b7d952071dc721b769e7373837727490933a5ddd
FL_genes.md
| ... | ... | @@ -5,8 +5,6 @@ csl: 'NLM.csl' |
| 5 | 5 | link-citations: true |
| 6 | 6 | --- |
| 7 | 7 | |
| 8 | -# FL genes |
|
| 9 | - |
|
| 10 | 8 | ## Origins of FL genes |
| 11 | 9 | |
| 12 | 10 |  |
| ... | ... | @@ -17,71 +15,71 @@ link-citations: true |
| 17 | 15 | |
| 18 | 16 | |Gene|Tier| Relevant references| |
| 19 | 17 | |:-:|:-:|:-| |
| 20 | -|[ACTB](ACTB)|1, aSHM|[@wienandGenomicAnalysesFlowsorted2019b; @lohrDiscoveryPrioritizationSomatic2012a]| |
|
| 21 | -|[ARID1A](ARID1A)|1|[@zhangGeneticHeterogeneityDiffuse2013; @krysiakRecurrentSomaticMutations2017b; @wienandGenomicAnalysesFlowsorted2019b; @rossiCodingGenomeSplenic2012c; @loveGeneticLandscapeMutations2012]| |
|
| 18 | +|[ACTB](ACTB)|1, aSHM|[@lohrDiscoveryPrioritizationSomatic2012a; @wienandGenomicAnalysesFlowsorted2019b]| |
|
| 19 | +|[ARID1A](ARID1A)|1|[@zhangGeneticHeterogeneityDiffuse2013; @rossiCodingGenomeSplenic2012c; @krysiakRecurrentSomaticMutations2017b; @wienandGenomicAnalysesFlowsorted2019b; @loveGeneticLandscapeMutations2012]| |
|
| 22 | 20 | |[ATP6AP1](ATP6AP1)|1|[@okosunRecurrentMTORC1activatingRRAGC2016a]| |
| 23 | 21 | |[ATP6V1B2](ATP6V1B2)|1|[@okosunRecurrentMTORC1activatingRRAGC2016a]| |
| 24 | -|[B2M](B2M)|1|[@reichelFlowSortingExome2015a; @morinFrequentMutationHistonemodifying2011; @pararajalingamCodingNoncodingDrivers2020]| |
|
| 25 | -|[BCL2](BCL2)|1, aSHM|[@tanakaFrequentIncidenceSomatic1992; @burkhardtClinicalRelevanceMolecular2022b; @sarkozyMutationalLandscapeGray2021a; @morinFrequentMutationHistonemodifying2011]| |
|
| 26 | -|[BCL6](BCL6)|1, aSHM|[@morinFrequentMutationHistonemodifying2011; @loveGeneticLandscapeMutations2012]| |
|
| 27 | -|[BCL7A](BCL7A)|1, aSHM|[@krysiakRecurrentSomaticMutations2017b; @arthurGenomewideDiscoverySomatic2018; @reichelFlowSortingExome2015a; @grandeGenomewideDiscoverySomatic2019]| |
|
| 22 | +|[B2M](B2M)|1|[@morinFrequentMutationHistonemodifying2011; @reichelFlowSortingExome2015a; @pararajalingamCodingNoncodingDrivers2020]| |
|
| 23 | +|[BCL2](BCL2)|1, aSHM|[@morinFrequentMutationHistonemodifying2011; @sarkozyMutationalLandscapeGray2021a; @burkhardtClinicalRelevanceMolecular2022b; @tanakaFrequentIncidenceSomatic1992]| |
|
| 24 | +|[BCL6](BCL6)|1, aSHM|[@loveGeneticLandscapeMutations2012; @morinFrequentMutationHistonemodifying2011]| |
|
| 25 | +|[BCL7A](BCL7A)|1, aSHM|[@reichelFlowSortingExome2015a; @grandeGenomewideDiscoverySomatic2019; @arthurGenomewideDiscoverySomatic2018; @krysiakRecurrentSomaticMutations2017b]| |
|
| 28 | 26 | |[BIRC6](BIRC6)|1|[@sarkozyMutationalLandscapeGray2021a; @reddyGeneticFunctionalDrivers2017]| |
| 29 | -|[BTG1](BTG1)|1, aSHM|[@sarkozyMutationalLandscapeGray2021a; @burkhardtClinicalRelevanceMolecular2022b; @morinFrequentMutationHistonemodifying2011]| |
|
