|
DLBCL_Tier2.md
... ...
@@ -1,5 +1,5 @@
1 1
|Gene|Status| First DLBCL study | Other lists |
2
-|:-:|:-:|:-:|:----|
2
+|:-|:-|:---|:---|
3 3
|[ABI3BP](ABI3BP)|DLBCL Tier 2|[Morin et al](papers/morinMutationalStructuralAnalysis2013)||
4 4
|[ADAMTS1](ADAMTS1)|DLBCL Tier 2|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021)||
5 5
|[ADAMTSL3](ADAMTSL3)|DLBCL Tier 2|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)||
DLBCL_Tier3.md
... ...
@@ -1,5 +1,5 @@
1 1
|Gene|Status| First DLBCL study | Other lists |
2
-|:-:|:-:|:-:|:----|
2
+|:-|:-|:---|:---|
3 3
|[ABCA3](ABCA3)|DLBCL Tier 3|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|[MCL](MCL_genes#tier-2-mcl-genes)|
4 4
|[ABCA4](ABCA4)|DLBCL Tier 3|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)||
5 5
|[ABCB1](ABCB1)|DLBCL Tier 3|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)||
DLBCL_genes.md
... ...
@@ -3,754 +3,24 @@ title: 'DLBCL genes'
3 3
bibliography: 'morinlab.bib'
4 4
csl: 'NLM.csl'
5 5
link-citations: true
6
+nocite: |
7
+ @albuquerqueEnhancingKnowledgeDiscovery2017, @arthurGenomewideDiscoverySomatic2018, @bohleRoleEarlyBcell2013, @chapuyMolecularSubtypesDiffuse2018, @compagnoMutationsMultipleGenes2009, @davisChronicActiveBcellreceptor2010, @drevalGeneticSubdivisionsFollicular2023, @dunsCharacterizationDLBCLPMBL2021, @fanComprehensiveCharacterizationDriver2020, @hubschmannMutationalMechanismsShaping2021, @khodabakhshiRecurrentTargetsAberrant2012, @kwanhianMicroRNA142Mutated202012, @lenzOncogenicCARD11Mutations2008, @lohrDiscoveryPrioritizationSomatic2012, @mareschalWholeExomeSequencing2016, @morinFrequentMutationHistonemodifying2011, @morinGeneticLandscapesRelapsed2016, @morinMutationalStructuralAnalysis2013, @morinSomaticMutationsAltering2010, @ngoOncogenicallyActiveMYD882011, @novakWholeexomeAnalysisReveals2015, @okosunRecurrentMTORC1activatingRRAGC2016, @pararajalingamCodingNoncodingDrivers2020, @pasqualucciAnalysisCodingGenome2011, @pasqualucciHypermutationMultipleProtooncogenes2001, @pasqualucciInactivatingMutationsAcetyltransferase2011, @pasqualucciInactivationPRDM1BLIMP12006, @reddyGeneticFunctionalDrivers2017, @rushtonGeneticEvolutionaryPatterns2020, @schmitzGeneticsPathogenesisDiffuse2018, @schollMutationsRegionFAS2007, @shinBRAFV600EMAP2K12015, @tanakaFrequentIncidenceSomatic1992, @thomasMutationalAnalysisIkappaBalpha2004, @tiacciBRAFMutationsHairycell2011, @yildizActivatingSTAT6Mutations2015, @zhangGeneticHeterogeneityDiffuse2013
6 8
---
7 9
8 10
## Origins of DLBCL genes
9 11
10 12
![](DLBCL_sankey-1.svg)
11 13
12
-## Tier 1, high-confidence DLBCL genes
14
+## Tier 1 DLBCL genes
13 15
14
-### *125 total*
16
+[[include:DLBCL_Tier1.md]]
15 17
16
-|Gene|Summary| First DLBCL study | Other entities | QC result |
17
-|:-:|:--:|:-:|:-|:-|
18
-|[ACTB](ACTB)|Tier 1 GE[@lohrDiscoveryPrioritizationSomatic2012], aSHM|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|[@drevalGeneticSubdivisionsFollicular2023; @wienandGenomicAnalysesFlowsorted2019]||
19
-|[ACTG1](ACTG1)|Tier 1 GE[@fanComprehensiveCharacterizationDriver2020], aSHM|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|[@deschGenotypingCirculatingTumor2020; @hubschmannMutationalMechanismsShaping2021; @spinaGeneticsNodalMarginal2016]||
20
-|[ARID1A](ARID1A)|Tier 1 GE[@zhangGeneticHeterogeneityDiffuse2013], FE[@barisicARID1AOrchestratesSWI2024]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|[@krysiakRecurrentSomaticMutations2017; @loveGeneticLandscapeMutations2012; @rossiCodingGenomeSplenic2012; @wienandGenomicAnalysesFlowsorted2019]||
21
-|[ATM](ATM)|Tier 1 GE[@reddyGeneticFunctionalDrivers2017], FE[@camachoATMGeneInactivation2002]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)|[@beaLandscapeSomaticMutations2013; @braggioGenomicAnalysisMarginal2012]||
22
-|[B2M](B2M)|Tier 1 GE[@morinFrequentMutationHistonemodifying2011], FE[@challa-malladiCombinedGeneticInactivation2011]|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)|[@pararajalingamCodingNoncodingDrivers2020; @reichelFlowSortingExome2015]||
23
-|[BCL10](BCL10)|Tier 1 GE[@morinFrequentMutationHistonemodifying2011], FE[@xiaBCL10MutationsDefine2022]|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)|[@russler-germainMutationsAssociatedProgression2023; @spinaGeneticsNodalMarginal2016]||
24
-|[BCL2](BCL2)|Tier 1 GE[@tanakaFrequentIncidenceSomatic1992], aSHM|[Tanaka et al](papers/tanakaFrequentIncidenceSomatic1992)|[@burkhardtClinicalRelevanceMolecular2022; @morinFrequentMutationHistonemodifying2011; @sarkozyMutationalLandscapeGray2021]||
25
-|[BCL6](BCL6)|Tier 1 GE[@morinFrequentMutationHistonemodifying2011], FE[@masclePointMutationsBCL62003], aSHM|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)|[@drevalGeneticSubdivisionsFollicular2023; @loveGeneticLandscapeMutations2012]||
26
-|[BCL7A](BCL7A)|Tier 1 GE[@morinFrequentMutationHistonemodifying2011], FE[@balinas-gaviraFrequentMutationsAminoterminal2020], aSHM|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)|[@grandeGenomewideDiscoverySomatic2019; @krysiakRecurrentSomaticMutations2017; @reichelFlowSortingExome2015]||
27
-|[BIRC6](BIRC6)|Tier 1 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)|[@sarkozyMutationalLandscapeGray2021]||
28
-|[BRAF](BRAF)|Tier 1 GE[@tiacciBRAFMutationsHairycell2011], FE[@wanMechanismActivationRAFERK2004]|[Tiacci et al](papers/tiacciBRAFMutationsHairycell2011)|[@loveGeneticLandscapeMutations2012]||
29
-|[BTG1](BTG1)|Tier 1 GE[@morinFrequentMutationHistonemodifying2011], FE[@almasmoumFrequentLossBTG12021], aSHM|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)|[@burkhardtClinicalRelevanceMolecular2022; @drevalGeneticSubdivisionsFollicular2023; @sarkozyMutationalLandscapeGray2021]||
30
-|[BTG2](BTG2)|Tier 1 GE[@morinFrequentMutationHistonemodifying2011], aSHM|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)|[@drevalGeneticSubdivisionsFollicular2023; @loveGeneticLandscapeMutations2012]||
31
-|[BTK](BTK)|Tier 1 GE[@albuquerqueEnhancingKnowledgeDiscovery2017], FE[@huFollicularLymphomaassociatedBTK2021]|[Albuquerque et al](papers/albuquerqueEnhancingKnowledgeDiscovery2017)|[@krysiakRecurrentSomaticMutations2017]||
32
-|[CARD11](CARD11)|Tier 1 GE[@lenzOncogenicCARD11Mutations2008], FE[@lenzOncogenicCARD11Mutations2008]|[Lenz et al](papers/lenzOncogenicCARD11Mutations2008)|[@morinFrequentMutationHistonemodifying2011; @wuGeneticHeterogeneityPrimary2016; @yanBCRTLRSignaling2012]||
33
-|[CCND3](CCND3)|Tier 1 GE[@morinFrequentMutationHistonemodifying2011], FE[@schmitzBurkittLymphomaPathogenesis2012]|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)|[@deschGenotypingCirculatingTumor2020; @jalladesExomeSequencingIdentifies2017; @richterRecurrentMutationID32012]||
34
-|[CD58](CD58)|Tier 1 GE[@morinFrequentMutationHistonemodifying2011], FE[@challa-malladiCombinedGeneticInactivation2011]|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)|[@schneiderAlterationsCD58Gene2015]||
35
-|[CD70](CD70)|Tier 1 GE[@morinFrequentMutationHistonemodifying2011], FE[@nieDualRoleCD702022]|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)|[@russler-germainMutationsAssociatedProgression2023]||
36
-|[CD79B](CD79B)|Tier 1 GE[@davisChronicActiveBcellreceptor2010], FE[@davisChronicActiveBcellreceptor2010]|[Davis et al](papers/davisChronicActiveBcellreceptor2010)|[@drevalGeneticSubdivisionsFollicular2023; @paneaWholeGenomeLandscape2019]||
37
-|[CD83](CD83)|Tier 1 GE[@morinMutationalStructuralAnalysis2013], aSHM|[Morin et al](papers/morinMutationalStructuralAnalysis2013)|[@dunsCharacterizationDLBCLPMBL2021; @paneaWholeGenomeLandscape2019; @russler-germainMutationsAssociatedProgression2023]||
38
-|[CDKN2A](CDKN2A)|Tier 1 GE[@morinMutationalStructuralAnalysis2013], FE[@kannengiesserFunctionalStructuralGenetic2009]|[Morin et al](papers/morinMutationalStructuralAnalysis2013)|[@grandeGenomewideDiscoverySomatic2019; @spinaGeneticsNodalMarginal2016]||
39
-|[CIITA](CIITA)|Tier 1 GE[@morinFrequentMutationHistonemodifying2011], FE[@mottokGenomicAlterationsCIITA2015], aSHM|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)|[@mottokGenomicAlterationsCIITA2015]||
40
-|[CREBBP](CREBBP)|Tier 1 GE[@pasqualucciInactivatingMutationsAcetyltransferase2011], FE[@pasqualucciInactivatingMutationsAcetyltransferase2011]|[Pasqualucci et al](papers/pasqualucciInactivatingMutationsAcetyltransferase2011)|[@dunsCharacterizationDLBCLPMBL2021; @loveGeneticLandscapeMutations2012; @parryWholeExomeSequencing2013]||
41
-|[CXCR4](CXCR4)|Tier 1 GE[@khodabakhshiRecurrentTargetsAberrant2012], FE[@zmajkovicovaGenotypephenotypeCorrelationsWHIM2022], aSHM|[Khodabakhshi et al](papers/khodabakhshiRecurrentTargetsAberrant2012)|[@krysiakRecurrentSomaticMutations2017; @paneaWholeGenomeLandscape2019]||
42
-|[DDX3X](DDX3X)|Tier 1 GE[@reddyGeneticFunctionalDrivers2017], FE[@gongSequentialInverseDysregulation2021]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)|[@mottokIntegrativeGenomicAnalysis2019; @schmitzBurkittLymphomaPathogenesis2012]||
43
-|[DTX1](DTX1)|Tier 1 GE[@zhangGeneticHeterogeneityDiffuse2013], aSHM|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|[@gomezUltraDeepSequencingReveals2023; @loveGeneticLandscapeMutations2012; @rossiCodingGenomeSplenic2012]||
44
-|[DUSP2](DUSP2)|Tier 1 GE[@lohrDiscoveryPrioritizationSomatic2012], aSHM|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|[@drevalGeneticSubdivisionsFollicular2023; @dunsCharacterizationDLBCLPMBL2021]||
45
-|[EBF1](EBF1)|Tier 1 GE[@bohleRoleEarlyBcell2013], FE[@ramirez-komoSpontaneousLossLineage2017], aSHM|[Bohle et al](papers/bohleRoleEarlyBcell2013)|[@drevalGeneticSubdivisionsFollicular2023; @reichelFlowSortingExome2015; @thomasGeneticSubgroupsInform2023]||
46
-|[EEF1A1](EEF1A1)|Tier 1 GE[@chapuyMolecularSubtypesDiffuse2018]|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018)|[@hubschmannMutationalMechanismsShaping2021; @reichelFlowSortingExome2015]||
47
-|[EP300](EP300)|Tier 1 GE[@pasqualucciInactivatingMutationsAcetyltransferase2011], FE[@pasqualucciInactivatingMutationsAcetyltransferase2011]|[Pasqualucci et al](papers/pasqualucciInactivatingMutationsAcetyltransferase2011)|[@rossiCodingGenomeSplenic2012]||
48
-|[ETS1](ETS1)|Tier 1 GE[@morinFrequentMutationHistonemodifying2011], aSHM|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)|[@paneaWholeGenomeLandscape2019]||
49
-|[ETV6](ETV6)|Tier 1 GE[@lohrDiscoveryPrioritizationSomatic2012], FE[@wangETV6MutationCohort2014], aSHM|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|||
50
-|[EZH2](EZH2)|Tier 1 GE[@morinSomaticMutationsAltering2010], FE[@sneeringerCoordinatedActivitiesWildtype2010]|[Morin et al](papers/morinSomaticMutationsAltering2010)|[@loveGeneticLandscapeMutations2012; @mottokIntegrativeGenomicAnalysis2019]||
51
-|[FAS](FAS)|Tier 1 GE[@schollMutationsRegionFAS2007], FE[@wangFasFADDDeathDomain2010]|[Scholl et al](papers/schollMutationsRegionFAS2007)|[@morinFrequentMutationHistonemodifying2011; @spinaGeneticsNodalMarginal2016]||
52
