b8707e547f9806c5d6dae2669cc0530e91723e3f
papers/loveGeneticLandscapeMutations2012.md
| ... | ... | @@ -45,15 +45,15 @@ All other BL studies, BL Tier 2, 101 |
| 45 | 45 | |[ACAD9](../ACAD9)|2 |★ ☆ ☆ ☆ ☆|**Fail**| |
| 46 | 46 | |[ACE](../ACE)|2 |★ ☆ ☆ ☆ ☆|**Fail**| |
| 47 | 47 | |[ATP2C2](../ATP2C2)|2 |★ ★ ☆ ☆ ☆|**Fail**| |
| 48 | -|[BCL6](../BCL6)|2 |★ ★ ★ ★ ☆|| |
|
| 48 | +|[BCL6](../BCL6)|2 |★ ★ ★ ★ ☆|**Pass**| |
|
| 49 | 49 | |[BRAF](../BRAF)|2 |★ ☆ ☆ ☆ ☆|**Fail**| |
| 50 | 50 | |[BRD4](../BRD4)|2 |★ ☆ ☆ ☆ ☆|**Fail**| |
| 51 | 51 | |[BTG2](../BTG2)|2 |★ ☆ ☆ ☆ ☆|**Fail**| |
| 52 | 52 | |[C6orf27](../C6orf27)|2 |★ ☆ ☆ ☆ ☆|**Fail**| |
| 53 | 53 | |[CAD](../CAD)|2 |★ ☆ ☆ ☆ ☆|**Fail**| |
| 54 | -|[CARD4](../CARD4)|2 |★ ★ ★ ★ ☆|| |
|
| 54 | +|[CARD4](../CARD4)|2 |★ ★ ★ ★ ☆|**Pass**| |
|
| 55 | 55 | |[CCT6B](../CCT6B)|2 |*Germline*|**Fail**| |
| 56 | -|[CDC73](../CDC73)|2 |★ ★ ★ ☆ ☆|| |
|
| 56 | +|[CDC73](../CDC73)|2 |★ ★ ★ ☆ ☆|**Pass**| |
|
| 57 | 57 | |[CDH17](../CDH17)|2 |★ ☆ ☆ ☆ ☆|**Fail**| |
| 58 | 58 | |[COL4A2](../COL4A2)|2 |★ ☆ ☆ ☆ ☆|**Fail**| |
| 59 | 59 | |[CREBBP](../CREBBP)|2 |★ ★ ★ ★ ☆|| |
| ... | ... | @@ -65,27 +65,27 @@ All other BL studies, BL Tier 2, 101 |
| 65 | 65 | |[EML2](../EML2)|2 |★ ☆ ☆ ☆ ☆|**Fail**| |
| 66 | 66 | |[ENTPD3](../ENTPD3)|2 |★ ★ ☆ ☆ ☆|**Fail**| |
| 67 | 67 | |[EPHB2](../EPHB2)|2 |★ ★ ☆ ☆ ☆|**Fail**| |
| 68 | -|[EZH2](../EZH2)|2 |★ ★ ★ ★ ★|| |
|
| 69 | -|[FAM129B](../FAM129B)|2 |★ ★ ☆ ☆ ☆|| |
|
| 68 | +|[EZH2](../EZH2)|2 |★ ★ ★ ★ ★|**Pass**| |
|
| 69 | +|[FAM129B](../FAM129B)|2 |★ ★ ☆ ☆ ☆|**Fail**| |
|
| 70 | 70 | |[FGFR3](../FGFR3)|2 |★ ☆ ☆ ☆ ☆|**Fail**| |
| 71 | 71 | |[FTCD](../FTCD)|2 |*Germline*|**Fail**| |
| 72 | -|[GGTLA4](../GGTLA4)|2 |★ ★ ★ ★ ☆|| |
|
| 72 | +|[GGTLA4](../GGTLA4)|2 |★ ★ ★ ★ ☆|**Pass**| |
|
| 73 | 73 | |[GRIK5](../GRIK5)|2 |★ ☆ ☆ ☆ ☆|**Fail**| |
| 74 | 74 | |[ICK](../ICK)|2 |★ ☆ ☆ ☆ ☆|**Fail**| |
| 75 | 75 | |[ITPR3](../ITPR3)|2 |★ ☆ ☆ ☆ ☆|**Fail**| |
| 76 | 76 | |[KIFC3](../KIFC3)|2 |★ ☆ ☆ ☆ ☆|**Fail**| |
| 77 | 77 | |[MAP3K6](../MAP3K6)|2 |★ ☆ ☆ ☆ ☆|**Fail**| |
| 78 | 78 | |[MYH10](../MYH10)|2 |★ ☆ ☆ ☆ ☆|**Fail**| |
| 79 | -|[NBEAL1](../NBEAL1)|2 |★ ★ ★ ★ ☆|| |
|
| 80 | -|[NOTCH1](../NOTCH1)|2 |★ ☆ ☆ ☆ ☆|| |
|
| 79 | +|[NBEAL1](../NBEAL1)|2 |★ ★ ★ ★ ☆|**Pass**| |
|
| 80 | +|[NOTCH1](../NOTCH1)|2 |★ ☆ ☆ ☆ ☆|**Fail**| |
|
| 81 | 81 | |[NRXN2](../NRXN2)|2 |★ ☆ ☆ ☆ ☆|**Fail**| |
| 82 | -|[P2RY2](../P2RY2)|2 |★ ★ ★ ★ ☆|| |
|
| 82 | +|[P2RY2](../P2RY2)|2 |★ ★ ★ ★ ☆|**Pass**| |
|
| 83 | 83 | |[PC](../PC)|2 |★ ☆ ☆ ☆ ☆|**Fail**| |
| 84 | 84 | |[POLRMT](../POLRMT)|2 |★ ☆ ☆ ☆ ☆|**Fail**| |
| 85 | 85 | |[POR](../POR)|2 |★ ☆ ☆ ☆ ☆|**Fail**| |
| 86 | 86 | |[PRSS22](../PRSS22)|2 |★ ☆ ☆ ☆ ☆|**Fail**| |
| 87 | 87 | |[PTPRN](../PTPRN)|2 |★ ☆ ☆ ☆ ☆|**Fail**| |
| 88 | -|[RANBP6](../RANBP6)|2 |★ ★ ★ ★ ★|| |
|
| 88 | +|[RANBP6](../RANBP6)|2 |★ ★ ★ ★ ★|**Pass**| |
|
| 89 | 89 | |[RBP3](../RBP3)|2 |★ ☆ ☆ ☆ ☆|**Fail**| |