| 27 | +|[BTG1](BTG1)|1, aSHM|[@burkhardtClinicalRelevanceMolecular2022b; @morinFrequentMutationHistonemodifying2011; @sarkozyMutationalLandscapeGray2021a]| |
|
| 30 | 28 | |[BTG2](BTG2)|1, aSHM|[@loveGeneticLandscapeMutations2012; @morinFrequentMutationHistonemodifying2011]| |
| 31 | -|[BTK](BTK)|1|[@krysiakRecurrentSomaticMutations2017b; @albuquerqueEnhancingKnowledgeDiscovery2017a]| |
|
| 32 | -|[CARD11](CARD11)|1|[@yanBCRTLRSignaling2012a; @wuGeneticHeterogeneityPrimary2016; @paneaWholeGenomeLandscape2019; @lenzOncogenicCARD11Mutations2008; @morinFrequentMutationHistonemodifying2011]| |
|
| 33 | -|[CCND3](CCND3)|1|[@deschGenotypingCirculatingTumor2020; @jalladesExomeSequencingIdentifies2017; @richterRecurrentMutationID32012a; @morinFrequentMutationHistonemodifying2011]| |
|
| 34 | -|[CD83](CD83)|1, aSHM|[@morinMutationalStructuralAnalysis2013; @russler-germainMutationsAssociatedProgression2023b; @dunsCharacterizationDLBCLPMBL2021b; @paneaWholeGenomeLandscape2019]| |
|
| 35 | -|[CREBBP](CREBBP)|1|[@parryWholeExomeSequencing2013; @pasqualucciInactivatingMutationsAcetyltransferase2011a; @dunsCharacterizationDLBCLPMBL2021b; @loveGeneticLandscapeMutations2012]| |
|
| 29 | +|[BTK](BTK)|1|[@albuquerqueEnhancingKnowledgeDiscovery2017a; @krysiakRecurrentSomaticMutations2017b]| |
|
| 30 | +|[CARD11](CARD11)|1|[@yanBCRTLRSignaling2012a; @wuGeneticHeterogeneityPrimary2016; @morinFrequentMutationHistonemodifying2011; @paneaWholeGenomeLandscape2019; @lenzOncogenicCARD11Mutations2008]| |
|
| 31 | +|[CCND3](CCND3)|1|[@deschGenotypingCirculatingTumor2020; @richterRecurrentMutationID32012a; @morinFrequentMutationHistonemodifying2011; @jalladesExomeSequencingIdentifies2017]| |
|
| 32 | +|[CD83](CD83)|1, aSHM|[@morinMutationalStructuralAnalysis2013; @russler-germainMutationsAssociatedProgression2023b; @paneaWholeGenomeLandscape2019; @dunsCharacterizationDLBCLPMBL2021b]| |
|
| 33 | +|[CREBBP](CREBBP)|1|[@loveGeneticLandscapeMutations2012; @pasqualucciInactivatingMutationsAcetyltransferase2011a; @dunsCharacterizationDLBCLPMBL2021b; @parryWholeExomeSequencing2013]| |
|
| 36 | 34 | |[CTSS](CTSS)|1|[@barariaCathepsinAlterationsInduce2020c]| |
| 37 | -|[DTX1](DTX1)|1, aSHM|[@rossiCodingGenomeSplenic2012c; @paneaWholeGenomeLandscape2019; @gomezUltraDeepSequencingReveals2023; @schmitzGeneticsPathogenesisDiffuse2018a]| |
|
| 38 | -|[EBF1](EBF1)|1, aSHM|[@reichelFlowSortingExome2015a; @thomasGeneticSubgroupsInform2023; @bohleRoleEarlyBcell2013]| |
|
| 39 | -|[EEF1A1](EEF1A1)|1|[@hubschmannMutationalMechanismsShaping2021b; @reichelFlowSortingExome2015a]| |
|
| 40 | -|[EP300](EP300)|1|[@rossiCodingGenomeSplenic2012c; @pasqualucciInactivatingMutationsAcetyltransferase2011a; @paneaWholeGenomeLandscape2019]| |
|
| 41 | -|[EZH2](EZH2)|1|[@loveGeneticLandscapeMutations2012; @morinSomaticMutationsAltering2010a; @mottokIntegrativeGenomicAnalysis2019b]| |
|
| 42 | -|[FAS](FAS)|1|[@spinaGeneticsNodalMarginal2016b; @schollMutationsRegionFAS2007]| |