-|[FBXO11](FBXO11)|Tier 1 GE[@arthurGenomewideDiscoverySomatic2018], FE[@duanFBXO11TargetsBCL62011]|[Arthur et al](papers/arthurGenomewideDiscoverySomatic2018)|[@parryWholeExomeSequencing2013; @richterRecurrentMutationID32012]||
53
-|[FBXW7](FBXW7)|Tier 1 GE[@zhangGeneticHeterogeneityDiffuse2013], FE[@saffieFBXW7TriggersDegradation2020]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
54
-|[FOXO1](FOXO1)|Tier 1 GE[@morinFrequentMutationHistonemodifying2011], FE[@trinhAnalysisFOXO1Mutations]|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)|[@dunsCharacterizationDLBCLPMBL2021; @schmitzBurkittLymphomaPathogenesis2012]||
55
-|[GNA13](GNA13)|Tier 1 GE[@morinFrequentMutationHistonemodifying2011], FE[@muppidiLossSignalingGa132014]|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)|[@loveGeneticLandscapeMutations2012; @reichelFlowSortingExome2015]||
56
-|[GNAI2](GNAI2)|Tier 1 GE[@morinMutationalStructuralAnalysis2013], FE[@muppidiLossSignalingGa132014]|[Morin et al](papers/morinMutationalStructuralAnalysis2013)|[@drevalGeneticSubdivisionsFollicular2023; @grandeGenomewideDiscoverySomatic2019]||
57
-|[GRB2](GRB2)|Tier 1 GE[@pasqualucciAnalysisCodingGenome2011]|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)|||
58
-|[GRHPR](GRHPR)|Tier 1 GE[@schmitzGeneticsPathogenesisDiffuse2018], aSHM|[Schmitz et al](papers/schmitzGeneticsPathogenesisDiffuse2018)|||
59
-|[HIST1H1B](HIST1H1B)|Tier 1 GE[@chapuyMolecularSubtypesDiffuse2018], aSHM|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018)|[@krysiakRecurrentSomaticMutations2017; @sarkozyMutationalLandscapeGray2021]||
60
-|[HIST1H1C](HIST1H1C)|Tier 1 GE[@morinFrequentMutationHistonemodifying2011], aSHM|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)|[@paneaWholeGenomeLandscape2019]||
61
-|[HIST1H1D](HIST1H1D)|Tier 1 GE[@morinMutationalStructuralAnalysis2013], aSHM|[Morin et al](papers/morinMutationalStructuralAnalysis2013)|[@jalladesExomeSequencingIdentifies2017; @krysiakRecurrentSomaticMutations2017]||
62
-|[HIST1H1E](HIST1H1E)|Tier 1 GE[@lohrDiscoveryPrioritizationSomatic2012], aSHM|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|[@grandeGenomewideDiscoverySomatic2019; @krysiakRecurrentSomaticMutations2017; @reichelFlowSortingExome2015]||
63
-|[HIST1H2AC](HIST1H2AC)|Tier 1 GE[@morinMutationalStructuralAnalysis2013], aSHM|[Morin et al](papers/morinMutationalStructuralAnalysis2013)|[@krysiakRecurrentSomaticMutations2017]||
64
-|[HIST1H2AM](HIST1H2AM)|Tier 1 GE[@chapuyMolecularSubtypesDiffuse2018], aSHM|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018)|[@krysiakRecurrentSomaticMutations2017; @paneaWholeGenomeLandscape2019]||
65
-|[HIST1H2BC](HIST1H2BC)|Tier 1 GE[@lohrDiscoveryPrioritizationSomatic2012], aSHM|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|[@krysiakRecurrentSomaticMutations2017; @mottokIntegrativeGenomicAnalysis2019]||
66
-|[HIST1H2BK](HIST1H2BK)|Tier 1 GE[@zhangGeneticHeterogeneityDiffuse2013], aSHM|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|[@paneaWholeGenomeLandscape2019; @rossiCodingGenomeSplenic2012]||
67
-|[HIST1H3B](HIST1H3B)|Tier 1 GE[@lohrDiscoveryPrioritizationSomatic2012], aSHM|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|[@reichelFlowSortingExome2015]||
68
-|[HIST2H2BE](HIST2H2BE)|Tier 1 GE[@chapuyMolecularSubtypesDiffuse2018], aSHM|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018)|||
69
-|[HLA-A](HLA-A)|Tier 1 GE[@lohrDiscoveryPrioritizationSomatic2012], FE[@fangazioGeneticMechanismsHLAI2021]|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|[@deschGenotypingCirculatingTumor2020]||
70
-|[HLA-B](HLA-B)|Tier 1 GE[@lohrDiscoveryPrioritizationSomatic2012], FE[@fangazioGeneticMechanismsHLAI2021]|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|[@wienandGenomicAnalysesFlowsorted2019]||
71
-|[HLA-C](HLA-C)|Tier 1 GE[@chapuyMolecularSubtypesDiffuse2018], FE[@fangazioGeneticMechanismsHLAI2021]|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018)|[@gomezUltraDeepSequencingReveals2023]||
72
-|[HLA-DMB](HLA-DMB)|Tier 1 GE[@hubschmannMutationalMechanismsShaping2021]|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021)|||
73
-|[HNRNPU](HNRNPU)|Tier 1 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)|[@paneaWholeGenomeLandscape2019]||
74
-|[HVCN1](HVCN1)|Tier 1 GE[@chapuyMolecularSubtypesDiffuse2018]|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018)|[@krysiakRecurrentSomaticMutations2017]||
75
-|[IKZF3](IKZF3)|Tier 1 GE[@morinFrequentMutationHistonemodifying2011], FE[@lazarianHotspotMutationTranscription2021]|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)|[@paneaWholeGenomeLandscape2019]||
76
-|[IL4R](IL4R)|Tier 1 GE[@dunsCharacterizationDLBCLPMBL2021], FE[@viganoSomaticIL4RMutations2018], aSHM|[Duns et al](papers/dunsCharacterizationDLBCLPMBL2021)|[@viganoSomaticIL4RMutations2018]||
77
-|[IRF4](IRF4)|Tier 1 GE[@morinFrequentMutationHistonemodifying2011], aSHM|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)|[@drevalGeneticSubdivisionsFollicular2023; @mottokIntegrativeGenomicAnalysis2019]||
78
-|[IRF8](IRF8)|Tier 1 GE[@morinFrequentMutationHistonemodifying2011], FE[@qiuIRF8mutantCellLymphoma2024], aSHM|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)|[@mottokIntegrativeGenomicAnalysis2019; @paneaWholeGenomeLandscape2019]||
79
-|[ITPKB](ITPKB)|Tier 1 GE[@schmitzGeneticsPathogenesisDiffuse2018], FE[@tiacciPervasiveMutationsJAKSTAT2018], aSHM|[Schmitz et al](papers/schmitzGeneticsPathogenesisDiffuse2018)|[@drevalGeneticSubdivisionsFollicular2023; @reichelFlowSortingExome2015]||
80
-|[JUNB](JUNB)|Tier 1 GE[@lohrDiscoveryPrioritizationSomatic2012]|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|[@mottokIntegrativeGenomicAnalysis2019]|PASS|
81
-|[KLF2](KLF2)|Tier 1 GE[@pasqualucciAnalysisCodingGenome2011], aSHM|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)|[@deschGenotypingCirculatingTumor2020; @drevalGeneticSubdivisionsFollicular2023; @jalladesExomeSequencingIdentifies2017]||
82
-|[KLHL14](KLHL14)|Tier 1 GE[@zhangGeneticHeterogeneityDiffuse2013], FE[@choiRegulationCellReceptordependent2020]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
83
-|[KLHL6](KLHL6)|Tier 1 GE[@morinFrequentMutationHistonemodifying2011], FE[@choiLossKLHL6Promotes2018], aSHM|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)|[@ganapathiGeneticLandscapeDural2016]||
84
-|[KMT2C](KMT2C)|Tier 1 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|[@sarkozyMutationalLandscapeGray2021; @zhangGenomicLandscapeMantle2014; @zhouSporadicEndemicBurkitt2019]||
85
-|[KMT2D](KMT2D)|Tier 1 GE[@morinFrequentMutationHistonemodifying2011], FE[@zhangDisruptionKMT2DPerturbs2015]|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)|[@beaLandscapeSomaticMutations2013; @deschGenotypingCirculatingTumor2020; @grandeGenomewideDiscoverySomatic2019; @rossiCodingGenomeSplenic2012]||
86
-|[KRAS](KRAS)|Tier 1 GE[@lohrDiscoveryPrioritizationSomatic2012], FE[@scheffzekRasRasGAPComplexStructural1997]|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|||
87
-|[LRRN3](LRRN3)|Tier 1 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|[@sarkozyMutationalLandscapeGray2021]||
88
-|[LTB](LTB)|Tier 1 GE[@chapuyMolecularSubtypesDiffuse2018], aSHM|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018)|[@deschGenotypingCirculatingTumor2020; @drevalGeneticSubdivisionsFollicular2023]||
89
-|[MEF2B](MEF2B)|Tier 1 GE[@morinFrequentMutationHistonemodifying2011], FE[@ponMEF2BMutationsNonHodgkin2015], aSHM|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)|[@beaLandscapeSomaticMutations2013]||
90
-|[MEF2C](MEF2C)|Tier 1 GE[@hubschmannMutationalMechanismsShaping2021], aSHM|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021)|||
91
-|[MGA](MGA)|Tier 1 GE[@reddyGeneticFunctionalDrivers2017], FE[@depaoliMGASuppressorMYC2013]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)|[@jalladesExomeSequencingIdentifies2017]||
92
-|[MIR142](MIR142)|Tier 1 GE[@kwanhianMicroRNA142Mutated202012], FE[@trissalMIR142LossofFunctionMutations2018], aSHM|[Kwanhian et al](papers/kwanhianMicroRNA142Mutated202012)|[@grandeGenomewideDiscoverySomatic2019]||
93
-|[MPEG1](MPEG1)|Tier 1 GE[@morinMutationalStructuralAnalysis2013]|[Morin et al](papers/morinMutationalStructuralAnalysis2013)|||
94
-|[MS4A1](MS4A1)|Tier 1 GE[@rushtonGeneticEvolutionaryPatterns2020], FE[@rushtonGeneticEvolutionaryPatterns2020], aSHM|[Rushton et al](papers/rushtonGeneticEvolutionaryPatterns2020)|[@mottokIntegrativeGenomicAnalysis2019]||
95
-|[MTOR](MTOR)|Tier 1 GE[@zhangGeneticHeterogeneityDiffuse2013], FE[@grabinerDiverseArrayCancerassociated2014]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|[@paneaWholeGenomeLandscape2019]||
96
-|[MYC](MYC)|Tier 1 GE[@pasqualucciHypermutationMultipleProtooncogenes2001], FE[@freieGermlinePointMutation2024], aSHM|[Pasqualucci et al](papers/pasqualucciHypermutationMultipleProtooncogenes2001)|[@dunsCharacterizationDLBCLPMBL2021; @jalladesExomeSequencingIdentifies2017; @johnstonCmycHypermutationBurkitt1992]||
97
-|[MYD88](MYD88)|Tier 1 GE[@ngoOncogenicallyActiveMYD882011], FE[@ngoOncogenicallyActiveMYD882011]|[Ngo et al](papers/ngoOncogenicallyActiveMYD882011)|[@drevalGeneticSubdivisionsFollicular2023; @yanBCRTLRSignaling2012]||
98
-|[NFKBIA](NFKBIA)|Tier 1 GE[@thomasMutationalAnalysisIkappaBalpha2004], FE[@jungnickelClonalDeleteriousMutations2000]|[Thomas et al](papers/thomasMutationalAnalysisIkappaBalpha2004)|[@russler-germainMutationsAssociatedProgression2023; @wienandGenomicAnalysesFlowsorted2019]||
99
-|[NFKBIE](NFKBIE)|Tier 1 GE[@morinGeneticLandscapesRelapsed2016], FE[@mansouriFunctionalLossIkBe2015]|[Morin et al](papers/morinGeneticLandscapesRelapsed2016)|[@mansouriFrequentNFKBIEDeletions2016; @pararajalingamCodingNoncodingDrivers2020]||
100
-|[NFKBIZ](NFKBIZ)|Tier 1 GE[@morinGeneticLandscapesRelapsed2016], FE[@arthurGenomewideDiscoverySomatic2018], aSHM|[Morin et al](papers/morinGeneticLandscapesRelapsed2016)|||
101
-|[NOL9](NOL9)|Tier 1 GE[@schmitzGeneticsPathogenesisDiffuse2018]|[Schmitz et al](papers/schmitzGeneticsPathogenesisDiffuse2018)|[@spinaGeneticsNodalMarginal2016]||
102
-|[NOTCH1](NOTCH1)|Tier 1 GE[@pasqualucciAnalysisCodingGenome2011], FE[@ryanCellRegulomeLinks2017]|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)|[@beaLandscapeSomaticMutations2013; @loveGeneticLandscapeMutations2012; @rossiCodingGenomeSplenic2012]||
103
-|[NOTCH2](NOTCH2)|Tier 1 GE[@zhangGeneticHeterogeneityDiffuse2013], FE[@leeGainoffunctionMutationsCopy2009]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|[@beaLandscapeSomaticMutations2013; @rossiCodingGenomeSplenic2012]||
104
-|[OSBPL10](OSBPL10)|Tier 1 GE[@zhangGeneticHeterogeneityDiffuse2013], aSHM|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
105
-|[P2RY8](P2RY8)|Tier 1 GE[@lohrDiscoveryPrioritizationSomatic2012], FE[@muppidiLossSignalingGa132014]|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|[@drevalGeneticSubdivisionsFollicular2023; @muppidiLossSignalingGa132014]||
106
