Changes in a776134: update

				MCL_genes.md
			
          @@ -9,70 +9,63 @@ link-citations: true

           ![](MCL_sankey1-1.svg)

          -## Tier 1, high-confidence MCL genes

          +## Tier 1 MCL genes

           [[include:pages/MCL_Tier1.md]]

          -## Tier 2, low-confidence MCL genes

          +## Tier 2 MCL genes

          -### *46 total*

          +|Gene|Status| First MCL study | Other lists |

          +|:-:|:-:|:---:|:----|

          +|[ABCA3](ABCA3)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|[@zhangGeneticHeterogeneityDiffuse2013]||

          +|[ABCC9](ABCC9)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|||

          +|[ANK2](ANK2)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|[@zhangGeneticHeterogeneityDiffuse2013]||

          +|[ARID1B](ARID1B)|MCL Tier 2||

          +|[ATP11C](ATP11C)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          +|[B2M](B2M)|MCL Tier 2|[Pararajalingam et al](papers/pararajalingamCodingNoncodingDrivers2020)|[@morinFrequentMutationHistonemodifying2011; @reichelFlowSortingExome2015]||

          +|[BCOR](BCOR)|MCL Tier 2|[Nadeu et al](papers/nadeuGenomicEpigenomicInsights2020)|[@jalladesExomeSequencingIdentifies2017]||

          +|[CDH8](CDH8)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|[@reddyGeneticFunctionalDrivers2017]||

          +|[CHMP4C](CHMP4C)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|||

          +|[COL11A1](COL11A1)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          +|[COL16A1](COL16A1)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          +|[CRYBG3](CRYBG3)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|||

          +|[CTNNA2](CTNNA2)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          +|[DCP1B](DCP1B)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|||

          +|[DHDH](DHDH)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          +|[DLC1](DLC1)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          +|[DLGAP2](DLGAP2)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|||

          +|[DNAJC6](DNAJC6)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|||

          +|[EIF2AK4](EIF2AK4)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          +|[ESX1](ESX1)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          +|[FAT4](FAT4)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|[@morinMutationalStructuralAnalysis2013; @parryWholeExomeSequencing2013]||

          +|[GRIN2A](GRIN2A)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          +|[HEPH](HEPH)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          +|[KCNC2](KCNC2)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|||

          +|[KIAA1671](KIAA1671)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|||

          +|[KMT2C](KMT2C)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|[@sarkozyMutationalLandscapeGray2021; @zhangGeneticHeterogeneityDiffuse2013; @zhouSporadicEndemicBurkitt2019]||

          +|[LUZP4](LUZP4)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|||

          +|[MRGPRF](MRGPRF)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          +|[NIN](NIN)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          +|[OGDHL](OGDHL)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          +|[PCDHB2](PCDHB2)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          +|[PCSK2](PCSK2)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|||

          +|[PDLIM3](PDLIM3)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|||

          +|[PLXNB3](PLXNB3)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|[@spinaGeneticsNodalMarginal2016]||

          +|[RGS4](RGS4)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|||

          +|[ROBO2](ROBO2)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          +|[SALL3](SALL3)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|[@loveGeneticLandscapeMutations2012]||

          +|[SI](SI)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          +|[SLC17A6](SLC17A6)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|||

          +|[SMARCB1](SMARCB1)|MCL Tier 2|[Nadeu et al](papers/nadeuGenomicEpigenomicInsights2020)|||

          +|[SMC1A](SMC1A)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          +|[TBC1D26](TBC1D26)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          +|[TNRC6B](TNRC6B)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|||

          +|[TRPM6](TRPM6)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|||

          +|[ZNF117](ZNF117)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          +|[ZNF296](ZNF296)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          -|Gene|Summary| First MCL study | Other entities | QC result |