|
| 43 | -|[FOXO1](FOXO1)|1|[@morinFrequentMutationHistonemodifying2011; @dunsCharacterizationDLBCLPMBL2021b; @schmitzBurkittLymphomaPathogenesis2012]| |
|
| 44 | -|[GNA13](GNA13)|1|[@loveGeneticLandscapeMutations2012; @morinFrequentMutationHistonemodifying2011; @reichelFlowSortingExome2015a]| |
|
| 35 | +|[DTX1](DTX1)|1, aSHM|[@rossiCodingGenomeSplenic2012c; @paneaWholeGenomeLandscape2019; @schmitzGeneticsPathogenesisDiffuse2018a; @gomezUltraDeepSequencingReveals2023]| |
|
| 36 | +|[EBF1](EBF1)|1, aSHM|[@reichelFlowSortingExome2015a; @bohleRoleEarlyBcell2013; @thomasGeneticSubgroupsInform2023]| |
|
| 37 | +|[EEF1A1](EEF1A1)|1|[@reichelFlowSortingExome2015a; @hubschmannMutationalMechanismsShaping2021b]| |
|
| 38 | +|[EP300](EP300)|1|[@pasqualucciInactivatingMutationsAcetyltransferase2011a; @rossiCodingGenomeSplenic2012c; @paneaWholeGenomeLandscape2019]| |
|
| 39 | +|[EZH2](EZH2)|1|[@loveGeneticLandscapeMutations2012; @mottokIntegrativeGenomicAnalysis2019b; @morinSomaticMutationsAltering2010a]| |
|
| 40 | +|[FAS](FAS)|1|[@schollMutationsRegionFAS2007; @spinaGeneticsNodalMarginal2016b]| |
|
| 41 | +|[FOXO1](FOXO1)|1|[@dunsCharacterizationDLBCLPMBL2021b; @morinFrequentMutationHistonemodifying2011; @schmitzBurkittLymphomaPathogenesis2012]| |
|
| 42 | +|[GNA13](GNA13)|1|[@morinFrequentMutationHistonemodifying2011; @reichelFlowSortingExome2015a; @loveGeneticLandscapeMutations2012]| |
|
| 45 | 43 | |[GNAI2](GNAI2)|1|[@morinMutationalStructuralAnalysis2013; @grandeGenomewideDiscoverySomatic2019]| |
| 46 | -|[HIST1H1B](HIST1H1B)|1, aSHM|[@chapuyMolecularSubtypesDiffuse2018b; @krysiakRecurrentSomaticMutations2017b; @sarkozyMutationalLandscapeGray2021a]| |
|
| 47 | -|[HIST1H1C](HIST1H1C)|1, aSHM|[@paneaWholeGenomeLandscape2019; @morinFrequentMutationHistonemodifying2011]| |
|
| 48 | -|[HIST1H1D](HIST1H1D)|1, aSHM|[@morinMutationalStructuralAnalysis2013; @jalladesExomeSequencingIdentifies2017; @krysiakRecurrentSomaticMutations2017b]| |
|
| 49 | -|[HIST1H1E](HIST1H1E)|1, aSHM|[@reichelFlowSortingExome2015a; @krysiakRecurrentSomaticMutations2017b; @grandeGenomewideDiscoverySomatic2019; @morinMutationalStructuralAnalysis2013]| |
|
| 44 | +|[HIST1H1B](HIST1H1B)|1, aSHM|[@chapuyMolecularSubtypesDiffuse2018b; @sarkozyMutationalLandscapeGray2021a; @krysiakRecurrentSomaticMutations2017b]| |
|
| 45 | +|[HIST1H1C](HIST1H1C)|1, aSHM|[@morinFrequentMutationHistonemodifying2011; @paneaWholeGenomeLandscape2019]| |
|
| 46 | +|[HIST1H1D](HIST1H1D)|1, aSHM|[@krysiakRecurrentSomaticMutations2017b; @jalladesExomeSequencingIdentifies2017; @morinMutationalStructuralAnalysis2013]| |
|
| 47 | +|[HIST1H1E](HIST1H1E)|1, aSHM|[@krysiakRecurrentSomaticMutations2017b; @reichelFlowSortingExome2015a; @morinMutationalStructuralAnalysis2013; @grandeGenomewideDiscoverySomatic2019]| |
|