-|[PIM1](PIM1)|Tier 1 GE[@pasqualucciHypermutationMultipleProtooncogenes2001], FE[@kuoRolePIM1Ibrutinibresistant2016], aSHM|[Pasqualucci et al](papers/pasqualucciHypermutationMultipleProtooncogenes2001)|[@burkhardtClinicalRelevanceMolecular2022; @drevalGeneticSubdivisionsFollicular2023; @dunsCharacterizationDLBCLPMBL2021]||
107
-|[PIM2](PIM2)|Tier 1 GE[@reddyGeneticFunctionalDrivers2017], aSHM|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)|[@reichelFlowSortingExome2015]||
108
-|[POU2AF1](POU2AF1)|Tier 1 GE[@chapuyMolecularSubtypesDiffuse2018], FE[@gonzalez-rinconUnravelingTransformationFollicular2019], aSHM|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018)|[@krysiakRecurrentSomaticMutations2017]||
109
-|[POU2F2](POU2F2)|Tier 1 GE[@lohrDiscoveryPrioritizationSomatic2012], FE[@hodsonRegulationNormalBcell2016]|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|[@krysiakRecurrentSomaticMutations2017]||
110
-|[PRDM1](PRDM1)|Tier 1 GE[@pasqualucciInactivationPRDM1BLIMP12006], FE[@pasqualucciInactivationPRDM1BLIMP12006]|[Pasqualucci et al](papers/pasqualucciInactivationPRDM1BLIMP12006)|||
111
-|[PTEN](PTEN)|Tier 1 GE[@reddyGeneticFunctionalDrivers2017], FE[@pfeiferPTENLossDefines2013]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)|[@loveGeneticLandscapeMutations2012]||
112
-|[PTPN6](PTPN6)|Tier 1 GE[@reddyGeneticFunctionalDrivers2017], FE[@demosthenousLossFunctionMutations2015]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)||PASS|
113
-|[RB1](RB1)|Tier 1 GE[@morinMutationalStructuralAnalysis2013], FE[@pinyolInactivationRB1Mantlecell2007]|[Morin et al](papers/morinMutationalStructuralAnalysis2013)|[@zhangGenomicLandscapeMantle2014]||
114
-|[RFX7](RFX7)|Tier 1 GE[@arthurGenomewideDiscoverySomatic2018], FE[@weberPiggyBacTransposonTools2019]|[Arthur et al](papers/arthurGenomewideDiscoverySomatic2018)|[@grandeGenomewideDiscoverySomatic2019]||
115
-|[RHOA](RHOA)|Tier 1 GE[@zhangGeneticHeterogeneityDiffuse2013], FE[@ohayreInactivatingMutationsGNA132016]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|[@richterRecurrentMutationID32012]||
116
-|[RRAGC](RRAGC)|Tier 1 GE[@okosunRecurrentMTORC1activatingRRAGC2016], FE[@okosunRecurrentMTORC1activatingRRAGC2016]|[Okosun et al](papers/okosunRecurrentMTORC1activatingRRAGC2016)|||
117
-|[S1PR2](S1PR2)|Tier 1 GE[@morinFrequentMutationHistonemodifying2011], FE[@muppidiLossSignalingGa132014], aSHM|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)|[@drevalGeneticSubdivisionsFollicular2023; @muppidiLossSignalingGa132014]||
118
-|[SETD1B](SETD1B)|Tier 1 GE[@albuquerqueEnhancingKnowledgeDiscovery2017], FE[@]|[Albuquerque et al](papers/albuquerqueEnhancingKnowledgeDiscovery2017)|||
119
-|[SF3B1](SF3B1)|Tier 1 GE[@reddyGeneticFunctionalDrivers2017], FE[@cazzolaBiologicClinicalSignificance2013]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)|[@loveGeneticLandscapeMutations2012]||
120
-|[SGK1](SGK1)|Tier 1 GE[@morinFrequentMutationHistonemodifying2011], FE[@gaoSGK1MutationsDLBCL2021], aSHM|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)|[@dunsCharacterizationDLBCLPMBL2021]||
121
-|[SIN3A](SIN3A)|Tier 1 GE[@chapuyMolecularSubtypesDiffuse2018]|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018)|[@grandeGenomewideDiscoverySomatic2019; @rossiCodingGenomeSplenic2012]||
122
-|[SMARCA4](SMARCA4)|Tier 1 GE[@reddyGeneticFunctionalDrivers2017], FE[@fernandoFunctionalCharacterizationSMARCA42020]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)|[@krysiakRecurrentSomaticMutations2017; @nadeuGenomicEpigenomicInsights2020; @richterRecurrentMutationID32012]||
123
-|[SOCS1](SOCS1)|Tier 1 GE[@morinFrequentMutationHistonemodifying2011], FE[@melznerBiallelicMutationSOCS12005], aSHM|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)|[@drevalGeneticSubdivisionsFollicular2023; @wenigerMutationsTumorSuppressor2006]||
124
-|[SPEN](SPEN)|Tier 1 GE[@albuquerqueEnhancingKnowledgeDiscovery2017]|[Albuquerque et al](papers/albuquerqueEnhancingKnowledgeDiscovery2017)|[@rossiCodingGenomeSplenic2012; @sarkozyMutationalLandscapeGray2021]||
125
-|[STAT3](STAT3)|Tier 1 GE[@morinFrequentMutationHistonemodifying2011], FE[@huNovelMissenseM206K2013]|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)|||
126
-|[STAT6](STAT6)|Tier 1 GE[@yildizActivatingSTAT6Mutations2015], FE[@mentzPARP14NovelTarget2022]|[Yildiz et al](papers/yildizActivatingSTAT6Mutations2015)|[@ritzRecurrentMutationsSTAT62009]||
127
-|[TAF1](TAF1)|Tier 1 GE[@morinMutationalStructuralAnalysis2013]|[Morin et al](papers/morinMutationalStructuralAnalysis2013)|[@spinaGeneticsNodalMarginal2016]||
128
-|[TBL1XR1](TBL1XR1)|Tier 1 GE[@lohrDiscoveryPrioritizationSomatic2012], FE[@venturuttiTBL1XR1MutationsDrive2020]|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|[@drevalGeneticSubdivisionsFollicular2023; @rossiCodingGenomeSplenic2012]||
129
-|[TET2](TET2)|Tier 1 GE[@albuquerqueEnhancingKnowledgeDiscovery2017], FE[@asmarGenomewideProfilingIdentifies2013]|[Albuquerque et al](papers/albuquerqueEnhancingKnowledgeDiscovery2017)|[@thomasGeneticSubgroupsInform2023]||
130
-|[TMEM30A](TMEM30A)|Tier 1 GE[@morinFrequentMutationHistonemodifying2011], FE[@ennishiTMEM30ALossoffunctionMutations2020]|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)|||
131
-|[TMSB4X](TMSB4X)|Tier 1 GE[@reddyGeneticFunctionalDrivers2017], aSHM|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)|[@drevalGeneticSubdivisionsFollicular2023]||
132
-|[TNFAIP3](TNFAIP3)|Tier 1 GE[@compagnoMutationsMultipleGenes2009], FE[@compagnoMutationsMultipleGenes2009]|[Compagno et al](papers/compagnoMutationsMultipleGenes2009)|[@drevalGeneticSubdivisionsFollicular2023; @rossiAlterationBIRC3Multiple2011; @schmitzTNFAIP3A20Tumor2009]||
133
-|[TNFRSF14](TNFRSF14)|Tier 1 GE[@morinFrequentMutationHistonemodifying2011], FE[@]|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)|[@cheungAcquiredTNFRSF14Mutations2010; @spinaGeneticsNodalMarginal2016]||
134
-|[TOX](TOX)|Tier 1 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)|||
135
-|[TP53](TP53)|Tier 1 GE[@morinFrequentMutationHistonemodifying2011], FE[@katoUnderstandingFunctionstructureFunctionmutation2003]|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)|[@beaLandscapeSomaticMutations2013; @rossiCodingGenomeSplenic2012; @tiacciPervasiveMutationsJAKSTAT2018; @wildaInactivationARFMDM2p53Pathway2004]||
136
-|[UBE2A](UBE2A)|Tier 1 GE[@lohrDiscoveryPrioritizationSomatic2012]|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|[@reichelFlowSortingExome2015]||
137
-|[WEE1](WEE1)|Tier 1 GE[@schmitzGeneticsPathogenesisDiffuse2018]|[Schmitz et al](papers/schmitzGeneticsPathogenesisDiffuse2018)|[@reichelFlowSortingExome2015]||
138
-|[XPO1](XPO1)|Tier 1 GE[@mareschalWholeExomeSequencing2016], FE[@miloudiXPO1E571KMutationModifies2020]|[Mareschal et al](papers/mareschalWholeExomeSequencing2016)|[@jardinRecurrentMutationsExportin2016]||
139
-|[ZC3H12A](ZC3H12A)|Tier 1 GE[@chapuyMolecularSubtypesDiffuse2018], FE[@skalniakRegulatoryFeedbackLoop2009]|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018)|||
140
-|[ZFP36L1](ZFP36L1)|Tier 1 GE[@morinFrequentMutationHistonemodifying2011], aSHM|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)|[@paneaWholeGenomeLandscape2019; @reichelFlowSortingExome2015]||
141
-|[ZNF292](ZNF292)|Tier 1 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)|||
142
-|[ZNF608](ZNF608)|Tier 1 GE[@morinMutationalStructuralAnalysis2013]|[Morin et al](papers/morinMutationalStructuralAnalysis2013)|[@krysiakRecurrentSomaticMutations2017]||
18
+## Tier 2 DLBCL genes
143 19
144
-## Tier 2, low-confidence DLBCL genes
20
+[[include:DLBCL_Tier2.md]]
145 21
146
-### *210 total*
22
+## Tier 3 DLBCL genes
147 23
148
-|Gene|Summary| First DLBCL study | Other entities | QC result |
149
-|:-:|:--:|:-:|:-|:-|
150
-|[ABI3BP](ABI3BP)|Tier 2 GE[@morinMutationalStructuralAnalysis2013]|[Morin et al](papers/morinMutationalStructuralAnalysis2013)||PASS|
151
-|[ADAMTS1](ADAMTS1)|Tier 2 GE[@hubschmannMutationalMechanismsShaping2021]|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021)||PASS|
152
-|[ADAMTSL3](ADAMTSL3)|Tier 2 GE[@pasqualucciAnalysisCodingGenome2011]|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)|||
153
-|[AICDA](AICDA)|Tier 2 GE[@arthurGenomewideDiscoverySomatic2018], aSHM|[Arthur et al](papers/arthurGenomewideDiscoverySomatic2018)|||
154
-|[AKAP8](AKAP8)|Tier 2 GE[@pasqualucciAnalysisCodingGenome2011]|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)|||
155
-|[ANKLE2](ANKLE2)|Tier 2 GE[@pasqualucciAnalysisCodingGenome2011]|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)|||
156
-|[ANKRD12](ANKRD12)|Tier 2 GE[@hubschmannMutationalMechanismsShaping2021]|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021)||PASS|
157
-|[ANKRD17](ANKRD17)|Tier 2 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
158
-|[ARAP2](ARAP2)|Tier 2 GE[@morinMutationalStructuralAnalysis2013]|[Morin et al](papers/morinMutationalStructuralAnalysis2013)|||
159
-|[ARID5B](ARID5B)|Tier 2 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)|[@gomezUltraDeepSequencingReveals2023]|PASS|
160
-|[ASXL3](ASXL3)|Tier 2 GE[@albuquerqueEnhancingKnowledgeDiscovery2017]|[Albuquerque et al](papers/albuquerqueEnhancingKnowledgeDiscovery2017)|||
161
-|[ATR](ATR)|Tier 2 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)||PASS|
162
-|[BCL11A](BCL11A)|Tier 2 GE[@chapuyMolecularSubtypesDiffuse2018], aSHM|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018)|||
163
-|[BCL2L10](BCL2L10)|Tier 2 GE[@pasqualucciAnalysisCodingGenome2011]|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)|||
164
-|[BCR](BCR)|Tier 2 GE[@lohrDiscoveryPrioritizationSomatic2012]|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|||
165
-|[BIRC3](BIRC3)|Tier 2 GE[@arthurGenomewideDiscoverySomatic2018], aSHM|[Arthur et al](papers/arthurGenomewideDiscoverySomatic2018)|[@beaLandscapeSomaticMutations2013; @dunsCharacterizationDLBCLPMBL2021; @rossiAlterationBIRC3Multiple2011]||
166
-|[BLK](BLK)|Tier 2 GE, aSHM||||
167
-|[BRINP3](BRINP3)|Tier 2 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)||PASS|
168
-|[BRSK1](BRSK1)|Tier 2 GE[@pasqualucciAnalysisCodingGenome2011]|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)|||
169
-|[BTBD3](BTBD3)|Tier 2 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
170
-|[C12orf35](C12orf35)|Tier 2 GE[@pasqualucciAnalysisCodingGenome2011]|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)|||
171
-|[CADPS2](CADPS2)|Tier 2 GE[@hubschmannMutationalMechanismsShaping2021]|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021)||PASS|
172
-|[CAMTA1](CAMTA1)|Tier 2 GE[@pasqualucciAnalysisCodingGenome2011]|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)|||
173
-|[CASP8](CASP8)|Tier 2 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)|||
174
-|[CD22](CD22)|Tier 2 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)||PASS|
175
-|[CD274](CD274)|Tier 2 GE[@morinFrequentMutationHistonemodifying2011]|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)|||
176
-|[CD36](CD36)|Tier 2 GE[@pasqualucciAnalysisCodingGenome2011]|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)|||
177