          -|:-:|:--:|:-:|:-|:-|

          -|[ABCA3](ABCA3)|Tier 2 GE[@beaLandscapeSomaticMutations2013]|[Bea et al](papers/beaLandscapeSomaticMutations2013)|[@zhangGeneticHeterogeneityDiffuse2013]||

          -|[ABCC9](ABCC9)|Tier 2 GE[@beaLandscapeSomaticMutations2013]|[Bea et al](papers/beaLandscapeSomaticMutations2013)|||

          -|[ANK2](ANK2)|Tier 2 GE[@zhangGenomicLandscapeMantle2014]|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|[@zhangGeneticHeterogeneityDiffuse2013]||

          -|[ARID1B](ARID1B)|Tier 2 GE||[@reddyGeneticFunctionalDrivers2017]||

          -|[ATP11C](ATP11C)|Tier 2 GE[@zhangGenomicLandscapeMantle2014]|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          -|[B2M](B2M)|Tier 2 GE[@pararajalingamCodingNoncodingDrivers2020], FE[@challa-malladiCombinedGeneticInactivation2011]|[Pararajalingam et al](papers/pararajalingamCodingNoncodingDrivers2020)|[@morinFrequentMutationHistonemodifying2011; @reichelFlowSortingExome2015]||

          -|[BCOR](BCOR)|Tier 2 GE[@nadeuGenomicEpigenomicInsights2020]|[Nadeu et al](papers/nadeuGenomicEpigenomicInsights2020)|[@jalladesExomeSequencingIdentifies2017]||

          -|[CDH8](CDH8)|Tier 2 GE[@zhangGenomicLandscapeMantle2014]|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|[@reddyGeneticFunctionalDrivers2017]||

          -|[CHMP4C](CHMP4C)|Tier 2 GE[@beaLandscapeSomaticMutations2013]|[Bea et al](papers/beaLandscapeSomaticMutations2013)|||

          -|[COL11A1](COL11A1)|Tier 2 GE[@zhangGenomicLandscapeMantle2014]|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          -|[COL16A1](COL16A1)|Tier 2 GE[@zhangGenomicLandscapeMantle2014]|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          -|[CRYBG3](CRYBG3)|Tier 2 GE[@beaLandscapeSomaticMutations2013]|[Bea et al](papers/beaLandscapeSomaticMutations2013)|||

          -|[CTNNA2](CTNNA2)|Tier 2 GE[@zhangGenomicLandscapeMantle2014]|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          -|[DCP1B](DCP1B)|Tier 2 GE[@beaLandscapeSomaticMutations2013]|[Bea et al](papers/beaLandscapeSomaticMutations2013)|||

          -|[DHDH](DHDH)|Tier 2 GE[@zhangGenomicLandscapeMantle2014]|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          -|[DLC1](DLC1)|Tier 2 GE[@zhangGenomicLandscapeMantle2014]|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          -|[DLGAP2](DLGAP2)|Tier 2 GE[@beaLandscapeSomaticMutations2013]|[Bea et al](papers/beaLandscapeSomaticMutations2013)|||

          -|[DNAJC6](DNAJC6)|Tier 2 GE[@beaLandscapeSomaticMutations2013]|[Bea et al](papers/beaLandscapeSomaticMutations2013)|||

          -|[EIF2AK4](EIF2AK4)|Tier 2 GE[@zhangGenomicLandscapeMantle2014]|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          -|[ESX1](ESX1)|Tier 2 GE[@zhangGenomicLandscapeMantle2014]|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          -|[FAT4](FAT4)|Tier 2 GE[@zhangGenomicLandscapeMantle2014]|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|[@morinMutationalStructuralAnalysis2013; @parryWholeExomeSequencing2013]||

          -|[GRIN2A](GRIN2A)|Tier 2 GE[@zhangGenomicLandscapeMantle2014]|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          -|[HEPH](HEPH)|Tier 2 GE[@zhangGenomicLandscapeMantle2014]|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          -|[KCNC2](KCNC2)|Tier 2 GE[@beaLandscapeSomaticMutations2013]|[Bea et al](papers/beaLandscapeSomaticMutations2013)|||