| 90 | 90 | |[RET](../RET)|2 |★ ☆ ☆ ☆ ☆|**Fail**| |
| 91 | 91 | |[SALL3](../SALL3)|2 |★ ★ ☆ ☆ ☆|**Fail**| |
papers/loveGeneticLandscapeMutations2012.pdf
papers/loveGeneticLandscapeMutations2012_tmp.html
| ... | ... | @@ -0,0 +1,789 @@ |
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|
|
| 338 | +code {
|
|
| 339 | + font-size: 14px;
|
|
| 340 | + line-height: 19px;
|
|
| 341 | +}
|
|
| 342 | +
|
|
| 343 | +/* for inline code */
|
|
| 344 | +:not(pre):not(.hljs) > code {
|
|
| 345 | + color: #C9AE75; /* Change the old color so it seems less like an error */
|
|
| 346 | + font-size: inherit;
|
|
| 347 | +}
|
|
| 348 | +
|
|
| 349 | +/* Page Break : use <div class="page"/> to insert page break
|
|
| 350 | +-------------------------------------------------------- */
|
|
| 351 | +.page {
|
|
| 352 | + page-break-after: always;
|
|
| 353 | +}
|
|
| 354 | + |
|
| 355 | +</style> |
|
| 356 | +
|
|
| 357 | +<script src="https://unpkg.com/mermaid/dist/mermaid.min.js"></script>
|
|
| 358 | +</head>
|
|
| 359 | +<body>
|
|
| 360 | + <script>
|
|
| 361 | + mermaid.initialize({
|
|
| 362 | + startOnLoad: true,
|
|
| 363 | + theme: document.body.classList.contains('vscode-dark') || document.body.classList.contains('vscode-high-contrast')
|
|
| 364 | + ? 'dark'
|
|
| 365 | + : 'default'
|
|
| 366 | + });
|
|
| 367 | + </script>
|
|
| 368 | +<h1 id="lovegeneticlandscapemutations2012">@loveGeneticLandscapeMutations2012</h1> |
|
| 369 | +<h2 id="summary-of-novel-genes">Summary of novel genes</h2> |
|
| 370 | +<table> |
|
| 371 | +<thead> |
|
| 372 | +<tr> |
|
| 373 | +<th style="text-align:center">Entity</th> |
|
| 374 | +<th style="text-align:center">Tier 1 genes</th> |
|
| 375 | +<th style="text-align:center">Tier 2 genes</th> |
|
| 376 | +</tr> |
|
| 377 | +</thead> |
|
| 378 | +<tbody> |
|
| 379 | +<tr> |
|
| 380 | +<td style="text-align:center">BL</td> |
|
| 381 | +<td style="text-align:center">3</td> |
|
| 382 | +<td style="text-align:center">56</td> |
|
| 383 | +</tr> |
|
| 384 | +</tbody> |
|
| 385 | +</table> |
|
| 386 | +<pre><code class="language-mermaid"><div class="mermaid">--- |
|
| 387 | +config: |
|
| 388 | + sankey: |
|
| 389 | + showValues: true |
|
| 390 | + linkColor: target |
|
| 391 | + width: 600 |
|
| 392 | + height: 300 |
|
| 393 | + nodeAlignment: right |
|
| 394 | + prefix: '(' |
|
| 395 | + suffix: ' genes)' |
|
| 396 | +--- |
|
| 397 | +sankey-beta |
|
| 398 | +This study, New Tier 1, 3 |
|
| 399 | +New Tier 1, BL Tier 1, 3 |
|
| 400 | +This study, New Tier 2, 56 |
|
| 401 | +New Tier 2, BL Tier 2, 56 |
|
| 402 | +All other BL studies, BL Tier 1, 26 |
|
| 403 | +All other BL studies, BL Tier 2, 101 |
|
| 404 | +</div></code></pre> |
|
| 405 | +<h2 id="novel-genes-reported-in-this-study">Novel genes reported in this study</h2> |
|
| 406 | +<h3 id="tier-1">Tier 1</h3> |
|
| 407 | +<table> |
|
| 408 | +<thead> |
|
| 409 | +<tr> |
|