-|[CD44](CD44)|Tier 2 GE[@arthurGenomewideDiscoverySomatic2018], aSHM|[Arthur et al](papers/arthurGenomewideDiscoverySomatic2018)|||
178
-|[CD74](CD74)|Tier 2 GE[@arthurGenomewideDiscoverySomatic2018], aSHM|[Arthur et al](papers/arthurGenomewideDiscoverySomatic2018)|||
179
-|[CDH9](CDH9)|Tier 2 GE[@morinMutationalStructuralAnalysis2013]|[Morin et al](papers/morinMutationalStructuralAnalysis2013)||PASS|
180
-|[CEP164](CEP164)|Tier 2 GE[@albuquerqueEnhancingKnowledgeDiscovery2017]|[Albuquerque et al](papers/albuquerqueEnhancingKnowledgeDiscovery2017)|||
181
-|[CNOT2](CNOT2)|Tier 2 GE[@hubschmannMutationalMechanismsShaping2021]|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021)||PASS|
182
-|[CNTNAP5](CNTNAP5)|Tier 2 GE[@morinMutationalStructuralAnalysis2013]|[Morin et al](papers/morinMutationalStructuralAnalysis2013)||PASS|
183
-|[COQ7](COQ7)|Tier 2 GE[@chapuyMolecularSubtypesDiffuse2018]|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018)||PASS|
184
-|[CPS1](CPS1)|Tier 2 GE[@lohrDiscoveryPrioritizationSomatic2012]|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|||
185
-|[CRIP1](CRIP1)|Tier 2 GE[@chapuyMolecularSubtypesDiffuse2018]|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018)||PASS|
186
-|[CXCR5](CXCR5)|Tier 2 GE[@schmitzGeneticsPathogenesisDiffuse2018]|[Schmitz et al](papers/schmitzGeneticsPathogenesisDiffuse2018)|[@mottokIntegrativeGenomicAnalysis2019]||
187
-|[CYTSB](CYTSB)|Tier 2 GE[@pasqualucciAnalysisCodingGenome2011]|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)|||
188
-|[DAZAP1](DAZAP1)|Tier 2 GE[@pararajalingamCodingNoncodingDrivers2020]|[Pararajalingam et al](papers/pararajalingamCodingNoncodingDrivers2020)|||
189
-|[DCHS1](DCHS1)|Tier 2 GE[@pasqualucciAnalysisCodingGenome2011]|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)|||
190
-|[DDX10](DDX10)|Tier 2 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
191
-|[DHX16](DHX16)|Tier 2 GE[@hubschmannMutationalMechanismsShaping2021]|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021)||PASS|
192
-|[DNAH5](DNAH5)|Tier 2 GE[@morinMutationalStructuralAnalysis2013]|[Morin et al](papers/morinMutationalStructuralAnalysis2013)|[@jalladesExomeSequencingIdentifies2017]|PASS|
193
-|[DNM2](DNM2)|Tier 2 GE[@hubschmannMutationalMechanismsShaping2021]|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021)||PASS|
194
-|[DNMT3B](DNMT3B)|Tier 2 GE[@albuquerqueEnhancingKnowledgeDiscovery2017]|[Albuquerque et al](papers/albuquerqueEnhancingKnowledgeDiscovery2017)|||
195
-|[DOCK1](DOCK1)|Tier 2 GE[@chapuyMolecularSubtypesDiffuse2018]|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018)||PASS|
196
-|[DPYD](DPYD)|Tier 2 GE[@pasqualucciAnalysisCodingGenome2011]|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)|||
197
-|[DSC3](DSC3)|Tier 2 GE[@pasqualucciAnalysisCodingGenome2011]|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)|||
198
-|[DSEL](DSEL)|Tier 2 GE[@morinMutationalStructuralAnalysis2013]|[Morin et al](papers/morinMutationalStructuralAnalysis2013)|||
199
-|[DSG4](DSG4)|Tier 2 GE[@morinMutationalStructuralAnalysis2013]|[Morin et al](papers/morinMutationalStructuralAnalysis2013)||PASS|
200
-|[DUSP27](DUSP27)|Tier 2 GE[@pasqualucciAnalysisCodingGenome2011]|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)|||
201
-|[DUSP9](DUSP9)|Tier 2 GE[@pasqualucciAnalysisCodingGenome2011]|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)|||
202
-|[EIF2AK3](EIF2AK3)|Tier 2 GE[@schmitzGeneticsPathogenesisDiffuse2018], aSHM|[Schmitz et al](papers/schmitzGeneticsPathogenesisDiffuse2018)|||
203
-|[ERAP2](ERAP2)|Tier 2 GE[@albuquerqueEnhancingKnowledgeDiscovery2017]|[Albuquerque et al](papers/albuquerqueEnhancingKnowledgeDiscovery2017)|||
204
-|[EZR](EZR)|Tier 2 GE, aSHM||[@deschGenotypingCirculatingTumor2020]||
205
-|[FAM102A](FAM102A)|Tier 2 GE, aSHM||||
206
-|[FANK1](FANK1)|Tier 2 GE, aSHM||||
207
-|[FAT2](FAT2)|Tier 2 GE[@morinFrequentMutationHistonemodifying2011]|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)|||
208
-|[FAT4](FAT4)|Tier 2 GE[@morinMutationalStructuralAnalysis2013]|[Morin et al](papers/morinMutationalStructuralAnalysis2013)|[@parryWholeExomeSequencing2013; @zhangGenomicLandscapeMantle2014]|PASS|
209
-|[FBXO31](FBXO31)|Tier 2 GE[@pasqualucciAnalysisCodingGenome2011]|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)|||
210
-|[FCRL3](FCRL3)|Tier 2 GE, aSHM||||
211
-|[FNBP1](FNBP1)|Tier 2 GE, aSHM||||
212
-|[FOXC1](FOXC1)|Tier 2 GE[@schmitzGeneticsPathogenesisDiffuse2018]|[Schmitz et al](papers/schmitzGeneticsPathogenesisDiffuse2018)|||
213
-|[FOXP1](FOXP1)|Tier 2 GE[@reddyGeneticFunctionalDrivers2017], aSHM|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)||PASS|
214
-|[FUBP1](FUBP1)|Tier 2 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)||PASS|
215
-|[GABRA1](GABRA1)|Tier 2 GE[@lohrDiscoveryPrioritizationSomatic2012]|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|||
216
-|[GABRA2](GABRA2)|Tier 2 GE[@chapuyMolecularSubtypesDiffuse2018]|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018)|||
217
-|[GOLGA5](GOLGA5)|Tier 2 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)||PASS|
218
-|[GPC5](GPC5)|Tier 2 GE[@schmitzGeneticsPathogenesisDiffuse2018]|[Schmitz et al](papers/schmitzGeneticsPathogenesisDiffuse2018)|||
219
-|[GSG2](GSG2)|Tier 2 GE[@schmitzGeneticsPathogenesisDiffuse2018]|[Schmitz et al](papers/schmitzGeneticsPathogenesisDiffuse2018)|||
220
-|[H1FOO](H1FOO)|Tier 2 GE[@lohrDiscoveryPrioritizationSomatic2012]|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|||
221
-|[HDAC7](HDAC7)|Tier 2 GE[@morinMutationalStructuralAnalysis2013]|[Morin et al](papers/morinMutationalStructuralAnalysis2013)||PASS|
222
-|[HIST1H2AG](HIST1H2AG)|Tier 2 GE[@morinMutationalStructuralAnalysis2013]|[Morin et al](papers/morinMutationalStructuralAnalysis2013)|[@krysiakRecurrentSomaticMutations2017; @paneaWholeGenomeLandscape2019; @rossiCodingGenomeSplenic2012]|PASS|
223
-|[HIST1H2AL](HIST1H2AL)|Tier 2 GE[@lohrDiscoveryPrioritizationSomatic2012]|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|||
224
-|[HIST1H2BO](HIST1H2BO)|Tier 2 GE[@lohrDiscoveryPrioritizationSomatic2012]|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|||
225
-|[HIST1H3A](HIST1H3A)|Tier 2 GE[@lohrDiscoveryPrioritizationSomatic2012]|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|||
226
-|[HLA-DMA](HLA-DMA)|Tier 2 GE[@chapuyMolecularSubtypesDiffuse2018]|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018)|||
227
-|[HMGB1](HMGB1)|Tier 2 GE[@pasqualucciAnalysisCodingGenome2011]|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)|||
228
-|[HNF1B](HNF1B)|Tier 2 GE[@pasqualucciAnalysisCodingGenome2011]|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)|||
229
-|[HNRNPD](HNRNPD)|Tier 2 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)|||
230
-|[HNRNPH1](HNRNPH1)|Tier 2 GE[@pararajalingamCodingNoncodingDrivers2020]|[Pararajalingam et al](papers/pararajalingamCodingNoncodingDrivers2020)|||
231
-|[ID3](ID3)|Tier 2 GE[@schmitzGeneticsPathogenesisDiffuse2018]|[Schmitz et al](papers/schmitzGeneticsPathogenesisDiffuse2018)|[@richterRecurrentMutationID32012; @spinaGeneticsNodalMarginal2016]||
232
-|[IFNGR1](IFNGR1)|Tier 2 GE[@morinMutationalStructuralAnalysis2013]|[Morin et al](papers/morinMutationalStructuralAnalysis2013)||PASS|
233
-|[IGLL5](IGLL5)|Tier 2 GE[@chapuyMolecularSubtypesDiffuse2018], aSHM|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018)|[@deschGenotypingCirculatingTumor2020; @paneaWholeGenomeLandscape2019; @russler-germainMutationsAssociatedProgression2023]||
234
-|[IKBKB](IKBKB)|Tier 2 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)|[@rossiAlterationBIRC3Multiple2011; @wienandGenomicAnalysesFlowsorted2019]|PASS|
235
-|[IKBKE](IKBKE)|Tier 2 GE[@hubschmannMutationalMechanismsShaping2021]|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021)||PASS|
236
-|[IL16](IL16)|Tier 2 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)|||
237
-|[IL6](IL6)|Tier 2 GE[@chapuyMolecularSubtypesDiffuse2018]|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018)||PASS|
238
-|[INO80](INO80)|Tier 2 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)|||
239
-|[IRF1](IRF1)|Tier 2 GE[@hubschmannMutationalMechanismsShaping2021], aSHM|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021)||PASS|
240
-|[JAK1](JAK1)|Tier 2 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)|[@mottokIntegrativeGenomicAnalysis2019]||
241
-|[JAK3](JAK3)|Tier 2 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)|||
242
-|[KCMF1](KCMF1)|Tier 2 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)||PASS|
243
-|[KDM2B](KDM2B)|Tier 2 GE[@pasqualucciAnalysisCodingGenome2011]|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)|||
244
-|[KLHL21](KLHL21)|Tier 2 GE[@schmitzGeneticsPathogenesisDiffuse2018]|[Schmitz et al](papers/schmitzGeneticsPathogenesisDiffuse2018)|||
245
-|[KRTAP5-5](KRTAP5-5)|Tier 2 GE[@lohrDiscoveryPrioritizationSomatic2012]|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|||
246
-|[LAMA5](LAMA5)|Tier 2 GE[@schmitzGeneticsPathogenesisDiffuse2018]|[Schmitz et al](papers/schmitzGeneticsPathogenesisDiffuse2018)|||
247
-|[LAPTM5](LAPTM5)|Tier 2 GE[@hubschmannMutationalMechanismsShaping2021], aSHM|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021)||PASS|
248
-|[LCOR](LCOR)|Tier 2 GE[@]||||
249
-|[LPP](LPP)|Tier 2 GE[@arthurGenomewideDiscoverySomatic2018], aSHM|[Arthur et al](papers/arthurGenomewideDiscoverySomatic2018)|||
250
-|[LRP12](LRP12)|Tier 2 GE[@hubschmannMutationalMechanismsShaping2021]|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021)||PASS|
251
-|[LYN](LYN)|Tier 2 GE[@chapuyMolecularSubtypesDiffuse2018]|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018)||PASS|
252
-|[MAGEC3](MAGEC3)|Tier 2 GE[@pasqualucciAnalysisCodingGenome2011]|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)|||
253
-|[MAGT1](MAGT1)|Tier 2 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)||PASS|
254
-|[MALAT1](MALAT1)|Tier 2 GE[@arthurGenomewideDiscoverySomatic2018], aSHM|[Arthur et al](papers/arthurGenomewideDiscoverySomatic2018)|||
255
-|[MAP2K1](MAP2K1)|Tier 2 GE[@shinBRAFV600EMAP2K12015]|[Shin et al](papers/shinBRAFV600EMAP2K12015)|[@louissaintPediatrictypeNodalFollicular2016]||
256
-|[MCL1](MCL1)|Tier 2 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)|[@dunsCharacterizationDLBCLPMBL2021; @paneaWholeGenomeLandscape2019]|PASS|
257
-|[MECOM](MECOM)|Tier 2 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)||PASS|
258
-|[MED12L](MED12L)|Tier 2 GE[@pasqualucciAnalysisCodingGenome2011]|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)|||
259
-|[MET](MET)|Tier 2 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)||PASS|
260
-|[MIR155HG](MIR155HG)|Tier 2 GE, aSHM||||
261
-|[MPDZ](MPDZ)|Tier 2 GE[@morinMutationalStructuralAnalysis2013]|[Morin et al](papers/morinMutationalStructuralAnalysis2013)|[@reichelFlowSortingExome2015]|PASS|
262
-|[MSH6](MSH6)|Tier 2 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)||PASS|
263