| 50 | 48 | |[HIST1H2AC](HIST1H2AC)|1, aSHM|[@morinMutationalStructuralAnalysis2013; @krysiakRecurrentSomaticMutations2017b]| |
| 51 | -|[HIST1H2AG](HIST1H2AG)|1, aSHM|[@rossiCodingGenomeSplenic2012c; @morinMutationalStructuralAnalysis2013; @krysiakRecurrentSomaticMutations2017b; @paneaWholeGenomeLandscape2019]| |
|
| 52 | -|[HIST1H2AM](HIST1H2AM)|1, aSHM|[@krysiakRecurrentSomaticMutations2017b; @paneaWholeGenomeLandscape2019]| |
|
| 53 | -|[HIST1H2BC](HIST1H2BC)|1, aSHM|[@reddyGeneticFunctionalDrivers2017; @krysiakRecurrentSomaticMutations2017b; @mottokIntegrativeGenomicAnalysis2019b]| |
|
| 49 | +|[HIST1H2AG](HIST1H2AG)|1, aSHM|[@krysiakRecurrentSomaticMutations2017b; @rossiCodingGenomeSplenic2012c; @paneaWholeGenomeLandscape2019; @morinMutationalStructuralAnalysis2013]| |
|
| 50 | +|[HIST1H2AM](HIST1H2AM)|1, aSHM|[@paneaWholeGenomeLandscape2019; @krysiakRecurrentSomaticMutations2017b]| |
|
| 51 | +|[HIST1H2BC](HIST1H2BC)|1, aSHM|[@mottokIntegrativeGenomicAnalysis2019b; @reddyGeneticFunctionalDrivers2017; @krysiakRecurrentSomaticMutations2017b]| |
|
| 54 | 52 | |[HIST1H2BD](HIST1H2BD)|1, aSHM|[@krysiakRecurrentSomaticMutations2017b]| |
| 55 | 53 | |[HIST1H2BG](HIST1H2BG)|1, aSHM|[@krysiakRecurrentSomaticMutations2017b]| |
| 56 | 54 | |[HIST1H3B](HIST1H3B)|1, aSHM|[@reichelFlowSortingExome2015a; @zhangGeneticHeterogeneityDiffuse2013]| |
| 57 | 55 | |[HIST1H3G](HIST1H3G)|1, aSHM|[@krysiakRecurrentSomaticMutations2017b]| |
| 58 | 56 | |[HVCN1](HVCN1)|1|[@krysiakRecurrentSomaticMutations2017b]| |
| 59 | -|[IRF4](IRF4)|1, aSHM|[@morinFrequentMutationHistonemodifying2011; @mottokIntegrativeGenomicAnalysis2019b]| |
|
| 60 | -|[IRF8](IRF8)|1, aSHM|[@morinFrequentMutationHistonemodifying2011; @mottokIntegrativeGenomicAnalysis2019b; @paneaWholeGenomeLandscape2019]| |
|
| 57 | +|[IRF4](IRF4)|1, aSHM|[@mottokIntegrativeGenomicAnalysis2019b; @morinFrequentMutationHistonemodifying2011]| |
|
| 58 | +|[IRF8](IRF8)|1, aSHM|[@paneaWholeGenomeLandscape2019; @mottokIntegrativeGenomicAnalysis2019b; @morinFrequentMutationHistonemodifying2011]| |
|
| 61 | 59 | |[ITPKB](ITPKB)|1, aSHM|[@schmitzGeneticsPathogenesisDiffuse2018a; @reichelFlowSortingExome2015a]| |
| 62 | -|[KLF2](KLF2)|1, aSHM|[@deschGenotypingCirculatingTumor2020; @jalladesExomeSequencingIdentifies2017; @pasqualucciAnalysisCodingGenome2011]| |
|
| 63 | -|[KLHL6](KLHL6)|1, aSHM|[@paneaWholeGenomeLandscape2019; @ganapathiGeneticLandscapeDural2016; @morinFrequentMutationHistonemodifying2011]| |
|
| 64 | -|[KMT2D](KMT2D)|1|[@morinFrequentMutationHistonemodifying2011; @deschGenotypingCirculatingTumor2020; @grandeGenomewideDiscoverySomatic2019; @beaLandscapeSomaticMutations2013; @rossiCodingGenomeSplenic2012c]| |
|
| 65 | -|[LTB](LTB)|1, aSHM|[@chapuyMolecularSubtypesDiffuse2018b; @deschGenotypingCirculatingTumor2020; @paneaWholeGenomeLandscape2019]| |
|
| 60 | +|[KLF2](KLF2)|1, aSHM|[@deschGenotypingCirculatingTumor2020; @pasqualucciAnalysisCodingGenome2011; @jalladesExomeSequencingIdentifies2017]| |
