c6d187ee491d35a2128d101de90fecf954f07f80
BL_genes.md
| ... | ... | @@ -15,114 +15,106 @@ link-citations: true |
| 15 | 15 | |
| 16 | 16 | |Gene|Tier| First BL evidence | Other entities | |
| 17 | 17 | |:-:|:-:|:--|:-| |
| 18 | -|[ARID1A](ARID1A)|1|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|[@zhangGeneticHeterogeneityDiffuse2013; @krysiakRecurrentSomaticMutations2017b; @rossiCodingGenomeSplenic2012c; @wienandGenomicAnalysesFlowsorted2019b]| |
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| 19 | -|[BCL7A](BCL7A)|1, aSHM|[Grande et al](papers/grandeGenomewideDiscoverySomatic2019)[@grandeGenomewideDiscoverySomatic2019]|[@arthurGenomewideDiscoverySomatic2018; @krysiakRecurrentSomaticMutations2017b; @reichelFlowSortingExome2015a]| |
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| 18 | +|[ARID1A](ARID1A)|1|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|[@wienandGenomicAnalysesFlowsorted2019b; @zhangGeneticHeterogeneityDiffuse2013; @krysiakRecurrentSomaticMutations2017b; @rossiCodingGenomeSplenic2012c]| |
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| 19 | +|[BCL7A](BCL7A)|1|[Grande et al](papers/grandeGenomewideDiscoverySomatic2019)[@grandeGenomewideDiscoverySomatic2019]|[@zhangGeneticHeterogeneityDiffuse2013; @krysiakRecurrentSomaticMutations2017b; @reichelFlowSortingExome2015a]| |
|
| 20 | 20 | |[BMP7](BMP7)|1|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|| |
| 21 | -|[CCND3](CCND3)|1-EE|[Richter et al](papers/richterRecurrentMutationID32012a)[@richterRecurrentMutationID32012a]|[@morinFrequentMutationHistonemodifying2011; @deschGenotypingCirculatingTumor2020; @jalladesExomeSequencingIdentifies2017]| |
|
| 22 | -|[CHD8](CHD8)|1|[Grande et al](papers/grandeGenomewideDiscoverySomatic2019)[@grandeGenomewideDiscoverySomatic2019]|[@reddyGeneticFunctionalDrivers2017]| |
|
| 21 | +|[CCND3](CCND3)|1|[Richter et al](papers/richterRecurrentMutationID32012a)[@richterRecurrentMutationID32012a]|[@jalladesExomeSequencingIdentifies2017; @deschGenotypingCirculatingTumor2020; @morinFrequentMutationHistonemodifying2011]| |
|
| 22 | +|[CHD8](CHD8)|1|[Grande et al](papers/grandeGenomewideDiscoverySomatic2019)[@grandeGenomewideDiscoverySomatic2019]|| |
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| 23 | 23 | |[DDX3X](DDX3X)|1|[Schmitz et al](papers/schmitzBurkittLymphomaPathogenesis2012)[@schmitzBurkittLymphomaPathogenesis2012]|[@schmitzGeneticsPathogenesisDiffuse2018a; @mottokIntegrativeGenomicAnalysis2019b]| |
| 24 | 24 | |[EIF4A1](EIF4A1)|1|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|| |
| 25 | 25 | |[EPPK1](EPPK1)|1|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|| |
| 26 | -|[FBXO11](FBXO11)|1|[Richter et al](papers/richterRecurrentMutationID32012a)[@richterRecurrentMutationID32012a]|[@hubschmannMutationalMechanismsShaping2021b; @parryWholeExomeSequencing2013]| |
|