-|[MTMR8](MTMR8)|Tier 2 GE[@pasqualucciAnalysisCodingGenome2011]|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)|||
264
-|[MYBPC2](MYBPC2)|Tier 2 GE[@schmitzGeneticsPathogenesisDiffuse2018]|[Schmitz et al](papers/schmitzGeneticsPathogenesisDiffuse2018)|||
265
-|[MYO1G](MYO1G)|Tier 2 GE[@pasqualucciAnalysisCodingGenome2011]|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)|||
266
-|[MYOM2](MYOM2)|Tier 2 GE[@pasqualucciAnalysisCodingGenome2011]|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)|||
267
-|[NAV1](NAV1)|Tier 2 GE[@chapuyMolecularSubtypesDiffuse2018]|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018)|||
268
-|[NCOA3](NCOA3)|Tier 2 GE, aSHM||||
269
-|[NEAT1](NEAT1)|Tier 2 GE[@arthurGenomewideDiscoverySomatic2018], aSHM|[Arthur et al](papers/arthurGenomewideDiscoverySomatic2018)|||
270
-|[NF1](NF1)|Tier 2 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
271
-|[NLRP5](NLRP5)|Tier 2 GE[@morinMutationalStructuralAnalysis2013]|[Morin et al](papers/morinMutationalStructuralAnalysis2013)||PASS|
272
-|[ODZ2](ODZ2)|Tier 2 GE[@morinMutationalStructuralAnalysis2013]|[Morin et al](papers/morinMutationalStructuralAnalysis2013)||PASS|
273
-|[OFD1](OFD1)|Tier 2 GE[@pasqualucciAnalysisCodingGenome2011]|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)|||
274
-|[OR6K3](OR6K3)|Tier 2 GE[@lohrDiscoveryPrioritizationSomatic2012]|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|||
275
-|[P2RX5](P2RX5)|Tier 2 GE[@morinMutationalStructuralAnalysis2013], aSHM|[Morin et al](papers/morinMutationalStructuralAnalysis2013)||PASS|
276
-|[PAPOLG](PAPOLG)|Tier 2 GE[@schmitzGeneticsPathogenesisDiffuse2018]|[Schmitz et al](papers/schmitzGeneticsPathogenesisDiffuse2018)|||
277
-|[PASD1](PASD1)|Tier 2 GE[@lohrDiscoveryPrioritizationSomatic2012]|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|||
278
-|[PASK](PASK)|Tier 2 GE[@morinMutationalStructuralAnalysis2013]|[Morin et al](papers/morinMutationalStructuralAnalysis2013)||PASS|
279
-|[PAX5](PAX5)|Tier 2 GE[@pasqualucciHypermutationMultipleProtooncogenes2001], aSHM|[Pasqualucci et al](papers/pasqualucciHypermutationMultipleProtooncogenes2001)|||
280
-|[PCDHB11](PCDHB11)|Tier 2 GE[@morinMutationalStructuralAnalysis2013]|[Morin et al](papers/morinMutationalStructuralAnalysis2013)||PASS|
281
-|[PCDHB6](PCDHB6)|Tier 2 GE[@lohrDiscoveryPrioritizationSomatic2012]|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|||
282
-|[PCLO](PCLO)|Tier 2 GE[@lohrDiscoveryPrioritizationSomatic2012]|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|||
283
-|[PDGFC](PDGFC)|Tier 2 GE[@lohrDiscoveryPrioritizationSomatic2012]|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|||
284
-|[PDS5B](PDS5B)|Tier 2 GE[@morinMutationalStructuralAnalysis2013]|[Morin et al](papers/morinMutationalStructuralAnalysis2013)|[@hubschmannMutationalMechanismsShaping2021]|PASS|
285
-|[PIK3CD](PIK3CD)|Tier 2 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
286
-|[PIK3R1](PIK3R1)|Tier 2 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|[@paneaWholeGenomeLandscape2019]||
287
-|[PMS1](PMS1)|Tier 2 GE[@pasqualucciAnalysisCodingGenome2011]|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)|||
288
-|[PNPO](PNPO)|Tier 2 GE[@hubschmannMutationalMechanismsShaping2021]|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021)||PASS|
289
-|[PPP2R5A](PPP2R5A)|Tier 2 GE[@pasqualucciAnalysisCodingGenome2011]|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)|||
290
-|[PRKCB](PRKCB)|Tier 2 GE[@morinMutationalStructuralAnalysis2013]|[Morin et al](papers/morinMutationalStructuralAnalysis2013)||PASS|
291
-|[PRKDC](PRKDC)|Tier 2 GE[@schmitzGeneticsPathogenesisDiffuse2018]|[Schmitz et al](papers/schmitzGeneticsPathogenesisDiffuse2018)|[@hubschmannMutationalMechanismsShaping2021]||
292
-|[PRPS1](PRPS1)|Tier 2 GE[@chapuyMolecularSubtypesDiffuse2018]|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018)||PASS|
293
-|[PTPN21](PTPN21)|Tier 2 GE[@lohrDiscoveryPrioritizationSomatic2012]|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|||
294
-|[PTPRD](PTPRD)|Tier 2 GE[@drevalGeneticSubdivisionsFollicular2023]|[Dreval et al](papers/drevalGeneticSubdivisionsFollicular2023)|[@spinaGeneticsNodalMarginal2016]||
295
-|[RAC2](RAC2)|Tier 2 GE[@hubschmannMutationalMechanismsShaping2021]|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021)||PASS|
296
-|[RAPGEF1](RAPGEF1)|Tier 2 GE[@morinFrequentMutationHistonemodifying2011]|[Morin et al](papers/morinFrequentMutationHistonemodifying2011)|||
297
-|[RASGEF1A](RASGEF1A)|Tier 2 GE[@pasqualucciAnalysisCodingGenome2011]|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)|||
298
-|[RBP3](RBP3)|Tier 2 GE[@lohrDiscoveryPrioritizationSomatic2012]|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|[@loveGeneticLandscapeMutations2012]||
299
-|[RCC](RCC)|Tier 2 GE, aSHM||||
300
-|[RFTN1](RFTN1)|Tier 2 GE[@arthurGenomewideDiscoverySomatic2018], aSHM|[Arthur et al](papers/arthurGenomewideDiscoverySomatic2018)|[@dunsCharacterizationDLBCLPMBL2021]||
301
-|[RFXAP](RFXAP)|Tier 2 GE||||
302
-|[RGAG1](RGAG1)|Tier 2 GE[@pasqualucciAnalysisCodingGenome2011]|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)|||
303
-|[RHEX](RHEX)|Tier 2 GE[@arthurGenomewideDiscoverySomatic2018], aSHM|[Arthur et al](papers/arthurGenomewideDiscoverySomatic2018)|||
304
-|[RHOH](RHOH)|Tier 2 GE[@pasqualucciHypermutationMultipleProtooncogenes2001], aSHM|[Pasqualucci et al](papers/pasqualucciHypermutationMultipleProtooncogenes2001)|||
305
-|[RUBCNL](RUBCNL)|Tier 2 GE, aSHM||||
306
-|[S1PR1](S1PR1)|Tier 2 GE[@lohrDiscoveryPrioritizationSomatic2012]|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|[@pararajalingamCodingNoncodingDrivers2020]||
307
-|[SAMD9L](SAMD9L)|Tier 2 GE[@morinMutationalStructuralAnalysis2013]|[Morin et al](papers/morinMutationalStructuralAnalysis2013)||PASS|
308
-|[SEL1L3](SEL1L3)|Tier 2 GE[@schmitzGeneticsPathogenesisDiffuse2018], aSHM|[Schmitz et al](papers/schmitzGeneticsPathogenesisDiffuse2018)|||
309
-|[SEPTIN9](SEPTIN9)|Tier 2 GE, aSHM||||
310
-|[SERPINA1](SERPINA1)|Tier 2 GE[@pasqualucciAnalysisCodingGenome2011]|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)|||
311
-|[SERPINA9](SERPINA9)|Tier 2 GE[@arthurGenomewideDiscoverySomatic2018], aSHM|[Arthur et al](papers/arthurGenomewideDiscoverySomatic2018)|||
312
-|[SETD2](SETD2)|Tier 2 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
313
-|[SETD5](SETD5)|Tier 2 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)|[@tiacciPervasiveMutationsJAKSTAT2018]|PASS|
314
-|[SIAH2](SIAH2)|Tier 2 GE[@hubschmannMutationalMechanismsShaping2021]|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021)|[@reichelFlowSortingExome2015]|PASS|
315
-|[SLC34A2](SLC34A2)|Tier 2 GE[@hubschmannMutationalMechanismsShaping2021]|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021)||PASS|
316
-|[SLC38A8](SLC38A8)|Tier 2 GE[@lohrDiscoveryPrioritizationSomatic2012]|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|||
317
-|[SLITRK6](SLITRK6)|Tier 2 GE[@lohrDiscoveryPrioritizationSomatic2012]|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|||
318
-|[SMARCA1](SMARCA1)|Tier 2 GE[@pasqualucciAnalysisCodingGenome2011]|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)|||
319
-|[SMEK1](SMEK1)|Tier 2 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
320
-|[SRPX](SRPX)|Tier 2 GE[@lohrDiscoveryPrioritizationSomatic2012]|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|||
321
-|[SRRM2](SRRM2)|Tier 2 GE[@morinMutationalStructuralAnalysis2013]|[Morin et al](papers/morinMutationalStructuralAnalysis2013)|[@russler-germainMutationsAssociatedProgression2023]|PASS|
322
-|[ST6GAL1](ST6GAL1)|Tier 2 GE[@arthurGenomewideDiscoverySomatic2018], aSHM|[Arthur et al](papers/arthurGenomewideDiscoverySomatic2018)|||
323
-|[STAT5B](STAT5B)|Tier 2 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)|[@tiacciPervasiveMutationsJAKSTAT2018]||
324
-|[SYN2](SYN2)|Tier 2 GE[@lohrDiscoveryPrioritizationSomatic2012]|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|||
325
-|[SYPL1](SYPL1)|Tier 2 GE[@morinMutationalStructuralAnalysis2013]|[Morin et al](papers/morinMutationalStructuralAnalysis2013)||PASS|
326
-|[TAP1](TAP1)|Tier 2 GE[@schmitzGeneticsPathogenesisDiffuse2018]|[Schmitz et al](papers/schmitzGeneticsPathogenesisDiffuse2018)|||
327
-|[TBC1D4](TBC1D4)|Tier 2 GE[@arthurGenomewideDiscoverySomatic2018], aSHM|[Arthur et al](papers/arthurGenomewideDiscoverySomatic2018)|||
328
-|[TBP](TBP)|Tier 2 GE[@lohrDiscoveryPrioritizationSomatic2012]|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|||
329
-|[TCL1A](TCL1A)|Tier 2 GE[@reddyGeneticFunctionalDrivers2017], aSHM|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)|[@grandeGenomewideDiscoverySomatic2019]||
330
-|[TGFBR2](TGFBR2)|Tier 2 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)||PASS|
331
-|[TIPARP](TIPARP)|Tier 2 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)||PASS|
332
-|[TLL2](TLL2)|Tier 2 GE[@pasqualucciAnalysisCodingGenome2011]|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)|||
333
-|[TLR2](TLR2)|Tier 2 GE[@chapuyMolecularSubtypesDiffuse2018]|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018)|[@beaLandscapeSomaticMutations2013]|PASS|
334
-|[TMSL3](TMSL3)|Tier 2 GE[@lohrDiscoveryPrioritizationSomatic2012]|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|||
335
-|[TNF](TNF)|Tier 2 GE[@lohrDiscoveryPrioritizationSomatic2012]|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|||
336
-|[TRAF3](TRAF3)|Tier 2 GE[@pasqualucciAnalysisCodingGenome2011]|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)|[@ottoGeneticLesionsTRAF32012; @rossiAlterationBIRC3Multiple2011]||
337
-|[TRAF6](TRAF6)|Tier 2 GE[@hubschmannMutationalMechanismsShaping2021]|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021)||PASS|
338
-|[TRIP12](TRIP12)|Tier 2 GE||||
339
-|[TSC22D1](TSC22D1)|Tier 2 GE[@pasqualucciAnalysisCodingGenome2011]|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)|||
340
-|[UBE2J1](UBE2J1)|Tier 2 GE[@schmitzGeneticsPathogenesisDiffuse2018], aSHM|[Schmitz et al](papers/schmitzGeneticsPathogenesisDiffuse2018)|||
341
-|[UBR5](UBR5)|Tier 2 GE[@albuquerqueEnhancingKnowledgeDiscovery2017]|[Albuquerque et al](papers/albuquerqueEnhancingKnowledgeDiscovery2017)|[@pararajalingamCodingNoncodingDrivers2020]||
342
-|[UHRF1BP1](UHRF1BP1)|Tier 2 GE[@albuquerqueEnhancingKnowledgeDiscovery2017]|[Albuquerque et al](papers/albuquerqueEnhancingKnowledgeDiscovery2017)|||
343
-|[UNC5B](UNC5B)|Tier 2 GE[@hubschmannMutationalMechanismsShaping2021]|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021)||PASS|
344
-|[UNC5C](UNC5C)|Tier 2 GE[@lohrDiscoveryPrioritizationSomatic2012]|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|||
345
-|[UNC5D](UNC5D)|Tier 2 GE[@lohrDiscoveryPrioritizationSomatic2012]|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|||
346
-|[USP7](USP7)|Tier 2 GE[@arthurGenomewideDiscoverySomatic2018]|[Arthur et al](papers/arthurGenomewideDiscoverySomatic2018)|[@grandeGenomewideDiscoverySomatic2019]||
347