          -|[KIAA1671](KIAA1671)|Tier 2 GE[@beaLandscapeSomaticMutations2013]|[Bea et al](papers/beaLandscapeSomaticMutations2013)|||

          -|[KMT2C](KMT2C)|Tier 2 GE[@zhangGenomicLandscapeMantle2014]|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|[@sarkozyMutationalLandscapeGray2021; @zhangGeneticHeterogeneityDiffuse2013; @zhouSporadicEndemicBurkitt2019]||

          -|[LUZP4](LUZP4)|Tier 2 GE[@beaLandscapeSomaticMutations2013]|[Bea et al](papers/beaLandscapeSomaticMutations2013)|||

          -|[MRGPRF](MRGPRF)|Tier 2 GE[@zhangGenomicLandscapeMantle2014]|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          -|[NIN](NIN)|Tier 2 GE[@zhangGenomicLandscapeMantle2014]|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          -|[OGDHL](OGDHL)|Tier 2 GE[@zhangGenomicLandscapeMantle2014]|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          -|[PCDHB2](PCDHB2)|Tier 2 GE[@zhangGenomicLandscapeMantle2014]|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          -|[PCSK2](PCSK2)|Tier 2 GE[@beaLandscapeSomaticMutations2013]|[Bea et al](papers/beaLandscapeSomaticMutations2013)|||

          -|[PDLIM3](PDLIM3)|Tier 2 GE[@beaLandscapeSomaticMutations2013]|[Bea et al](papers/beaLandscapeSomaticMutations2013)|||

          -|[PLXNB3](PLXNB3)|Tier 2 GE[@zhangGenomicLandscapeMantle2014]|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|[@spinaGeneticsNodalMarginal2016]||

          -|[RGS4](RGS4)|Tier 2 GE[@beaLandscapeSomaticMutations2013]|[Bea et al](papers/beaLandscapeSomaticMutations2013)|||

          -|[ROBO2](ROBO2)|Tier 2 GE[@zhangGenomicLandscapeMantle2014]|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          -|[SALL3](SALL3)|Tier 2 GE[@zhangGenomicLandscapeMantle2014]|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|[@loveGeneticLandscapeMutations2012]||

          -|[SI](SI)|Tier 2 GE[@zhangGenomicLandscapeMantle2014]|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          -|[SLC17A6](SLC17A6)|Tier 2 GE[@beaLandscapeSomaticMutations2013]|[Bea et al](papers/beaLandscapeSomaticMutations2013)|||

          -|[SMARCB1](SMARCB1)|Tier 2 GE[@nadeuGenomicEpigenomicInsights2020]|[Nadeu et al](papers/nadeuGenomicEpigenomicInsights2020)|||

          -|[SMC1A](SMC1A)|Tier 2 GE[@zhangGenomicLandscapeMantle2014]|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          -|[TBC1D26](TBC1D26)|Tier 2 GE[@zhangGenomicLandscapeMantle2014]|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          -|[TNRC6B](TNRC6B)|Tier 2 GE[@beaLandscapeSomaticMutations2013]|[Bea et al](papers/beaLandscapeSomaticMutations2013)|||

          -|[TRPM6](TRPM6)|Tier 2 GE[@beaLandscapeSomaticMutations2013]|[Bea et al](papers/beaLandscapeSomaticMutations2013)|||

          -|[ZNF117](ZNF117)|Tier 2 GE[@zhangGenomicLandscapeMantle2014]|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          -|[ZNF296](ZNF296)|Tier 2 GE[@zhangGenomicLandscapeMantle2014]|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|||