|
| 61 | +|[KLHL6](KLHL6)|1, aSHM|[@ganapathiGeneticLandscapeDural2016; @morinFrequentMutationHistonemodifying2011; @paneaWholeGenomeLandscape2019]| |
|
| 62 | +|[KMT2D](KMT2D)|1|[@morinFrequentMutationHistonemodifying2011; @rossiCodingGenomeSplenic2012c; @deschGenotypingCirculatingTumor2020; @grandeGenomewideDiscoverySomatic2019; @beaLandscapeSomaticMutations2013]| |
|
| 63 | +|[LTB](LTB)|1, aSHM|[@paneaWholeGenomeLandscape2019; @chapuyMolecularSubtypesDiffuse2018b; @deschGenotypingCirculatingTumor2020]| |
|
| 66 | 64 | |[MAP2K1](MAP2K1)|1|[@louissaintPediatrictypeNodalFollicular2016a; @shinBRAFV600EMAP2K12015]| |
| 67 | -|[MEF2B](MEF2B)|1, aSHM|[@morinFrequentMutationHistonemodifying2011; @beaLandscapeSomaticMutations2013]| |
|
| 65 | +|[MEF2B](MEF2B)|1, aSHM|[@beaLandscapeSomaticMutations2013; @morinFrequentMutationHistonemodifying2011]| |
|
| 68 | 66 | |[MEF2C](MEF2C)|1, aSHM|[@arthurGenomewideDiscoverySomatic2018]| |
| 69 | 67 | |[PCLO](PCLO)|1|[@lohrDiscoveryPrioritizationSomatic2012a]| |
| 70 | -|[PIM1](PIM1)|1, aSHM|[@pasqualucciHypermutationMultipleProtooncogenes2001a; @dunsCharacterizationDLBCLPMBL2021b; @burkhardtClinicalRelevanceMolecular2022b]| |
|
| 68 | +|[PIM1](PIM1)|1, aSHM|[@burkhardtClinicalRelevanceMolecular2022b; @pasqualucciHypermutationMultipleProtooncogenes2001a; @dunsCharacterizationDLBCLPMBL2021b]| |
|
| 71 | 69 | |[POU2AF1](POU2AF1)|1|[@krysiakRecurrentSomaticMutations2017b]| |
| 72 | -|[POU2F2](POU2F2)|1|[@zhangGeneticHeterogeneityDiffuse2013; @krysiakRecurrentSomaticMutations2017b]| |
|
| 70 | +|[POU2F2](POU2F2)|1|[@krysiakRecurrentSomaticMutations2017b; @zhangGeneticHeterogeneityDiffuse2013]| |
|
| 73 | 71 | |[PTPRD](PTPRD)|1|[@spinaGeneticsNodalMarginal2016b]| |
| 74 | 72 | |[RRAGC](RRAGC)|1|[@okosunRecurrentMTORC1activatingRRAGC2016a]| |
| 75 | 73 | |[S1PR2](S1PR2)|1, aSHM|[@morinFrequentMutationHistonemodifying2011; @muppidiLossSignalingGa132014b]| |
| 76 | -|[SGK1](SGK1)|1, aSHM|[@morinFrequentMutationHistonemodifying2011; @dunsCharacterizationDLBCLPMBL2021b]| |
|
| 77 | -|[SMARCA4](SMARCA4)|1|[@zhangGeneticHeterogeneityDiffuse2013; @krysiakRecurrentSomaticMutations2017b; @nadeuGenomicEpigenomicInsights2020b; @richterRecurrentMutationID32012a]| |
|
| 78 | -|[SOCS1](SOCS1)|1, aSHM|[@morinFrequentMutationHistonemodifying2011; @wenigerMutationsTumorSuppressor2006a]| |
|
| 79 | -|[STAT6](STAT6)|1|[@yildizActivatingSTAT6Mutations2015c; @ritzRecurrentMutationsSTAT62009a]| |
|
| 74 | +|[SGK1](SGK1)|1, aSHM|[@dunsCharacterizationDLBCLPMBL2021b; @morinFrequentMutationHistonemodifying2011]| |
|
| 75 | +|[SMARCA4](SMARCA4)|1|[@richterRecurrentMutationID32012a; @zhangGeneticHeterogeneityDiffuse2013; @krysiakRecurrentSomaticMutations2017b; @nadeuGenomicEpigenomicInsights2020b]| |
|