| 410 | +<th style="text-align:left">New gene</th> |
|
| 411 | +<th style="text-align:center">BL tier</th> |
|
| 412 | +</tr> |
|
| 413 | +</thead> |
|
| 414 | +<tbody> |
|
| 415 | +<tr> |
|
| 416 | +<td style="text-align:left"><a href="../ARID1A">ARID1A</a></td> |
|
| 417 | +<td style="text-align:center">1</td> |
|
| 418 | +</tr> |
|
| 419 | +<tr> |
|
| 420 | +<td style="text-align:left"><a href="../GNA13">GNA13</a></td> |
|
| 421 | +<td style="text-align:center">1</td> |
|
| 422 | +</tr> |
|
| 423 | +<tr> |
|
| 424 | +<td style="text-align:left"><a href="../PTEN">PTEN</a></td> |
|
| 425 | +<td style="text-align:center">1</td> |
|
| 426 | +</tr> |
|
| 427 | +</tbody> |
|
| 428 | +</table> |
|
| 429 | +<h3 id="tier-2">Tier 2</h3> |
|
| 430 | +<table> |
|
| 431 | +<thead> |
|
| 432 | +<tr> |
|
| 433 | +<th style="text-align:left">Novel gene</th> |
|
| 434 | +<th style="text-align:center">DLBCL tier</th> |
|
| 435 | +<th style="text-align:center">Average variant quality</th> |
|
| 436 | +<th style="text-align:center">QC outcome</th> |
|
| 437 | +</tr> |
|
| 438 | +</thead> |
|
| 439 | +<tbody> |
|
| 440 | +<tr> |
|
| 441 | +<td style="text-align:left"><a href="../ACAD9">ACAD9</a></td> |
|
| 442 | +<td style="text-align:center">2</td> |
|
| 443 | +<td style="text-align:center">★ ☆ ☆ ☆ ☆</td> |
|
| 444 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 445 | +</tr> |
|
| 446 | +<tr> |
|
| 447 | +<td style="text-align:left"><a href="../ACE">ACE</a></td> |
|
| 448 | +<td style="text-align:center">2</td> |
|
| 449 | +<td style="text-align:center">★ ☆ ☆ ☆ ☆</td> |
|
| 450 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 451 | +</tr> |
|
| 452 | +<tr> |
|
| 453 | +<td style="text-align:left"><a href="../ATP2C2">ATP2C2</a></td> |
|
| 454 | +<td style="text-align:center">2</td> |
|
| 455 | +<td style="text-align:center">★ ★ ☆ ☆ ☆</td> |
|
| 456 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 457 | +</tr> |
|
| 458 | +<tr> |
|
| 459 | +<td style="text-align:left"><a href="../BCL6">BCL6</a></td> |
|
| 460 | +<td style="text-align:center">2</td> |
|
| 461 | +<td style="text-align:center">★ ★ ★ ★ ☆</td> |
|
| 462 | +<td style="text-align:center"><strong>Pass</strong></td> |
|
| 463 | +</tr> |
|
| 464 | +<tr> |
|
| 465 | +<td style="text-align:left"><a href="../BRAF">BRAF</a></td> |
|
| 466 | +<td style="text-align:center">2</td> |
|
| 467 | +<td style="text-align:center">★ ☆ ☆ ☆ ☆</td> |
|
| 468 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 469 | +</tr> |
|
| 470 | +<tr> |
|
| 471 | +<td style="text-align:left"><a href="../BRD4">BRD4</a></td> |
|
| 472 | +<td style="text-align:center">2</td> |
|
| 473 | +<td style="text-align:center">★ ☆ ☆ ☆ ☆</td> |
|
| 474 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 475 | +</tr> |
|
| 476 | +<tr> |
|
| 477 | +<td style="text-align:left"><a href="../BTG2">BTG2</a></td> |
|
| 478 | +<td style="text-align:center">2</td> |