          -## Tier 3, retired MCL genes

          -

          -### *0 total*

          -

          -|Gene|Summary| First MCL study | Other entities | QC result |

          -|:-:|:--:|:-:|:-|:-|

           # References

...	...	@@ -9,70 +9,63 @@ link-citations: true
9	9
10	10	![](MCL_sankey1-1.svg)
11	11
12		-## Tier 1, high-confidence MCL genes
	12	+## Tier 1 MCL genes
13	13
14	14	[[include:pages/MCL_Tier1.md]]
15	15
16	16
17		-## Tier 2, low-confidence MCL genes
	17	+## Tier 2 MCL genes
18	18
19		-### 46 total
	19	+\|Gene\|Status\| First MCL study \| Other lists \|
	20	+\|:-:\|:-:\|:---:\|:----\|
	21	+\|[ABCA3](ABCA3)\|MCL Tier 2\|[Bea et al](papers/beaLandscapeSomaticMutations2013)\|[@zhangGeneticHeterogeneityDiffuse2013]\|\|
	22	+\|[ABCC9](ABCC9)\|MCL Tier 2\|[Bea et al](papers/beaLandscapeSomaticMutations2013)\|\|\|
	23	+\|[ANK2](ANK2)\|MCL Tier 2\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|[@zhangGeneticHeterogeneityDiffuse2013]\|\|
	24	+\|[ARID1B](ARID1B)\|MCL Tier 2\|\|
	25	+\|[ATP11C](ATP11C)\|MCL Tier 2\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
	26	+\|[B2M](B2M)\|MCL Tier 2\|[Pararajalingam et al](papers/pararajalingamCodingNoncodingDrivers2020)\|[@morinFrequentMutationHistonemodifying2011; @reichelFlowSortingExome2015]\|\|
	27	+\|[BCOR](BCOR)\|MCL Tier 2\|[Nadeu et al](papers/nadeuGenomicEpigenomicInsights2020)\|[@jalladesExomeSequencingIdentifies2017]\|\|
	28	+\|[CDH8](CDH8)\|MCL Tier 2\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|[@reddyGeneticFunctionalDrivers2017]\|\|
	29	+\|[CHMP4C](CHMP4C)\|MCL Tier 2\|[Bea et al](papers/beaLandscapeSomaticMutations2013)\|\|\|
	30	+\|[COL11A1](COL11A1)\|MCL Tier 2\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
	31	+\|[COL16A1](COL16A1)\|MCL Tier 2\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
	32	+\|[CRYBG3](CRYBG3)\|MCL Tier 2\|[Bea et al](papers/beaLandscapeSomaticMutations2013)\|\|\|
	33	+\|[CTNNA2](CTNNA2)\|MCL Tier 2\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
	34	+\|[DCP1B](DCP1B)\|MCL Tier 2\|[Bea et al](papers/beaLandscapeSomaticMutations2013)\|\|\|
	35	+\|[DHDH](DHDH)\|MCL Tier 2\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
	36	+\|[DLC1](DLC1)\|MCL Tier 2\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
	37	+\|[DLGAP2](DLGAP2)\|MCL Tier 2\|[Bea et al](papers/beaLandscapeSomaticMutations2013)\|\|\|
	38	+\|[DNAJC6](DNAJC6)\|MCL Tier 2\|[Bea et al](papers/beaLandscapeSomaticMutations2013)\|\|\|
	39	+\|[EIF2AK4](EIF2AK4)\|MCL Tier 2\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
	40	+\|[ESX1](ESX1)\|MCL Tier 2\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
	41	+\|[FAT4](FAT4)\|MCL Tier 2\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|[@morinMutationalStructuralAnalysis2013; @parryWholeExomeSequencing2013]\|\|
	42	+\|[GRIN2A](GRIN2A)\|MCL Tier 2\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
	43	+\|[HEPH](HEPH)\|MCL Tier 2\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