-|[VAX1](VAX1)|Tier 2 GE[@lohrDiscoveryPrioritizationSomatic2012]|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|||
348
-|[WDFY3](WDFY3)|Tier 2 GE[@morinMutationalStructuralAnalysis2013]|[Morin et al](papers/morinMutationalStructuralAnalysis2013)||PASS|
349
-|[WNK1](WNK1)|Tier 2 GE[@hubschmannMutationalMechanismsShaping2021]|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021)|[@jalladesExomeSequencingIdentifies2017; @thomasGeneticSubgroupsInform2023]|PASS|
350
-|[XBP1](XBP1)|Tier 2 GE, aSHM||||
351
-|[YY1](YY1)|Tier 2 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)||PASS|
352
-|[ZCCHC7](ZCCHC7)|Tier 2 GE[@arthurGenomewideDiscoverySomatic2018], aSHM|[Arthur et al](papers/arthurGenomewideDiscoverySomatic2018)|||
353
-|[ZEB2](ZEB2)|Tier 2 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)|||
354
-|[ZFX](ZFX)|Tier 2 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)||PASS|
355
-|[ZNF217](ZNF217)|Tier 2 GE[@hubschmannMutationalMechanismsShaping2021]|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021)|[@reichelFlowSortingExome2015]|PASS|
356
-|[ZNF385B](ZNF385B)|Tier 2 GE[@lohrDiscoveryPrioritizationSomatic2012]|[Lohr et al](papers/lohrDiscoveryPrioritizationSomatic2012)|||
357
-|[ZNF423](ZNF423)|Tier 2 GE[@chapuyMolecularSubtypesDiffuse2018]|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018)||PASS|
358
-|[ZNF521](ZNF521)|Tier 2 GE[@pasqualucciAnalysisCodingGenome2011]|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)|||
359
-|[ZWILCH](ZWILCH)|Tier 2 GE[@pasqualucciAnalysisCodingGenome2011]|[Pasqualucci et al](papers/pasqualucciAnalysisCodingGenome2011)|||
24
+[[include:DLBCL_Tier3.md]]
360 25
361
-## Tier 3, retired DLBCL genes
362
-
363
-### *387 total*
364
-
365
-|Gene|Summary| First DLBCL study | Other entities | QC result |
366
-|:-:|:--:|:-:|:-|:-|
367
-|[ABCA3](ABCA3)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|[@beaLandscapeSomaticMutations2013]||
368
-|[ABCA4](ABCA4)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
369
-|[ABCB1](ABCB1)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
370
-|[ACE](ACE)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|[@loveGeneticLandscapeMutations2012]||
371
-|[ACSM3](ACSM3)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
372
-|[ACSS2](ACSS2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
373
-|[ACSS3](ACSS3)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
374
-|[ACTN1](ACTN1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
375
-|[ADAM2](ADAM2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
376
-|[ADAMTS15](ADAMTS15)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
377
-|[ADH7](ADH7)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
378
-|[AFAP1L2](AFAP1L2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
379
-|[AGA](AGA)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
380
-|[AHR](AHR)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
381
-|[AKAP9](AKAP9)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
382
-|[ALAS1](ALAS1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
383
-|[ALDH1L2](ALDH1L2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
384
-|[AMAC1](AMAC1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
385
-|[AMIGO3](AMIGO3)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
386
-|[AMPH](AMPH)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
387
-|[ANK2](ANK2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|[@zhangGenomicLandscapeMantle2014]||
388
-|[ANKRD44](ANKRD44)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
389
-|[ANTXR1](ANTXR1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
390
-|[AP1G2](AP1G2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
391
-|[APBB1](APBB1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
392
-|[APC](APC)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
393
-|[APMAP](APMAP)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
394
-|[APOA5](APOA5)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
395
-|[APP](APP)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
396
-|[ARID1B](ARID1B)|Tier 3 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)||FAIL|
397
-|[ATIC](ATIC)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
398
-|[ATP10A](ATP10A)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
399
-|[ATP1A2](ATP1A2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
400
-|[ATP2A3](ATP2A3)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
401
-|[ATP6V0A1](ATP6V0A1)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
402
-|[B4GALNT2](B4GALNT2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
403
-|[BAZ1A](BAZ1A)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
404
-|[BCAT2](BCAT2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
405
-|[BLM](BLM)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
406
-|[BMPR1A](BMPR1A)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
407
-|[BRCA1](BRCA1)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
408
-|[BRCA2](BRCA2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
409
-|[BRD4](BRD4)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|[@loveGeneticLandscapeMutations2012]||
410
-|[BSCL2](BSCL2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
411
-|[BTAF1](BTAF1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
412
-|[C9](C9)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
413
-|[CAD](CAD)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|[@loveGeneticLandscapeMutations2012]||
414
-|[CAPN5](CAPN5)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
415
-|[CAPN7](CAPN7)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
416
-|[CBLB](CBLB)|Tier 3 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)||FAIL|
417
-|[CBX3](CBX3)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
418
-|[CCDC132](CCDC132)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
419
-|[CCDC46](CCDC46)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
420
-|[CCDC97](CCDC97)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
421
-|[CCL4](CCL4)|Tier 3 GE[@chapuyMolecularSubtypesDiffuse2018]|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018)||FAIL|
422
-|[CCNF](CCNF)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|[@abateDistinctViralMutational2015]||
423
-|[CDC123](CDC123)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
424
-|[CDC73](CDC73)|Tier 3 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)|[@loveGeneticLandscapeMutations2012]|FAIL|
425
-|[CDH1](CDH1)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
426
-|[CDH10](CDH10)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
427
-|[CDH7](CDH7)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
428
-|[CDH8](CDH8)|Tier 3 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)|[@zhangGenomicLandscapeMantle2014]|FAIL|
429
-|[CDK3](CDK3)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
430
-|[CDKN1A](CDKN1A)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
431
-|[CECR1](CECR1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
432
-|[CELSR2](CELSR2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
433
-|[CGN](CGN)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
434
-|[CHD1](CHD1)|Tier 3 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)||FAIL|
435
-|[CHD3](CHD3)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
436
-|[CHEK2](CHEK2)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
437
-|[CHRM5](CHRM5)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
438
-|[CHST2](CHST2)|Tier 3 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)||FAIL|
439
-|[CIC](CIC)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
440
-|[CNGA4](CNGA4)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
441
-|[CNOT6](CNOT6)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
442
-|[CNP](CNP)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
443
-|[CNTN6](CNTN6)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
444
-|[COL5A2](COL5A2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
445
-|[CORO2A](CORO2A)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
446
-|[CORO7](CORO7)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
447
-|[CRELD2](CRELD2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
448
-|[CRTC3](CRTC3)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
449
-|[CSNK1A1](CSNK1A1)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
450
-|[CSNK2A1](CSNK2A1)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
451
-|[CST7](CST7)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
452
-|[CTNNA3](CTNNA3)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
453
-|[CYP24A1](CYP24A1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
454
-|[CYP2C18](CYP2C18)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
455
-|[CYYR1](CYYR1)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
456
-|[DCAF6](DCAF6)|Tier 3 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)||FAIL|
457
-|[DDB1](DDB1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
458
-|[DGCR8](DGCR8)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
459
-|[DHX33](DHX33)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
460
-|[DIAPH3](DIAPH3)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
461
-|[DICER1](DICER1)|Tier 3 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)||FAIL|
462
-|[DIP2B](DIP2B)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
463
-|[DLGAP1](DLGAP1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|[@loveGeneticLandscapeMutations2012]||
464
-|[DMXL1](DMXL1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
465
-|[DNMT3A](DNMT3A)|Tier 3 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)||FAIL|
466
-|[DOCK2](DOCK2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
467
-|[DOCK5](DOCK5)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
468
-|[DOLK](DOLK)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
469
-|[DSC2](DSC2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
470
-|[DSCAML1](DSCAML1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
471
-|[DSG2](DSG2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
472
-|[DSP](DSP)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
473
-|[DUOXA2](DUOXA2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
474
-|[DUPD1](DUPD1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
475
-|[DYNC1H1](DYNC1H1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
476
-|[DYNC1I1](DYNC1I1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
477
-|[ECGF1](ECGF1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
478
-|[ECT2L](ECT2L)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
479
-|[EGFR](EGFR)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
480
-|[EPHA3](EPHA3)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
481
-|[EPHA5](EPHA5)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
482
-|[EPHA7](EPHA7)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|[@mottokIntegrativeGenomicAnalysis2019]||
483
-|[ERBB3](ERBB3)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
484