| 76 | +|[SOCS1](SOCS1)|1, aSHM|[@wenigerMutationsTumorSuppressor2006a; @morinFrequentMutationHistonemodifying2011]| |
|
| 77 | +|[STAT6](STAT6)|1|[@ritzRecurrentMutationsSTAT62009a; @yildizActivatingSTAT6Mutations2015c]| |
|
| 80 | 78 | |[TBL1XR1](TBL1XR1)|1|[@mareschalWholeExomeSequencing2016; @rossiCodingGenomeSplenic2012c]| |
| 81 | 79 | |[TMSB4X](TMSB4X)|1, aSHM|[@albuquerqueEnhancingKnowledgeDiscovery2017a]| |
| 82 | 80 | |[TNFAIP3](TNFAIP3)|1|[@rossiAlterationBIRC3Multiple2011a; @schmitzTNFAIP3A20Tumor2009a; @compagnoMutationsMultipleGenes2009a]| |
| 83 | 81 | |[TNFRSF14](TNFRSF14)|1|[@spinaGeneticsNodalMarginal2016b; @cheungAcquiredTNFRSF14Mutations2010a]| |
| 84 | -|[TP53](TP53)|1|[@rossiCodingGenomeSplenic2012c; @beaLandscapeSomaticMutations2013; @tiacciPervasiveMutationsJAKSTAT2018b; @morinFrequentMutationHistonemodifying2011; @wildaInactivationARFMDM2p53Pathway2004]| |
|
| 82 | +|[TP53](TP53)|1|[@rossiCodingGenomeSplenic2012c; @morinFrequentMutationHistonemodifying2011; @tiacciPervasiveMutationsJAKSTAT2018b; @wildaInactivationARFMDM2p53Pathway2004; @beaLandscapeSomaticMutations2013]| |
|
| 85 | 83 | |[VMA21](VMA21)|1|[@hubschmannMutationalMechanismsShaping2021b]| |
| 86 | 84 | |
| 87 | 85 | ## Tier 2 FL genes |
| ... | ... | @@ -91,41 +89,41 @@ link-citations: true |
| 91 | 89 | |Gene|Tier| Relevant references| |
| 92 | 90 | |:-:|:-:|:-| |
| 93 | 91 | |[ABL2](ABL2)|2|[@russler-germainMutationsAssociatedProgression2023b]| |
| 94 | -|[ACTG1](ACTG1)|2, aSHM|[@spinaGeneticsNodalMarginal2016b; @hubschmannMutationalMechanismsShaping2021b; @deschGenotypingCirculatingTumor2020]| |
|
| 92 | +|[ACTG1](ACTG1)|2, aSHM|[@hubschmannMutationalMechanismsShaping2021b; @spinaGeneticsNodalMarginal2016b; @deschGenotypingCirculatingTumor2020]| |
|
| 95 | 93 | |[ATP6V1A](ATP6V1A)|2|[@hubschmannMutationalMechanismsShaping2021b]| |
| 96 | -|[BCL10](BCL10)|2|[@spinaGeneticsNodalMarginal2016b; @russler-germainMutationsAssociatedProgression2023b; @morinFrequentMutationHistonemodifying2011]| |
|
| 94 | +|[BCL10](BCL10)|2|[@spinaGeneticsNodalMarginal2016b; @morinFrequentMutationHistonemodifying2011; @russler-germainMutationsAssociatedProgression2023b]| |
|
| 97 | 95 | |[CCDC42BPB](CCDC42BPB)|2|[@hubschmannMutationalMechanismsShaping2021b]| |
| 98 | 96 | |[CD70](CD70)|2|[@morinFrequentMutationHistonemodifying2011; @russler-germainMutationsAssociatedProgression2023b]| |
| 99 | -|[CD79B](CD79B)|2|[@morinFrequentMutationHistonemodifying2011; @paneaWholeGenomeLandscape2019]| |
|
| 97 | +|[CD79B](CD79B)|2|[@paneaWholeGenomeLandscape2019; @morinFrequentMutationHistonemodifying2011]| |
|
| 100 | 98 | |[CILP](CILP)|2|[@russler-germainMutationsAssociatedProgression2023b]| |
| 101 | 99 | |[CPNE8](CPNE8)|2|[@hubschmannMutationalMechanismsShaping2021b]| |
| 102 | -|[CXCR4](CXCR4)|2, aSHM|[@paneaWholeGenomeLandscape2019; @khodabakhshiRecurrentTargetsAberrant2012; @krysiakRecurrentSomaticMutations2017b]| |