| 27 | -|[FOXO1](FOXO1)|1|[Schmitz et al](papers/schmitzBurkittLymphomaPathogenesis2012)[@schmitzBurkittLymphomaPathogenesis2012]|[@dunsCharacterizationDLBCLPMBL2021b; @morinFrequentMutationHistonemodifying2011]| |
|
| 26 | +|[FBXO11](FBXO11)|1|[Richter et al](papers/richterRecurrentMutationID32012a)[@richterRecurrentMutationID32012a]|[@parryWholeExomeSequencing2013; @hubschmannMutationalMechanismsShaping2021b]| |
|
| 27 | +|[FOXO1](FOXO1)|1|[Schmitz et al](papers/schmitzBurkittLymphomaPathogenesis2012)[@schmitzBurkittLymphomaPathogenesis2012]|[@morinFrequentMutationHistonemodifying2011; @dunsCharacterizationDLBCLPMBL2021b]| |
|
| 28 | 28 | |[GNA13](GNA13)|1|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|[@reichelFlowSortingExome2015a; @morinFrequentMutationHistonemodifying2011]| |
| 29 | 29 | |[GNAI2](GNAI2)|1|[Grande et al](papers/grandeGenomewideDiscoverySomatic2019)[@grandeGenomewideDiscoverySomatic2019]|[@morinMutationalStructuralAnalysis2013]| |
| 30 | -|[HNRNPU](HNRNPU)|1, aSHM|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|[@reddyGeneticFunctionalDrivers2017]| |
|
| 30 | +|[HNRNPU](HNRNPU)|1|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|[@reddyGeneticFunctionalDrivers2017]| |
|
| 31 | 31 | |[ID3](ID3)|1|[Richter et al](papers/richterRecurrentMutationID32012a)[@richterRecurrentMutationID32012a]|[@spinaGeneticsNodalMarginal2016b; @schmitzBurkittLymphomaPathogenesis2012]| |
| 32 | -|[KMT2D](KMT2D)|1|[Grande et al](papers/grandeGenomewideDiscoverySomatic2019)[@grandeGenomewideDiscoverySomatic2019]|[@rossiCodingGenomeSplenic2012c; @deschGenotypingCirculatingTumor2020; @beaLandscapeSomaticMutations2013; @morinFrequentMutationHistonemodifying2011]| |
|
| 33 | -|[MYC](MYC)|1, aSHM|[Johnston et al](papers/johnstonCmycHypermutationBurkitt1992)[@johnstonCmycHypermutationBurkitt1992]|[@pasqualucciHypermutationMultipleProtooncogenes2001a; @jalladesExomeSequencingIdentifies2017; @dunsCharacterizationDLBCLPMBL2021b]| |
|
| 32 | +|[KMT2D](KMT2D)|1|[Grande et al](papers/grandeGenomewideDiscoverySomatic2019)[@grandeGenomewideDiscoverySomatic2019]|[@morinFrequentMutationHistonemodifying2011; @deschGenotypingCirculatingTumor2020; @beaLandscapeSomaticMutations2013; @rossiCodingGenomeSplenic2012c]| |
|
| 33 | +|[MYC](MYC)|1|[Johnston et al](papers/johnstonCmycHypermutationBurkitt1992)[@johnstonCmycHypermutationBurkitt1992]|[@jalladesExomeSequencingIdentifies2017; @pasqualucciHypermutationMultipleProtooncogenes2001a; @dunsCharacterizationDLBCLPMBL2021b]| |
|
| 34 | 34 | |[P2RY8](P2RY8)|1|[Muppidi et al](papers/muppidiLossSignalingGa132014b)[@muppidiLossSignalingGa132014b]|[@lohrDiscoveryPrioritizationSomatic2012a]| |
| 35 | 35 | |[PHF6](PHF6)|1|[Thomas et al](papers/thomasGeneticSubgroupsInform2023)[@thomasGeneticSubgroupsInform2023]|[@reddyGeneticFunctionalDrivers2017]| |
| 36 | 36 | |[PTEN](PTEN)|1|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|| |