|
| 479 | +<td style="text-align:center">★ ☆ ☆ ☆ ☆</td> |
|
| 480 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 481 | +</tr> |
|
| 482 | +<tr> |
|
| 483 | +<td style="text-align:left"><a href="../C6orf27">C6orf27</a></td> |
|
| 484 | +<td style="text-align:center">2</td> |
|
| 485 | +<td style="text-align:center">★ ☆ ☆ ☆ ☆</td> |
|
| 486 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 487 | +</tr> |
|
| 488 | +<tr> |
|
| 489 | +<td style="text-align:left"><a href="../CAD">CAD</a></td> |
|
| 490 | +<td style="text-align:center">2</td> |
|
| 491 | +<td style="text-align:center">★ ☆ ☆ ☆ ☆</td> |
|
| 492 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 493 | +</tr> |
|
| 494 | +<tr> |
|
| 495 | +<td style="text-align:left"><a href="../CARD4">CARD4</a></td> |
|
| 496 | +<td style="text-align:center">2</td> |
|
| 497 | +<td style="text-align:center">★ ★ ★ ★ ☆</td> |
|
| 498 | +<td style="text-align:center"><strong>Pass</strong></td> |
|
| 499 | +</tr> |
|
| 500 | +<tr> |
|
| 501 | +<td style="text-align:left"><a href="../CCT6B">CCT6B</a></td> |
|
| 502 | +<td style="text-align:center">2</td> |
|
| 503 | +<td style="text-align:center"><em>Germline</em></td> |
|
| 504 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 505 | +</tr> |
|
| 506 | +<tr> |
|
| 507 | +<td style="text-align:left"><a href="../CDC73">CDC73</a></td> |
|
| 508 | +<td style="text-align:center">2</td> |
|
| 509 | +<td style="text-align:center">★ ★ ★ ☆ ☆</td> |
|
| 510 | +<td style="text-align:center"><strong>Pass</strong></td> |
|
| 511 | +</tr> |
|
| 512 | +<tr> |
|
| 513 | +<td style="text-align:left"><a href="../CDH17">CDH17</a></td> |
|
| 514 | +<td style="text-align:center">2</td> |
|
| 515 | +<td style="text-align:center">★ ☆ ☆ ☆ ☆</td> |
|
| 516 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 517 | +</tr> |
|
| 518 | +<tr> |
|
| 519 | +<td style="text-align:left"><a href="../COL4A2">COL4A2</a></td> |
|
| 520 | +<td style="text-align:center">2</td> |
|
| 521 | +<td style="text-align:center">★ ☆ ☆ ☆ ☆</td> |
|
| 522 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 523 | +</tr> |
|
| 524 | +<tr> |
|
| 525 | +<td style="text-align:left"><a href="../CREBBP">CREBBP</a></td> |
|
| 526 | +<td style="text-align:center">2</td> |
|
| 527 | +<td style="text-align:center">★ ★ ★ ★ ☆</td> |
|
| 528 | +<td style="text-align:center"></td> |
|
| 529 | +</tr> |
|
| 530 | +<tr> |
|
| 531 | +<td style="text-align:left"><a href="../CYB5D1">CYB5D1</a></td> |
|
| 532 | +<td style="text-align:center">2</td> |
|
| 533 | +<td style="text-align:center">★ ★ ☆ ☆ ☆</td> |
|
| 534 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 535 | +</tr> |
|
| 536 | +<tr> |
|
| 537 | +<td style="text-align:left"><a href="../CYP4F22">CYP4F22</a></td> |
|
| 538 | +<td style="text-align:center">2</td> |
|
| 539 | +<td style="text-align:center">★ ☆ ☆ ☆ ☆</td> |
|