|
| 100 | +|[CXCR4](CXCR4)|2, aSHM|[@khodabakhshiRecurrentTargetsAberrant2012; @krysiakRecurrentSomaticMutations2017b; @paneaWholeGenomeLandscape2019]| |
|
| 103 | 101 | |[CYP2A6](CYP2A6)|2|[@russler-germainMutationsAssociatedProgression2023b]| |
| 104 | -|[DDX3X](DDX3X)|2|[@schmitzBurkittLymphomaPathogenesis2012; @mottokIntegrativeGenomicAnalysis2019b; @schmitzGeneticsPathogenesisDiffuse2018a]| |
|
| 102 | +|[DDX3X](DDX3X)|2|[@schmitzGeneticsPathogenesisDiffuse2018a; @schmitzBurkittLymphomaPathogenesis2012; @mottokIntegrativeGenomicAnalysis2019b]| |
|
| 105 | 103 | |[DHX15](DHX15)|2|[@hubschmannMutationalMechanismsShaping2021b]| |
| 106 | -|[DUSP2](DUSP2)|2, aSHM|[@dunsCharacterizationDLBCLPMBL2021b; @morinMutationalStructuralAnalysis2013]| |
|
| 107 | -|[EGR1](EGR1)|2|[@krysiakRecurrentSomaticMutations2017b; @reichelFlowSortingExome2015a; @rossiCodingGenomeSplenic2012c]| |
|
| 104 | +|[DUSP2](DUSP2)|2, aSHM|[@morinMutationalStructuralAnalysis2013; @dunsCharacterizationDLBCLPMBL2021b]| |
|
| 105 | +|[EGR1](EGR1)|2|[@krysiakRecurrentSomaticMutations2017b; @rossiCodingGenomeSplenic2012c; @reichelFlowSortingExome2015a]| |
|
| 108 | 106 | |[FZR1](FZR1)|2|[@hubschmannMutationalMechanismsShaping2021b]| |
| 109 | 107 | |[GBP7](GBP7)|2|[@russler-germainMutationsAssociatedProgression2023b]| |
| 110 | 108 | |[GRM6](GRM6)|2|[@russler-germainMutationsAssociatedProgression2023b]| |
| 111 | 109 | |[HIST1H2BM](HIST1H2BM)|2, aSHM|[@krysiakRecurrentSomaticMutations2017b]| |
| 112 | -|[HIST1H3I](HIST1H3I)|2, aSHM|[@paneaWholeGenomeLandscape2019; @krysiakRecurrentSomaticMutations2017b]| |
|
| 110 | +|[HIST1H3I](HIST1H3I)|2, aSHM|[@krysiakRecurrentSomaticMutations2017b; @paneaWholeGenomeLandscape2019]| |
|
| 113 | 111 | |[HLA-B](HLA-B)|2|[@wienandGenomicAnalysesFlowsorted2019b]| |
| 114 | 112 | |[HNRNPD](HNRNPD)|2|| |
| 115 | -|[IGLL5](IGLL5)|2, aSHM|[@paneaWholeGenomeLandscape2019; @russler-germainMutationsAssociatedProgression2023b; @deschGenotypingCirculatingTumor2020]| |
|
| 113 | +|[IGLL5](IGLL5)|2, aSHM|[@deschGenotypingCirculatingTumor2020; @paneaWholeGenomeLandscape2019; @russler-germainMutationsAssociatedProgression2023b]| |
|
| 116 | 114 | |[JUP](JUP)|2|[@hubschmannMutationalMechanismsShaping2021b]| |
| 117 | 115 | |[KIR3DL1](KIR3DL1)|2|[@russler-germainMutationsAssociatedProgression2023b]| |
| 118 | 116 | |[LAPTM5](LAPTM5)|2|[@hubschmannMutationalMechanismsShaping2021b]| |
| 119 | 117 | |[MAGEC1](MAGEC1)|2|[@russler-germainMutationsAssociatedProgression2023b]| |
| 120 | 118 | |[MAP7D1](MAP7D1)|2|[@russler-germainMutationsAssociatedProgression2023b]| |
| 121 | 119 | |[MGEA5](MGEA5)|2|[@hubschmannMutationalMechanismsShaping2021b]| |
| 122 | -|[MKI67](MKI67)|2|[@schmitzBurkittLymphomaPathogenesis2012; @russler-germainMutationsAssociatedProgression2023b]| |
|