| 37 | 37 | |[RFX7](RFX7)|1|[Grande et al](papers/grandeGenomewideDiscoverySomatic2019)[@grandeGenomewideDiscoverySomatic2019]|| |
| 38 | -|[RHOA](RHOA)|1|[Richter et al](papers/richterRecurrentMutationID32012a)[@richterRecurrentMutationID32012a]|| |
|
| 38 | +|[RHOA](RHOA)|1|[Richter et al](papers/richterRecurrentMutationID32012a)[@richterRecurrentMutationID32012a]|[@zhangGeneticHeterogeneityDiffuse2013]| |
|
| 39 | 39 | |[SIN3A](SIN3A)|1|[Grande et al](papers/grandeGenomewideDiscoverySomatic2019)[@grandeGenomewideDiscoverySomatic2019]|[@rossiCodingGenomeSplenic2012c]| |
| 40 | -|[SMARCA4](SMARCA4)|1-EE|[Richter et al](papers/richterRecurrentMutationID32012a)[@richterRecurrentMutationID32012a]|[@lohrDiscoveryPrioritizationSomatic2012a; @krysiakRecurrentSomaticMutations2017b; @nadeuGenomicEpigenomicInsights2020b]| |
|
| 40 | +|[SMARCA4](SMARCA4)|1|[Richter et al](papers/richterRecurrentMutationID32012a)[@richterRecurrentMutationID32012a]|[@krysiakRecurrentSomaticMutations2017b; @nadeuGenomicEpigenomicInsights2020b; @lohrDiscoveryPrioritizationSomatic2012a]| |
|
| 41 | 41 | |[TCF3](TCF3)|1|[Schmitz et al](papers/schmitzBurkittLymphomaPathogenesis2012)[@schmitzBurkittLymphomaPathogenesis2012]|| |
| 42 | -|[TCL1A](TCL1A)|1, aSHM|[Grande et al](papers/grandeGenomewideDiscoverySomatic2019)[@grandeGenomewideDiscoverySomatic2019]|| |
|
| 42 | +|[TCL1A](TCL1A)|1|[Grande et al](papers/grandeGenomewideDiscoverySomatic2019)[@grandeGenomewideDiscoverySomatic2019]|| |
|
| 43 | 43 | |[TFAP4](TFAP4)|1|[Grande et al](papers/grandeGenomewideDiscoverySomatic2019)[@grandeGenomewideDiscoverySomatic2019]|| |
| 44 | -|[TP53](TP53)|1|[Wilda et al](papers/wildaInactivationARFMDM2p53Pathway2004)[@wildaInactivationARFMDM2p53Pathway2004]|[@tiacciPervasiveMutationsJAKSTAT2018b; @rossiCodingGenomeSplenic2012c; @lohrDiscoveryPrioritizationSomatic2012a; @morinFrequentMutationHistonemodifying2011; @beaLandscapeSomaticMutations2013]| |
|
| 44 | +|[TP53](TP53)|1|[Wilda et al](papers/wildaInactivationARFMDM2p53Pathway2004)[@wildaInactivationARFMDM2p53Pathway2004]|[@morinFrequentMutationHistonemodifying2011; @beaLandscapeSomaticMutations2013; @tiacciPervasiveMutationsJAKSTAT2018b; @rossiCodingGenomeSplenic2012c; @lohrDiscoveryPrioritizationSomatic2012a]| |
|
| 45 | 45 | |[USP7](USP7)|1|[Grande et al](papers/grandeGenomewideDiscoverySomatic2019)[@grandeGenomewideDiscoverySomatic2019]|| |
| 46 | -|[WNK1](WNK1)|1|[Thomas et al](papers/thomasGeneticSubgroupsInform2023)[@thomasGeneticSubgroupsInform2023]|[@hubschmannMutationalMechanismsShaping2021b; @jalladesExomeSequencingIdentifies2017]| |
|
| 46 | +|[WNK1](WNK1)|1|[Thomas et al](papers/thomasGeneticSubgroupsInform2023)[@thomasGeneticSubgroupsInform2023]|[@jalladesExomeSequencingIdentifies2017; @hubschmannMutationalMechanismsShaping2021b]| |
|
| 47 | 47 | |
| 48 | 48 | ## Tier 2 BL genes |