| 540 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 541 | +</tr> |
|
| 542 | +<tr> |
|
| 543 | +<td style="text-align:left"><a href="../DLGAP1">DLGAP1</a></td> |
|
| 544 | +<td style="text-align:center">2</td> |
|
| 545 | +<td style="text-align:center">★ ☆ ☆ ☆ ☆</td> |
|
| 546 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 547 | +</tr> |
|
| 548 | +<tr> |
|
| 549 | +<td style="text-align:left"><a href="../DTX1">DTX1</a></td> |
|
| 550 | +<td style="text-align:center">2</td> |
|
| 551 | +<td style="text-align:center">★ ☆ ☆ ☆ ☆</td> |
|
| 552 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 553 | +</tr> |
|
| 554 | +<tr> |
|
| 555 | +<td style="text-align:left"><a href="../EIF2C4">EIF2C4</a></td> |
|
| 556 | +<td style="text-align:center">2</td> |
|
| 557 | +<td style="text-align:center">★ ☆ ☆ ☆ ☆</td> |
|
| 558 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 559 | +</tr> |
|
| 560 | +<tr> |
|
| 561 | +<td style="text-align:left"><a href="../EML2">EML2</a></td> |
|
| 562 | +<td style="text-align:center">2</td> |
|
| 563 | +<td style="text-align:center">★ ☆ ☆ ☆ ☆</td> |
|
| 564 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 565 | +</tr> |
|
| 566 | +<tr> |
|
| 567 | +<td style="text-align:left"><a href="../ENTPD3">ENTPD3</a></td> |
|
| 568 | +<td style="text-align:center">2</td> |
|
| 569 | +<td style="text-align:center">★ ★ ☆ ☆ ☆</td> |
|
| 570 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 571 | +</tr> |
|
| 572 | +<tr> |
|
| 573 | +<td style="text-align:left"><a href="../EPHB2">EPHB2</a></td> |
|
| 574 | +<td style="text-align:center">2</td> |
|
| 575 | +<td style="text-align:center">★ ★ ☆ ☆ ☆</td> |
|
| 576 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 577 | +</tr> |
|
| 578 | +<tr> |
|
| 579 | +<td style="text-align:left"><a href="../EZH2">EZH2</a></td> |
|
| 580 | +<td style="text-align:center">2</td> |
|
| 581 | +<td style="text-align:center">★ ★ ★ ★ ★</td> |
|
| 582 | +<td style="text-align:center"><strong>Pass</strong></td> |
|
| 583 | +</tr> |
|
| 584 | +<tr> |
|
| 585 | +<td style="text-align:left"><a href="../FAM129B">FAM129B</a></td> |
|
| 586 | +<td style="text-align:center">2</td> |
|
| 587 | +<td style="text-align:center">★ ★ ☆ ☆ ☆</td> |
|
| 588 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 589 | +</tr> |
|
| 590 | +<tr> |
|
| 591 | +<td style="text-align:left"><a href="../FGFR3">FGFR3</a></td> |
|
| 592 | +<td style="text-align:center">2</td> |
|
| 593 | +<td style="text-align:center">★ ☆ ☆ ☆ ☆</td> |
|
| 594 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 595 | +</tr> |
|
| 596 | +<tr> |
|
| 597 | +<td style="text-align:left"><a href="../FTCD">FTCD</a></td> |
|
| 598 | +<td style="text-align:center">2</td> |
|
| 599 | +<td style="text-align:center"><em>Germline</em></td> |
|
| 600 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 601 | +</tr> |
|
| 602 | +<tr> |
|
| 603 | +<td style="text-align:left"><a href="../GGTLA4">GGTLA4</a></td> |
