BCL2.md
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@@ -34,6 +34,8 @@ timeline
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## Mutation incidence in large patient cohorts (GAMBL reanalysis)
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[[include:DLBCL_BCL2.md]]
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+[[include:FL_BCL2.md]]
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+
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## Mutation pattern and selective pressure estimates
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FL_BCL2.md
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+<table class="table" style="margin-left: auto; margin-right: auto;">
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+ <thead>
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+ <tr>
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+ <th style="text-align:left;"> pathology </th>
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+ <th style="text-align:left;"> Samples </th>
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+ <th style="text-align:right;"> Incidence </th>
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+ <th style="text-align:left;"> CI </th>
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+ </tr>
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+ </thead>
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+<tbody>
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+ <tr>
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+ <td style="text-align:left;color: rgba(255, 255, 255, 255) !important;background-color: rgba(157, 11, 21, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> FL </td>
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+ <td style="text-align:left;color: rgba(255, 255, 255, 255) !important;background-color: rgba(157, 11, 21, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> GAMBL without Crouch </td>
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+ <td style="text-align:right;color: rgba(255, 255, 255, 255) !important;background-color: rgba(157, 11, 21, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> <span style=" color: rgba(255, 255, 255, 255) !important;border-radius: 4px; padding-right: 4px; padding-left: 4px; background-color: rgba(157, 11, 21, 255) !important;">0.4350</span> </td>
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+ <td style="text-align:left;color: rgba(255, 255, 255, 255) !important;background-color: rgba(157, 11, 21, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> [0.3968,0.4733] </td>
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+ </tr>
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+ <tr>
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+ <td style="text-align:left;color: rgba(255, 255, 255, 255) !important;background-color: rgba(140, 6, 19, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> FL </td>
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+ <td style="text-align:left;color: rgba(255, 255, 255, 255) !important;background-color: rgba(140, 6, 19, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> GAMBL with Crouch </td>
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+ <td style="text-align:right;color: rgba(255, 255, 255, 255) !important;background-color: rgba(140, 6, 19, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> <span style=" color: rgba(255, 255, 255, 255) !important;border-radius: 4px; padding-right: 4px; padding-left: 4px; background-color: rgba(140, 6, 19, 255) !important;">0.4542</span> </td>
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+ <td style="text-align:left;color: rgba(255, 255, 255, 255) !important;background-color: rgba(140, 6, 19, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> [0.426,0.4824] </td>
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+ </tr>
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+ <tr>
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+ <td style="text-align:left;color: rgba(255, 255, 255, 255) !important;background-color: rgba(115, 2, 15, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> FL </td>
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+ <td style="text-align:left;color: rgba(255, 255, 255, 255) !important;background-color: rgba(115, 2, 15, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> BC </td>
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+ <td style="text-align:right;color: rgba(255, 255, 255, 255) !important;background-color: rgba(115, 2, 15, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> <span style=" color: rgba(255, 255, 255, 255) !important;border-radius: 4px; padding-right: 4px; padding-left: 4px; background-color: rgba(115, 2, 15, 255) !important;">0.4853</span> </td>
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+ <td style="text-align:left;color: rgba(255, 255, 255, 255) !important;background-color: rgba(115, 2, 15, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> [0.4345,0.536] </td>
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+ </tr>
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+ <tr>
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+ <td style="text-align:left;color: rgba(255, 255, 255, 255) !important;background-color: rgba(198, 32, 30, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> FL </td>
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+ <td style="text-align:left;color: rgba(255, 255, 255, 255) !important;background-color: rgba(198, 32, 30, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> Kalmbach </td>
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+ <td style="text-align:right;color: rgba(255, 255, 255, 255) !important;background-color: rgba(198, 32, 30, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> <span style=" color: rgba(255, 255, 255, 255) !important;border-radius: 4px; padding-right: 4px; padding-left: 4px; background-color: rgba(198, 32, 30, 255) !important;">0.3780</span> </td>
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+ <td style="text-align:left;color: rgba(255, 255, 255, 255) !important;background-color: rgba(198, 32, 30, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> [0.3038,0.4523] </td>
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+ </tr>
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+ <tr>
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+ <td style="text-align:left;color: rgba(255, 255, 255, 255) !important;background-color: rgba(121, 3, 17, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> FL </td>
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+ <td style="text-align:left;color: rgba(255, 255, 255, 255) !important;background-color: rgba(121, 3, 17, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> Crouch </td>
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+ <td style="text-align:right;color: rgba(255, 255, 255, 255) !important;background-color: rgba(121, 3, 17, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> <span style=" color: rgba(255, 255, 255, 255) !important;border-radius: 4px; padding-right: 4px; padding-left: 4px; background-color: rgba(121, 3, 17, 255) !important;">0.4771</span> </td>
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+ <td style="text-align:left;color: rgba(255, 255, 255, 255) !important;background-color: rgba(121, 3, 17, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> [0.4353,0.519] </td>
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+ </tr>
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+ <tr>
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+ <td style="text-align:left;color: rgba(255, 255, 255, 255) !important;background-color: rgba(211, 45, 36, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> FL </td>
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+ <td style="text-align:left;color: rgba(255, 255, 255, 255) !important;background-color: rgba(211, 45, 36, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> FL_ICGC </td>
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+ <td style="text-align:right;color: rgba(255, 255, 255, 255) !important;background-color: rgba(211, 45, 36, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> <span style=" color: rgba(255, 255, 255, 255) !important;border-radius: 4px; padding-right: 4px; padding-left: 4px; background-color: rgba(211, 45, 36, 255) !important;">0.3535</span> </td>
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+ <td style="text-align:left;color: rgba(255, 255, 255, 255) !important;background-color: rgba(211, 45, 36, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> [0.2594,0.4477] </td>
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+ </tr>
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+</tbody>
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+</table>
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