| 49 | 49 | |
| 50 | -### *152 total* |
|
| 50 | +### *75 total* |
|
| 51 | 51 | |
| 52 | -### This includes *70 genes failed QC (2-F) |
|
| 53 | 52 | |Gene|Tier| First BL evidence | Other entities | |
| 54 | 53 | |:-:|:-:|:--|:-| |
| 55 | 54 | |[ADAMTS5](ADAMTS5)|2|[Burkhardt et al](papers/burkhardtClinicalRelevanceMolecular2022b)[@burkhardtClinicalRelevanceMolecular2022b]|| |
| 56 | 55 | |[ADNP](ADNP)|2|[Burkhardt et al](papers/burkhardtClinicalRelevanceMolecular2022b)[@burkhardtClinicalRelevanceMolecular2022b]|| |
| 57 | 56 | |[AGO4](AGO4)|2|[Burkhardt et al](papers/burkhardtClinicalRelevanceMolecular2022b)[@burkhardtClinicalRelevanceMolecular2022b]|| |
| 58 | 57 | |[ARHGEF1](ARHGEF1)|2|[Muppidi et al](papers/muppidiLossSignalingGa132014b)[@muppidiLossSignalingGa132014b]|| |
| 59 | -|[BACH2](BACH2)|2, aSHM|[Grande et al](papers/grandeGenomewideDiscoverySomatic2019)[@grandeGenomewideDiscoverySomatic2019]|| |
|
| 60 | -|[BCL2](BCL2)|2, aSHM|[Burkhardt et al](papers/burkhardtClinicalRelevanceMolecular2022b)[@burkhardtClinicalRelevanceMolecular2022b]|[@sarkozyMutationalLandscapeGray2021a; @morinFrequentMutationHistonemodifying2011; @tanakaFrequentIncidenceSomatic1992]| |
|
| 61 | -|[BCL6](BCL6)|2, aSHM|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|[@morinFrequentMutationHistonemodifying2011]| |
|
| 62 | -|[BTG1](BTG1)|2, aSHM|[Burkhardt et al](papers/burkhardtClinicalRelevanceMolecular2022b)[@burkhardtClinicalRelevanceMolecular2022b]|[@sarkozyMutationalLandscapeGray2021a; @morinFrequentMutationHistonemodifying2011]| |
|
| 58 | +|[BACH2](BACH2)|2|[Grande et al](papers/grandeGenomewideDiscoverySomatic2019)[@grandeGenomewideDiscoverySomatic2019]|| |
|
| 59 | +|[BCL2](BCL2)|2|[Burkhardt et al](papers/burkhardtClinicalRelevanceMolecular2022b)[@burkhardtClinicalRelevanceMolecular2022b]|[@tanakaFrequentIncidenceSomatic1992; @sarkozyMutationalLandscapeGray2021a; @morinFrequentMutationHistonemodifying2011]| |
|
| 60 | +|[BCL6](BCL6)|2|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|[@morinFrequentMutationHistonemodifying2011]| |
|
| 61 | +|[BTG1](BTG1)|2|[Burkhardt et al](papers/burkhardtClinicalRelevanceMolecular2022b)[@burkhardtClinicalRelevanceMolecular2022b]|[@morinFrequentMutationHistonemodifying2011; @sarkozyMutationalLandscapeGray2021a]| |
|
| 63 | 62 | |[C16orf48](C16orf48)|2|[Schmitz et al](papers/schmitzBurkittLymphomaPathogenesis2012)[@schmitzBurkittLymphomaPathogenesis2012]|| |
| 64 | -|[CARD11](CARD11)|2|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|[@wuGeneticHeterogeneityPrimary2016; @lenzOncogenicCARD11Mutations2008; @yanBCRTLRSignaling2012a; @morinFrequentMutationHistonemodifying2011]| |
|
| 65 | 63 | |[CARD4](CARD4)|2|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|| |
| 66 | -|[CCNF](CCNF)|2|[Abate et al](papers/abateDistinctViralMutational2015a)[@abateDistinctViralMutational2015a]|| |