|
| 604 | +<td style="text-align:center">2</td> |
|
| 605 | +<td style="text-align:center">★ ★ ★ ★ ☆</td> |
|
| 606 | +<td style="text-align:center"><strong>Pass</strong></td> |
|
| 607 | +</tr> |
|
| 608 | +<tr> |
|
| 609 | +<td style="text-align:left"><a href="../GRIK5">GRIK5</a></td> |
|
| 610 | +<td style="text-align:center">2</td> |
|
| 611 | +<td style="text-align:center">★ ☆ ☆ ☆ ☆</td> |
|
| 612 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 613 | +</tr> |
|
| 614 | +<tr> |
|
| 615 | +<td style="text-align:left"><a href="../ICK">ICK</a></td> |
|
| 616 | +<td style="text-align:center">2</td> |
|
| 617 | +<td style="text-align:center">★ ☆ ☆ ☆ ☆</td> |
|
| 618 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 619 | +</tr> |
|
| 620 | +<tr> |
|
| 621 | +<td style="text-align:left"><a href="../ITPR3">ITPR3</a></td> |
|
| 622 | +<td style="text-align:center">2</td> |
|
| 623 | +<td style="text-align:center">★ ☆ ☆ ☆ ☆</td> |
|
| 624 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 625 | +</tr> |
|
| 626 | +<tr> |
|
| 627 | +<td style="text-align:left"><a href="../KIFC3">KIFC3</a></td> |
|
| 628 | +<td style="text-align:center">2</td> |
|
| 629 | +<td style="text-align:center">★ ☆ ☆ ☆ ☆</td> |
|
| 630 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 631 | +</tr> |
|
| 632 | +<tr> |
|
| 633 | +<td style="text-align:left"><a href="../MAP3K6">MAP3K6</a></td> |
|
| 634 | +<td style="text-align:center">2</td> |
|
| 635 | +<td style="text-align:center">★ ☆ ☆ ☆ ☆</td> |
|
| 636 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 637 | +</tr> |
|
| 638 | +<tr> |
|
| 639 | +<td style="text-align:left"><a href="../MYH10">MYH10</a></td> |
|
| 640 | +<td style="text-align:center">2</td> |
|
| 641 | +<td style="text-align:center">★ ☆ ☆ ☆ ☆</td> |
|
| 642 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 643 | +</tr> |
|
| 644 | +<tr> |
|
| 645 | +<td style="text-align:left"><a href="../NBEAL1">NBEAL1</a></td> |
|
| 646 | +<td style="text-align:center">2</td> |
|
| 647 | +<td style="text-align:center">★ ★ ★ ★ ☆</td> |
|
| 648 | +<td style="text-align:center"><strong>Pass</strong></td> |
|
| 649 | +</tr> |
|
| 650 | +<tr> |
|
| 651 | +<td style="text-align:left"><a href="../NOTCH1">NOTCH1</a></td> |
|
| 652 | +<td style="text-align:center">2</td> |
|
| 653 | +<td style="text-align:center">★ ☆ ☆ ☆ ☆</td> |
|
| 654 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 655 | +</tr> |
|
| 656 | +<tr> |
|
| 657 | +<td style="text-align:left"><a href="../NRXN2">NRXN2</a></td> |
|
| 658 | +<td style="text-align:center">2</td> |
|
| 659 | +<td style="text-align:center">★ ☆ ☆ ☆ ☆</td> |
|
| 660 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 661 | +</tr> |
|
| 662 | +<tr> |
|
| 663 | +<td style="text-align:left"><a href="../P2RY2">P2RY2</a></td> |
|
| 664 | +<td style="text-align:center">2</td> |
|