	44	+\|[KCNC2](KCNC2)\|MCL Tier 2\|[Bea et al](papers/beaLandscapeSomaticMutations2013)\|\|\|
	45	+\|[KIAA1671](KIAA1671)\|MCL Tier 2\|[Bea et al](papers/beaLandscapeSomaticMutations2013)\|\|\|
	46	+\|[KMT2C](KMT2C)\|MCL Tier 2\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|[@sarkozyMutationalLandscapeGray2021; @zhangGeneticHeterogeneityDiffuse2013; @zhouSporadicEndemicBurkitt2019]\|\|
	47	+\|[LUZP4](LUZP4)\|MCL Tier 2\|[Bea et al](papers/beaLandscapeSomaticMutations2013)\|\|\|
	48	+\|[MRGPRF](MRGPRF)\|MCL Tier 2\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
	49	+\|[NIN](NIN)\|MCL Tier 2\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
	50	+\|[OGDHL](OGDHL)\|MCL Tier 2\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
	51	+\|[PCDHB2](PCDHB2)\|MCL Tier 2\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
	52	+\|[PCSK2](PCSK2)\|MCL Tier 2\|[Bea et al](papers/beaLandscapeSomaticMutations2013)\|\|\|
	53	+\|[PDLIM3](PDLIM3)\|MCL Tier 2\|[Bea et al](papers/beaLandscapeSomaticMutations2013)\|\|\|
	54	+\|[PLXNB3](PLXNB3)\|MCL Tier 2\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|[@spinaGeneticsNodalMarginal2016]\|\|
	55	+\|[RGS4](RGS4)\|MCL Tier 2\|[Bea et al](papers/beaLandscapeSomaticMutations2013)\|\|\|
	56	+\|[ROBO2](ROBO2)\|MCL Tier 2\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
	57	+\|[SALL3](SALL3)\|MCL Tier 2\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|[@loveGeneticLandscapeMutations2012]\|\|
	58	+\|[SI](SI)\|MCL Tier 2\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
	59	+\|[SLC17A6](SLC17A6)\|MCL Tier 2\|[Bea et al](papers/beaLandscapeSomaticMutations2013)\|\|\|
	60	+\|[SMARCB1](SMARCB1)\|MCL Tier 2\|[Nadeu et al](papers/nadeuGenomicEpigenomicInsights2020)\|\|\|
	61	+\|[SMC1A](SMC1A)\|MCL Tier 2\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
	62	+\|[TBC1D26](TBC1D26)\|MCL Tier 2\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
	63	+\|[TNRC6B](TNRC6B)\|MCL Tier 2\|[Bea et al](papers/beaLandscapeSomaticMutations2013)\|\|\|
	64	+\|[TRPM6](TRPM6)\|MCL Tier 2\|[Bea et al](papers/beaLandscapeSomaticMutations2013)\|\|\|
	65	+\|[ZNF117](ZNF117)\|MCL Tier 2\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
	66	+\|[ZNF296](ZNF296)\|MCL Tier 2\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
20	67
21		-\|Gene\|Summary\| First MCL study \| Other entities \| QC result \|
22		-\|:-:\|:--:\|:-:\|:-\|:-\|
23		-\|[ABCA3](ABCA3)\|Tier 2 GE[@beaLandscapeSomaticMutations2013]\|[Bea et al](papers/beaLandscapeSomaticMutations2013)\|[@zhangGeneticHeterogeneityDiffuse2013]\|\|
24		-\|[ABCC9](ABCC9)\|Tier 2 GE[@beaLandscapeSomaticMutations2013]\|[Bea et al](papers/beaLandscapeSomaticMutations2013)\|\|\|
25		-\|[ANK2](ANK2)\|Tier 2 GE[@zhangGenomicLandscapeMantle2014]\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|[@zhangGeneticHeterogeneityDiffuse2013]\|\|
26		-\|[ARID1B](ARID1B)\|Tier 2 GE\|\|[@reddyGeneticFunctionalDrivers2017]\|\|