|
| 64 | +|[CCNF](CCNF)|2|[Abate et al](papers/abateDistinctViralMutational2015a)[@abateDistinctViralMutational2015a]|[@zhangGeneticHeterogeneityDiffuse2013]| |
|
| 67 | 65 | |[CD79A](CD79A)|2|[Burkhardt et al](papers/burkhardtClinicalRelevanceMolecular2022b)[@burkhardtClinicalRelevanceMolecular2022b]|[@rossiCodingGenomeSplenic2012c]| |
| 68 | -|[CD83](CD83)|2, aSHM|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|[@morinMutationalStructuralAnalysis2013; @dunsCharacterizationDLBCLPMBL2021b; @russler-germainMutationsAssociatedProgression2023b]| |
|
| 66 | +|[CD83](CD83)|2|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|[@dunsCharacterizationDLBCLPMBL2021b; @russler-germainMutationsAssociatedProgression2023b; @morinMutationalStructuralAnalysis2013]| |
|
| 69 | 67 | |[CDC73](CDC73)|2|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|[@reddyGeneticFunctionalDrivers2017]| |
| 70 | 68 | |[CDKN2A](CDKN2A)|2|[Grande et al](papers/grandeGenomewideDiscoverySomatic2019)[@grandeGenomewideDiscoverySomatic2019]|[@morinMutationalStructuralAnalysis2013; @spinaGeneticsNodalMarginal2016b]| |
| 71 | 69 | |[CDKN2C](CDKN2C)|2|[Thomas et al](papers/thomasGeneticSubgroupsInform2023)[@thomasGeneticSubgroupsInform2023]|| |
| 72 | 70 | |[CHD4](CHD4)|2|[Burkhardt et al](papers/burkhardtClinicalRelevanceMolecular2022b)[@burkhardtClinicalRelevanceMolecular2022b]|| |
| 73 | 71 | |[CPXM2](CPXM2)|2|[Burkhardt et al](papers/burkhardtClinicalRelevanceMolecular2022b)[@burkhardtClinicalRelevanceMolecular2022b]|| |
| 74 | -|[CREBBP](CREBBP)|2|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|[@parryWholeExomeSequencing2013; @dunsCharacterizationDLBCLPMBL2021b; @pasqualucciInactivatingMutationsAcetyltransferase2011a]| |
|
| 75 | -|[CXCR4](CXCR4)|2, aSHM|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|[@krysiakRecurrentSomaticMutations2017b; @khodabakhshiRecurrentTargetsAberrant2012]| |
|
| 72 | +|[CREBBP](CREBBP)|2|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|[@dunsCharacterizationDLBCLPMBL2021b; @pasqualucciInactivatingMutationsAcetyltransferase2011a; @parryWholeExomeSequencing2013]| |
|
| 73 | +|[CXCR4](CXCR4)|2|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|[@krysiakRecurrentSomaticMutations2017b; @khodabakhshiRecurrentTargetsAberrant2012]| |
|
| 76 | 74 | |[DHCR7](DHCR7)|2|[Schmitz et al](papers/schmitzBurkittLymphomaPathogenesis2012)[@schmitzBurkittLymphomaPathogenesis2012]|| |
| 77 | 75 | |[E2F2](E2F2)|2|[Burkhardt et al](papers/burkhardtClinicalRelevanceMolecular2022b)[@burkhardtClinicalRelevanceMolecular2022b]|| |
| 78 | -|[EBF1](EBF1)|2, aSHM|[Thomas et al](papers/thomasGeneticSubgroupsInform2023)[@thomasGeneticSubgroupsInform2023]|[@bohleRoleEarlyBcell2013; @reichelFlowSortingExome2015a]| |
|
| 76 | +|[EBF1](EBF1)|2|[Thomas et al](papers/thomasGeneticSubgroupsInform2023)[@thomasGeneticSubgroupsInform2023]|[@reichelFlowSortingExome2015a; @bohleRoleEarlyBcell2013]| |