-|[ERN2](ERN2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
485
-|[ETNPPL](ETNPPL)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
486
-|[EXTL3](EXTL3)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
487
-|[FAIM](FAIM)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
488
-|[FAM161A](FAM161A)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
489
-|[FAM38B](FAM38B)|Tier 3 GE[@morinMutationalStructuralAnalysis2013]|[Morin et al](papers/morinMutationalStructuralAnalysis2013)||FAIL|
490
-|[FAM62C](FAM62C)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
491
-|[FANCD2](FANCD2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
492
-|[FGD3](FGD3)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
493
-|[FGFR1](FGFR1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
494
-|[FIGN](FIGN)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
495
-|[FLNA](FLNA)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
496
-|[FLNC](FLNC)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
497
-|[FLT1](FLT1)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
498
-|[FMO2](FMO2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
499
-|[FN1](FN1)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
500
-|[FNDC1](FNDC1)|Tier 3 GE[@morinMutationalStructuralAnalysis2013]|[Morin et al](papers/morinMutationalStructuralAnalysis2013)||FAIL|
501
-|[FRMPD1](FRMPD1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
502
-|[FUT5](FUT5)|Tier 3 GE[@chapuyMolecularSubtypesDiffuse2018]|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018)||FAIL|
503
-|[FZD1](FZD1)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
504
-|[GABRG1](GABRG1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
505
-|[GAK](GAK)|Tier 3 GE[@hubschmannMutationalMechanismsShaping2021]|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021)||FAIL|
506
-|[GATA2](GATA2)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
507
-|[GATA3](GATA3)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
508
-|[GCN1L1](GCN1L1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
509
-|[GJA8](GJA8)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
510
-|[GJB4](GJB4)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
511
-|[GNAS](GNAS)|Tier 3 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)||FAIL|
512
-|[GOPC](GOPC)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
513
-|[GPD2](GPD2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
514
-|[GPR133](GPR133)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
515
-|[GPR15](GPR15)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
516
-|[GREM2](GREM2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
517
-|[GRIA2](GRIA2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
518
-|[GRM5](GRM5)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
519
-|[H6PD](H6PD)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
520
-|[HACE1](HACE1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
521
-|[HCK](HCK)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
522
-|[HFE](HFE)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
523
-|[HIPK3](HIPK3)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
524
-|[HIST1H4I](HIST1H4I)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
525
-|[HK3](HK3)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
526
-|[HLA-DQA1](HLA-DQA1)|Tier 3 GE[@hubschmannMutationalMechanismsShaping2021]|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021)||FAIL|
527
-|[HLA-DRB1](HLA-DRB1)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
528
-|[HNRNPR](HNRNPR)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
529
-|[HRAS](HRAS)|Tier 3 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)|[@jalladesExomeSequencingIdentifies2017]|FAIL|
530
-|[HSF2](HSF2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
531
-|[IDH1](IDH1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
532
-|[IER2](IER2)|Tier 3 GE[@morinMutationalStructuralAnalysis2013]|[Morin et al](papers/morinMutationalStructuralAnalysis2013)||FAIL|
533
-|[IL6ST](IL6ST)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
534
-|[INSC](INSC)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
535
-|[INTS6](INTS6)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
536
-|[IQGAP1](IQGAP1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
537
-|[IQUB](IQUB)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
538
-|[ITGA2](ITGA2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
539
-|[ITGA8](ITGA8)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
540
-|[ITGB3](ITGB3)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
541
-|[ITGB4](ITGB4)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
542
-|[ITPR1](ITPR1)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
543
-|[JAG1](JAG1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
544
-|[JAKMIP2](JAKMIP2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
545
-|[KCNA3](KCNA3)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
546
-|[KCNAB3](KCNAB3)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
547
-|[KCNJ6](KCNJ6)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
548
-|[KCNT2](KCNT2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
549
-|[KDR](KDR)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
550
-|[KIF21B](KIF21B)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
551
-|[KIT](KIT)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
552
-|[KITLG](KITLG)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
553
-|[KLB](KLB)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
554
-|[KLC3](KLC3)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
555
-|[KLF4](KLF4)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
556
-|[KLRC4](KLRC4)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
557
-|[KRT6A](KRT6A)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
558
-|[LEPR](LEPR)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
559
-|[LEPREL1](LEPREL1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
560
-|[LIFR](LIFR)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
561
-|[LILRA2](LILRA2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
562
-|[LIN54](LIN54)|Tier 3 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)||FAIL|
563
-|[LIN7C](LIN7C)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
564
-|[LPHN2](LPHN2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
565
-|[LRAP](LRAP)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
566
-|[LRIG3](LRIG3)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
567
-|[LRP1](LRP1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
568
-|[LRP10](LRP10)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
569
-|[LRP1B](LRP1B)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|[@spinaGeneticsNodalMarginal2016]||
570
-|[LRP3](LRP3)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
571
-|[LYST](LYST)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
572
-|[MAP2K3](MAP2K3)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
573
-|[MAP4K4](MAP4K4)|Tier 3 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)||FAIL|
574
-|[MARCHF7](MARCHF7)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
575
-|[MARK1](MARK1)|Tier 3 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)||FAIL|
576
-|[MBL2](MBL2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
577
-|[MCM8](MCM8)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
578
-|[MED13L](MED13L)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
579
-|[MIB1](MIB1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
580
-|[MLH1](MLH1)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
581
-|[MMEL1](MMEL1)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
582
-|[MN1](MN1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
583
-|[MORC2](MORC2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
584
-|[MPL](MPL)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
585
-|[MSH2](MSH2)|Tier 3 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)||FAIL|
586
-|[MSN](MSN)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
587
-|[MTMR3](MTMR3)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
588
-|[MYB](MYB)|Tier 3 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)|[@deschGenotypingCirculatingTumor2020]|FAIL|
589
-|[MYL7](MYL7)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
590
-|[MYO5C](MYO5C)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
591
-|[MYRIP](MYRIP)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
592
-|[NANOG](NANOG)|Tier 3 GE[@chapuyMolecularSubtypesDiffuse2018]|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018)||FAIL|
593
-|[NCOR1](NCOR1)|Tier 3 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)||FAIL|
594
-|[NDUFS1](NDUFS1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
595
-|[NELL2](NELL2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
596
-|[NFIB](NFIB)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
597
-|[NFKB2](NFKB2)|Tier 3 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)|[@mottokIntegrativeGenomicAnalysis2019]|FAIL|
598
-|[NFX1](NFX1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
599
-|[NGFR](NGFR)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
600
-|[NIPBL](NIPBL)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
601
-|[NLGN2](NLGN2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
602
-|[NLRP7](NLRP7)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
603
-|[NLRP8](NLRP8)|Tier 3 GE[@chapuyMolecularSubtypesDiffuse2018]|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018)||FAIL|
604
-|[NOTCH3](NOTCH3)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
605
-|[NPHP1](NPHP1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
606
-|[NPY2R](NPY2R)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
607
-|[NR2F2](NR2F2)|Tier 3 GE[@hubschmannMutationalMechanismsShaping2021]|[Hubschmann et al](papers/hubschmannMutationalMechanismsShaping2021)||FAIL|
608
-|[NRXN2](NRXN2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|[@loveGeneticLandscapeMutations2012]||
609
-|[NSD1](NSD1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
610
-|[NSD2](NSD2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|[@beaLandscapeSomaticMutations2013]||
611
-|[NUP153](NUP153)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
612
-|[ONECUT1](ONECUT1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
613
-|[PABPC1](PABPC1)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
614
-|[PADI1](PADI1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
615
-|[PAPPA2](PAPPA2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
616
-|[PBX1](PBX1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
617
-|[PCCB](PCCB)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
618
-|[PCDE1C](PCDE1C)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
619
-|[PCDH7](PCDH7)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
620
-|[PCDHB1](PCDHB1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
621