27		-\|[ATP11C](ATP11C)\|Tier 2 GE[@zhangGenomicLandscapeMantle2014]\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
28		-\|[B2M](B2M)\|Tier 2 GE[@pararajalingamCodingNoncodingDrivers2020], FE[@challa-malladiCombinedGeneticInactivation2011]\|[Pararajalingam et al](papers/pararajalingamCodingNoncodingDrivers2020)\|[@morinFrequentMutationHistonemodifying2011; @reichelFlowSortingExome2015]\|\|
29		-\|[BCOR](BCOR)\|Tier 2 GE[@nadeuGenomicEpigenomicInsights2020]\|[Nadeu et al](papers/nadeuGenomicEpigenomicInsights2020)\|[@jalladesExomeSequencingIdentifies2017]\|\|
30		-\|[CDH8](CDH8)\|Tier 2 GE[@zhangGenomicLandscapeMantle2014]\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|[@reddyGeneticFunctionalDrivers2017]\|\|
31		-\|[CHMP4C](CHMP4C)\|Tier 2 GE[@beaLandscapeSomaticMutations2013]\|[Bea et al](papers/beaLandscapeSomaticMutations2013)\|\|\|
32		-\|[COL11A1](COL11A1)\|Tier 2 GE[@zhangGenomicLandscapeMantle2014]\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
33		-\|[COL16A1](COL16A1)\|Tier 2 GE[@zhangGenomicLandscapeMantle2014]\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
34		-\|[CRYBG3](CRYBG3)\|Tier 2 GE[@beaLandscapeSomaticMutations2013]\|[Bea et al](papers/beaLandscapeSomaticMutations2013)\|\|\|
35		-\|[CTNNA2](CTNNA2)\|Tier 2 GE[@zhangGenomicLandscapeMantle2014]\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
36		-\|[DCP1B](DCP1B)\|Tier 2 GE[@beaLandscapeSomaticMutations2013]\|[Bea et al](papers/beaLandscapeSomaticMutations2013)\|\|\|
37		-\|[DHDH](DHDH)\|Tier 2 GE[@zhangGenomicLandscapeMantle2014]\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
38		-\|[DLC1](DLC1)\|Tier 2 GE[@zhangGenomicLandscapeMantle2014]\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
39		-\|[DLGAP2](DLGAP2)\|Tier 2 GE[@beaLandscapeSomaticMutations2013]\|[Bea et al](papers/beaLandscapeSomaticMutations2013)\|\|\|
40		-\|[DNAJC6](DNAJC6)\|Tier 2 GE[@beaLandscapeSomaticMutations2013]\|[Bea et al](papers/beaLandscapeSomaticMutations2013)\|\|\|
41		-\|[EIF2AK4](EIF2AK4)\|Tier 2 GE[@zhangGenomicLandscapeMantle2014]\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
42		-\|[ESX1](ESX1)\|Tier 2 GE[@zhangGenomicLandscapeMantle2014]\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
43		-\|[FAT4](FAT4)\|Tier 2 GE[@zhangGenomicLandscapeMantle2014]\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|[@morinMutationalStructuralAnalysis2013; @parryWholeExomeSequencing2013]\|\|
44		-\|[GRIN2A](GRIN2A)\|Tier 2 GE[@zhangGenomicLandscapeMantle2014]\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
45		-\|[HEPH](HEPH)\|Tier 2 GE[@zhangGenomicLandscapeMantle2014]\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
46		-\|[KCNC2](KCNC2)\|Tier 2 GE[@beaLandscapeSomaticMutations2013]\|[Bea et al](papers/beaLandscapeSomaticMutations2013)\|\|\|
47		-\|[KIAA1671](KIAA1671)\|Tier 2 GE[@beaLandscapeSomaticMutations2013]\|[Bea et al](papers/beaLandscapeSomaticMutations2013)\|\|\|