| 123 | -|[MYC](MYC)|2, aSHM|[@jalladesExomeSequencingIdentifies2017; @pasqualucciHypermutationMultipleProtooncogenes2001a; @johnstonCmycHypermutationBurkitt1992; @dunsCharacterizationDLBCLPMBL2021b]| |
|
| 120 | +|[MKI67](MKI67)|2|[@russler-germainMutationsAssociatedProgression2023b; @schmitzBurkittLymphomaPathogenesis2012]| |
|
| 121 | +|[MYC](MYC)|2, aSHM|[@pasqualucciHypermutationMultipleProtooncogenes2001a; @jalladesExomeSequencingIdentifies2017; @johnstonCmycHypermutationBurkitt1992; @dunsCharacterizationDLBCLPMBL2021b]| |
|
| 124 | 122 | |[MYCBP2](MYCBP2)|2|[@hubschmannMutationalMechanismsShaping2021b]| |
| 125 | 123 | |[MYD88](MYD88)|2|[@yanBCRTLRSignaling2012a; @ngoOncogenicallyActiveMYD882011a]| |
| 126 | -|[NFKBIA](NFKBIA)|2|[@lakeMutationsNFKBIAEncoding2009; @russler-germainMutationsAssociatedProgression2023b; @wienandGenomicAnalysesFlowsorted2019b]| |
|
| 124 | +|[NFKBIA](NFKBIA)|2|[@lakeMutationsNFKBIAEncoding2009; @wienandGenomicAnalysesFlowsorted2019b; @russler-germainMutationsAssociatedProgression2023b]| |
|
| 127 | 125 | |[OR8H2](OR8H2)|2|[@russler-germainMutationsAssociatedProgression2023b]| |
| 128 | -|[P2RY8](P2RY8)|2|[@lohrDiscoveryPrioritizationSomatic2012a; @muppidiLossSignalingGa132014b]| |
|
| 126 | +|[P2RY8](P2RY8)|2|[@muppidiLossSignalingGa132014b; @lohrDiscoveryPrioritizationSomatic2012a]| |
|
| 129 | 127 | |[PDS5B](PDS5B)|2|[@morinMutationalStructuralAnalysis2013; @hubschmannMutationalMechanismsShaping2021b]| |
| 130 | 128 | |[PPP4C](PPP4C)|2|[@hubschmannMutationalMechanismsShaping2021b]| |
| 131 | 129 | |[PRKDC](PRKDC)|2|[@schmitzGeneticsPathogenesisDiffuse2018a; @hubschmannMutationalMechanismsShaping2021b]| |
| ... | ... | @@ -133,13 +131,13 @@ link-citations: true |
| 133 | 131 | |[RBM6](RBM6)|2|[@hubschmannMutationalMechanismsShaping2021b]| |
| 134 | 132 | |[SESN1](SESN1)|2|[@oricchioGeneticEpigeneticInactivation2017b]| |
| 135 | 133 | |[SHROOM3](SHROOM3)|2|[@russler-germainMutationsAssociatedProgression2023b]| |
| 136 | -|[SRRM2](SRRM2)|2|[@russler-germainMutationsAssociatedProgression2023b; @morinMutationalStructuralAnalysis2013]| |
|
| 134 | +|[SRRM2](SRRM2)|2|[@morinMutationalStructuralAnalysis2013; @russler-germainMutationsAssociatedProgression2023b]| |
|
| 137 | 135 | |[STAB2](STAB2)|2|[@russler-germainMutationsAssociatedProgression2023b]| |
| 138 | 136 | |[TMEM30A](TMEM30A)|2|[@morinFrequentMutationHistonemodifying2011]| |
| 139 | 137 | |[TPP1](TPP1)|2|[@hubschmannMutationalMechanismsShaping2021b]| |
| 140 | 138 | |[XIRP2](XIRP2)|2|[@russler-germainMutationsAssociatedProgression2023b]| |
| 141 | 139 | |[ZC3H12A](ZC3H12A)|2|[@arthurGenomewideDiscoverySomatic2018]| |
| 142 | -|[ZNF608](ZNF608)|2|[@zhangGeneticHeterogeneityDiffuse2013; @krysiakRecurrentSomaticMutations2017b]| |
|
| 140 | +|[ZNF608](ZNF608)|2|[@krysiakRecurrentSomaticMutations2017b; @zhangGeneticHeterogeneityDiffuse2013]| |
|
| 143 | 141 | |
| 144 | 142 | |
| 145 | 143 | # References |