| 665 | +<td style="text-align:center">★ ★ ★ ★ ☆</td> |
|
| 666 | +<td style="text-align:center"><strong>Pass</strong></td> |
|
| 667 | +</tr> |
|
| 668 | +<tr> |
|
| 669 | +<td style="text-align:left"><a href="../PC">PC</a></td> |
|
| 670 | +<td style="text-align:center">2</td> |
|
| 671 | +<td style="text-align:center">★ ☆ ☆ ☆ ☆</td> |
|
| 672 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 673 | +</tr> |
|
| 674 | +<tr> |
|
| 675 | +<td style="text-align:left"><a href="../POLRMT">POLRMT</a></td> |
|
| 676 | +<td style="text-align:center">2</td> |
|
| 677 | +<td style="text-align:center">★ ☆ ☆ ☆ ☆</td> |
|
| 678 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 679 | +</tr> |
|
| 680 | +<tr> |
|
| 681 | +<td style="text-align:left"><a href="../POR">POR</a></td> |
|
| 682 | +<td style="text-align:center">2</td> |
|
| 683 | +<td style="text-align:center">★ ☆ ☆ ☆ ☆</td> |
|
| 684 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 685 | +</tr> |
|
| 686 | +<tr> |
|
| 687 | +<td style="text-align:left"><a href="../PRSS22">PRSS22</a></td> |
|
| 688 | +<td style="text-align:center">2</td> |
|
| 689 | +<td style="text-align:center">★ ☆ ☆ ☆ ☆</td> |
|
| 690 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 691 | +</tr> |
|
| 692 | +<tr> |
|
| 693 | +<td style="text-align:left"><a href="../PTPRN">PTPRN</a></td> |
|
| 694 | +<td style="text-align:center">2</td> |
|
| 695 | +<td style="text-align:center">★ ☆ ☆ ☆ ☆</td> |
|
| 696 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 697 | +</tr> |
|
| 698 | +<tr> |
|
| 699 | +<td style="text-align:left"><a href="../RANBP6">RANBP6</a></td> |
|
| 700 | +<td style="text-align:center">2</td> |
|
| 701 | +<td style="text-align:center">★ ★ ★ ★ ★</td> |
|
| 702 | +<td style="text-align:center"><strong>Pass</strong></td> |
|
| 703 | +</tr> |
|
| 704 | +<tr> |
|
| 705 | +<td style="text-align:left"><a href="../RBP3">RBP3</a></td> |
|
| 706 | +<td style="text-align:center">2</td> |
|
| 707 | +<td style="text-align:center">★ ☆ ☆ ☆ ☆</td> |
|
| 708 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 709 | +</tr> |
|
| 710 | +<tr> |
|
| 711 | +<td style="text-align:left"><a href="../RET">RET</a></td> |
|
| 712 | +<td style="text-align:center">2</td> |
|
| 713 | +<td style="text-align:center">★ ☆ ☆ ☆ ☆</td> |
|
| 714 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 715 | +</tr> |
|
| 716 | +<tr> |
|
| 717 | +<td style="text-align:left"><a href="../SALL3">SALL3</a></td> |
|
| 718 | +<td style="text-align:center">2</td> |
|
| 719 | +<td style="text-align:center">★ ★ ☆ ☆ ☆</td> |
|
| 720 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 721 | +</tr> |
|
| 722 | +<tr> |
|
| 723 | +<td style="text-align:left"><a href="../SAPS2">SAPS2</a></td> |
|
| 724 | +<td style="text-align:center">2</td> |
|
| 725 | +<td style="text-align:center">★ ☆ ☆ ☆ ☆</td> |
|
| 726 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 727 | +</tr> |
|