48		-\|[KMT2C](KMT2C)\|Tier 2 GE[@zhangGenomicLandscapeMantle2014]\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|[@sarkozyMutationalLandscapeGray2021; @zhangGeneticHeterogeneityDiffuse2013; @zhouSporadicEndemicBurkitt2019]\|\|
49		-\|[LUZP4](LUZP4)\|Tier 2 GE[@beaLandscapeSomaticMutations2013]\|[Bea et al](papers/beaLandscapeSomaticMutations2013)\|\|\|
50		-\|[MRGPRF](MRGPRF)\|Tier 2 GE[@zhangGenomicLandscapeMantle2014]\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
51		-\|[NIN](NIN)\|Tier 2 GE[@zhangGenomicLandscapeMantle2014]\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
52		-\|[OGDHL](OGDHL)\|Tier 2 GE[@zhangGenomicLandscapeMantle2014]\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
53		-\|[PCDHB2](PCDHB2)\|Tier 2 GE[@zhangGenomicLandscapeMantle2014]\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
54		-\|[PCSK2](PCSK2)\|Tier 2 GE[@beaLandscapeSomaticMutations2013]\|[Bea et al](papers/beaLandscapeSomaticMutations2013)\|\|\|
55		-\|[PDLIM3](PDLIM3)\|Tier 2 GE[@beaLandscapeSomaticMutations2013]\|[Bea et al](papers/beaLandscapeSomaticMutations2013)\|\|\|
56		-\|[PLXNB3](PLXNB3)\|Tier 2 GE[@zhangGenomicLandscapeMantle2014]\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|[@spinaGeneticsNodalMarginal2016]\|\|
57		-\|[RGS4](RGS4)\|Tier 2 GE[@beaLandscapeSomaticMutations2013]\|[Bea et al](papers/beaLandscapeSomaticMutations2013)\|\|\|
58		-\|[ROBO2](ROBO2)\|Tier 2 GE[@zhangGenomicLandscapeMantle2014]\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
59		-\|[SALL3](SALL3)\|Tier 2 GE[@zhangGenomicLandscapeMantle2014]\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|[@loveGeneticLandscapeMutations2012]\|\|
60		-\|[SI](SI)\|Tier 2 GE[@zhangGenomicLandscapeMantle2014]\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
61		-\|[SLC17A6](SLC17A6)\|Tier 2 GE[@beaLandscapeSomaticMutations2013]\|[Bea et al](papers/beaLandscapeSomaticMutations2013)\|\|\|
62		-\|[SMARCB1](SMARCB1)\|Tier 2 GE[@nadeuGenomicEpigenomicInsights2020]\|[Nadeu et al](papers/nadeuGenomicEpigenomicInsights2020)\|\|\|
63		-\|[SMC1A](SMC1A)\|Tier 2 GE[@zhangGenomicLandscapeMantle2014]\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
64		-\|[TBC1D26](TBC1D26)\|Tier 2 GE[@zhangGenomicLandscapeMantle2014]\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
65		-\|[TNRC6B](TNRC6B)\|Tier 2 GE[@beaLandscapeSomaticMutations2013]\|[Bea et al](papers/beaLandscapeSomaticMutations2013)\|\|\|
66		-\|[TRPM6](TRPM6)\|Tier 2 GE[@beaLandscapeSomaticMutations2013]\|[Bea et al](papers/beaLandscapeSomaticMutations2013)\|\|\|
67		-\|[ZNF117](ZNF117)\|Tier 2 GE[@zhangGenomicLandscapeMantle2014]\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
68		-\|[ZNF296](ZNF296)\|Tier 2 GE[@zhangGenomicLandscapeMantle2014]\|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)\|\|\|
69	68
70		-## Tier 3, retired MCL genes
71		-
72		-### 0 total
73		-
74		-\|Gene\|Summary\| First MCL study \| Other entities \| QC result \|
75		-\|:-:\|:--:\|:-:\|:-\|:-\|
76	69
77	70
78	71	# References