-|[PCDHB15](PCDHB15)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
622
-|[PCDHB3](PCDHB3)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
623
-|[PCDHB5](PCDHB5)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
624
-|[PCDHGA2](PCDHGA2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
625
-|[PDE1C](PDE1C)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
626
-|[PDE4DIP](PDE4DIP)|Tier 3 GE[@chapuyMolecularSubtypesDiffuse2018]|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018)||FAIL|
627
-|[PDGFRA](PDGFRA)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
628
-|[PDGFRB](PDGFRB)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
629
-|[PDIA2](PDIA2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
630
-|[PDZRN3](PDZRN3)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|[@paneaWholeGenomeLandscape2019]||
631
-|[PDZRN4](PDZRN4)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
632
-|[PFN1](PFN1)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
633
-|[PGR](PGR)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
634
-|[PHF6](PHF6)|Tier 3 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)|[@thomasGeneticSubgroupsInform2023]|FAIL|
635
-|[PKD1](PKD1)|Tier 3 GE[@morinMutationalStructuralAnalysis2013]|[Morin et al](papers/morinMutationalStructuralAnalysis2013)||FAIL|
636
-|[PLA2G4B](PLA2G4B)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
637
-|[PLCB4](PLCB4)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
638
-|[PLCG2](PLCG2)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|[@paneaWholeGenomeLandscape2019]||
639
-|[PLEKHA7](PLEKHA7)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
640
-|[PNLIPRP1](PNLIPRP1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
641
-|[PNPT1](PNPT1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
642
-|[POGZ](POGZ)|Tier 3 GE[@morinMutationalStructuralAnalysis2013]|[Morin et al](papers/morinMutationalStructuralAnalysis2013)||FAIL|
643
-|[POLD3](POLD3)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
644
-|[POLE](POLE)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
645
-|[POLQ](POLQ)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
646
-|[PPARGC1A](PPARGC1A)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
647
-|[PPP2R2B](PPP2R2B)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
648
-|[PPWD1](PPWD1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
649
-|[PRDM16](PRDM16)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
650
-|[PRKCB1](PRKCB1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
651
-|[PRKCQ](PRKCQ)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
652
-|[PROS1](PROS1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
653
-|[PRSS7](PRSS7)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
654
-|[PTCH1](PTCH1)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
655
-|[PTPN14](PTPN14)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
656
-|[PTPN23](PTPN23)|Tier 3 GE[@morinMutationalStructuralAnalysis2013]|[Morin et al](papers/morinMutationalStructuralAnalysis2013)||FAIL|
657
-|[PTPRF](PTPRF)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
658
-|[PTPRK](PTPRK)|Tier 3 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)||FAIL|
659
-|[PTPRT](PTPRT)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
660
-|[PXK](PXK)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
661
-|[RAB3GAP1](RAB3GAP1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
662
-|[RAD9A](RAD9A)|Tier 3 GE[@chapuyMolecularSubtypesDiffuse2018]|[Chapuy et al](papers/chapuyMolecularSubtypesDiffuse2018)||FAIL|
663
-|[RAF1](RAF1)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|[@jalladesExomeSequencingIdentifies2017]||
664
-|[RAPGEF2](RAPGEF2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
665
-|[RAPGEF3](RAPGEF3)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
666
-|[RARA](RARA)|Tier 3 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)||FAIL|
667
-|[RBM15B](RBM15B)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
668
-|[RECQL4](RECQL4)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
669
-|[RELN](RELN)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|[@sarkozyMutationalLandscapeGray2021]||
670
-|[RET](RET)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|[@loveGeneticLandscapeMutations2012]||
671
-|[RFC1](RFC1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
672
-|[RGS1](RGS1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|[@mottokIntegrativeGenomicAnalysis2019]||
673
-|[RHPN2](RHPN2)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
674
-|[RIF1](RIF1)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
675
-|[RIMS4](RIMS4)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
676
-|[ROR2](ROR2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
677
-|[RPTOR](RPTOR)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
678
-|[RSL1D1](RSL1D1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
679
-|[RUNDC1](RUNDC1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
680
-|[RUNX1](RUNX1)|Tier 3 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)||FAIL|
681
-|[RYR1](RYR1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
682
-|[SAPS3](SAPS3)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
683
-|[SARM1](SARM1)|Tier 3 GE[@morinMutationalStructuralAnalysis2013]|[Morin et al](papers/morinMutationalStructuralAnalysis2013)||FAIL|
684
-|[SCYL1](SCYL1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
685
-|[SEMA3A](SEMA3A)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
686
-|[SEMA3D](SEMA3D)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
687
-|[SEMA5A](SEMA5A)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
688
-|[SERINC2](SERINC2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
689
-|[SH3PXD2B](SH3PXD2B)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
690
-|[SHMT2](SHMT2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
691
-|[SIGLEC10](SIGLEC10)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
692
-|[SLC16A7](SLC16A7)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
693
-|[SLC16A8](SLC16A8)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
694
-|[SLC4A8](SLC4A8)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
695
-|[SLC5A1](SLC5A1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
696
-|[SLC9A5](SLC9A5)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
697
-|[SMO](SMO)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
698
-|[SOS2](SOS2)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
699
-|[SOX6](SOX6)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
700
-|[SPEG](SPEG)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
701
-|[SPTBN1](SPTBN1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
702
-|[ST8SIA3](ST8SIA3)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
703
-|[SULF2](SULF2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
704
-|[SYK](SYK)|Tier 3 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)||FAIL|
705
-|[TAF1L](TAF1L)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
706
-|[TAF4B](TAF4B)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
707
-|[TECRL](TECRL)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
708
-|[THBS4](THBS4)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
709
-|[TIMM50](TIMM50)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
710
-|[TLN1](TLN1)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
711
-|[TLN2](TLN2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
712
-|[TLR4](TLR4)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
713
-|[TMC1](TMC1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
714
-|[TMEM161A](TMEM161A)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
715
-|[TMEM16E](TMEM16E)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
716
-|[TMEM63A](TMEM63A)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
717
-|[TNPO1](TNPO1)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
718
-|[TPR](TPR)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
719
-|[TPRKB](TPRKB)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
720
-|[TRIM37](TRIM37)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
721
-|[TRIP11](TRIP11)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|[@reichelFlowSortingExome2015]||
722
-|[TRRAP](TRRAP)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|[@rossiCodingGenomeSplenic2012]||
723
-|[TSC2](TSC2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
724
-|[TSHZ2](TSHZ2)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
725
-|[TYRO3](TYRO3)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
726
-|[UBXN11](UBXN11)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
727
-|[UBXN2B](UBXN2B)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
728
-|[UHRF1BP1L](UHRF1BP1L)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
729
-|[UNC13B](UNC13B)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
730
-|[UQCRC1](UQCRC1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
731
-|[VANGL1](VANGL1)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
732
-|[VPS13A](VPS13A)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
733
-|[WAC](WAC)|Tier 3 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)|[@rossiCodingGenomeSplenic2012]|FAIL|
734
-|[WDR65](WDR65)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
735
-|[WDR66](WDR66)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
736
-|[WDR67](WDR67)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
737
-|[WIF1](WIF1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
738
-|[WNK4](WNK4)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
739
-|[WT1](WT1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
740
-|[XDH](XDH)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
741
-|[ZBTB7A](ZBTB7A)|Tier 3 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)|[@burkhardtClinicalRelevanceMolecular2022]|FAIL|
742
-|[ZFAT](ZFAT)|Tier 3 GE[@reddyGeneticFunctionalDrivers2017]|[Reddy et al](papers/reddyGeneticFunctionalDrivers2017)||FAIL|
743
-|[ZIC4](ZIC4)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
744
-|[ZMYM4](ZMYM4)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
745
-|[ZNF354A](ZNF354A)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
746
-|[ZNF366](ZNF366)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
747
-|[ZNF439](ZNF439)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
748
-|[ZNF474](ZNF474)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
749
-|[ZNF700](ZNF700)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
750
-|[ZNF790](ZNF790)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
751
-|[ZNF814](ZNF814)|Tier 3 GE[@fanComprehensiveCharacterizationDriver2020]|[Fan et al](papers/fanComprehensiveCharacterizationDriver2020)|||
752
-|[ZNF91](ZNF91)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
753
-|[ZP1](ZP1)|Tier 3 GE[@zhangGeneticHeterogeneityDiffuse2013]|[Zhang et al](papers/zhangGeneticHeterogeneityDiffuse2013)|||
754
-
755
-
756
-# References
26
+## References
... ...
\ No newline at end of file