| 728 | +<tr> |
|
| 729 | +<td style="text-align:left"><a href="../SBF1">SBF1</a></td> |
|
| 730 | +<td style="text-align:center">2</td> |
|
| 731 | +<td style="text-align:center">★ ★ ☆ ☆ ☆</td> |
|
| 732 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 733 | +</tr> |
|
| 734 | +<tr> |
|
| 735 | +<td style="text-align:left"><a href="../SF3B1">SF3B1</a></td> |
|
| 736 | +<td style="text-align:center">2</td> |
|
| 737 | +<td style="text-align:center">★ ★ ★ ★ ☆</td> |
|
| 738 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 739 | +</tr> |
|
| 740 | +<tr> |
|
| 741 | +<td style="text-align:left"><a href="../SHANK1">SHANK1</a></td> |
|
| 742 | +<td style="text-align:center">2</td> |
|
| 743 | +<td style="text-align:center">★ ☆ ☆ ☆ ☆</td> |
|
| 744 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 745 | +</tr> |
|
| 746 | +<tr> |
|
| 747 | +<td style="text-align:left"><a href="../SLC29A2">SLC29A2</a></td> |
|
| 748 | +<td style="text-align:center">2</td> |
|
| 749 | +<td style="text-align:center">★ ☆ ☆ ☆ ☆</td> |
|
| 750 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 751 | +</tr> |
|
| 752 | +<tr> |
|
| 753 | +<td style="text-align:left"><a href="../SYNGAP1">SYNGAP1</a></td> |
|
| 754 | +<td style="text-align:center">2</td> |
|
| 755 | +<td style="text-align:center">★ ☆ ☆ ☆ ☆</td> |
|
| 756 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 757 | +</tr> |
|
| 758 | +<tr> |
|
| 759 | +<td style="text-align:left"><a href="../TBC1D9B">TBC1D9B</a></td> |
|
| 760 | +<td style="text-align:center">2</td> |
|
| 761 | +<td style="text-align:center">★ ☆ ☆ ☆ ☆</td> |
|
| 762 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 763 | +</tr> |
|
| 764 | +<tr> |
|
| 765 | +<td style="text-align:left"><a href="../TIGD6">TIGD6</a></td> |
|
| 766 | +<td style="text-align:center">2</td> |
|
| 767 | +<td style="text-align:center">★ ☆ ☆ ☆ ☆</td> |
|
| 768 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 769 | +</tr> |
|
| 770 | +<tr> |
|
| 771 | +<td style="text-align:left"><a href="../TPST2">TPST2</a></td> |
|
| 772 | +<td style="text-align:center">2</td> |
|
| 773 | +<td style="text-align:center">☆ ☆ ☆ ☆ ☆</td> |
|
| 774 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 775 | +</tr> |
|
| 776 | +<tr> |
|
| 777 | +<td style="text-align:left"><a href="../ZNF229">ZNF229</a></td> |
|
| 778 | +<td style="text-align:center">2</td> |
|
| 779 | +<td style="text-align:center"><em>Germline</em></td> |
|
| 780 | +<td style="text-align:center"><strong>Fail</strong></td> |
|
| 781 | +</tr> |
|
| 782 | +</tbody> |
|
| 783 | +</table> |
|
| 784 | +<h2 id="see-also">See Also</h2> |
|
| 785 | +<p>The primary data supporting each of the mutations reported in this study can be viewed in <a href="https://www.bcgsc.ca/downloads/morinlab/GAMBL/Love/">IGV reports</a></p> |
|
| 786 | +<h1 id="details">Details</h1> |
|
| 787 | +
|
|
| 788 | +</body>
|
|
| 789 | +</html>
|