|
| 79 | 77 | |[EDNRB](EDNRB)|2|[Burkhardt et al](papers/burkhardtClinicalRelevanceMolecular2022b)[@burkhardtClinicalRelevanceMolecular2022b]|| |
| 80 | 78 | |[EHD1](EHD1)|2|[Thomas et al](papers/thomasGeneticSubgroupsInform2023)[@thomasGeneticSubgroupsInform2023]|| |
| 81 | 79 | |[ELP2](ELP2)|2|[Schmitz et al](papers/schmitzBurkittLymphomaPathogenesis2012)[@schmitzBurkittLymphomaPathogenesis2012]|| |
| 82 | -|[EP300](EP300)|2|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|[@rossiCodingGenomeSplenic2012c; @pasqualucciInactivatingMutationsAcetyltransferase2011a]| |
|
| 83 | 80 | |[ERAP1](ERAP1)|2|[Burkhardt et al](papers/burkhardtClinicalRelevanceMolecular2022b)[@burkhardtClinicalRelevanceMolecular2022b]|| |
| 84 | 81 | |[EXOSC6](EXOSC6)|2|[Schmitz et al](papers/schmitzBurkittLymphomaPathogenesis2012)[@schmitzBurkittLymphomaPathogenesis2012]|| |
| 85 | -|[EZH2](EZH2)|2|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|[@mottokIntegrativeGenomicAnalysis2019b; @morinSomaticMutationsAltering2010a]| |
|
| 82 | +|[EZH2](EZH2)|2|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|[@morinSomaticMutationsAltering2010a; @mottokIntegrativeGenomicAnalysis2019b]| |
|
| 86 | 83 | |[FLYWCH1](FLYWCH1)|2|[Schmitz et al](papers/schmitzBurkittLymphomaPathogenesis2012)[@schmitzBurkittLymphomaPathogenesis2012]|| |
| 87 | 84 | |[GGTLA4](GGTLA4)|2|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|| |
| 88 | -|[GRB2](GRB2)|2|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|[@pasqualucciAnalysisCodingGenome2011]| |
|
| 89 | 85 | |[GTSE1](GTSE1)|2|[Schmitz et al](papers/schmitzBurkittLymphomaPathogenesis2012)[@schmitzBurkittLymphomaPathogenesis2012]|| |
| 90 | -|[HIST1H1E](HIST1H1E)|2, aSHM|[Grande et al](papers/grandeGenomewideDiscoverySomatic2019)[@grandeGenomewideDiscoverySomatic2019]|[@krysiakRecurrentSomaticMutations2017b; @lohrDiscoveryPrioritizationSomatic2012a; @reichelFlowSortingExome2015a]| |
|
| 91 | -|[HIST1H3D](HIST1H3D)|2, aSHM|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|| |
|
| 92 | -|[HIST1H3I](HIST1H3I)|2, aSHM|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|[@krysiakRecurrentSomaticMutations2017b]| |
|
| 93 | -|[HIST1H4J](HIST1H4J)|2, aSHM|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|[@mottokIntegrativeGenomicAnalysis2019b]| |
|
| 86 | +|[HIST1H1E](HIST1H1E)|2|[Grande et al](papers/grandeGenomewideDiscoverySomatic2019)[@grandeGenomewideDiscoverySomatic2019]|[@reichelFlowSortingExome2015a; @krysiakRecurrentSomaticMutations2017b; @lohrDiscoveryPrioritizationSomatic2012a]| |
|
| 87 | +|[HIST1H3D](HIST1H3D)|2|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|| |
|
| 88 | +|[HIST1H3I](HIST1H3I)|2|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|[@krysiakRecurrentSomaticMutations2017b]| |
|
| 89 | +|[HIST1H4J](HIST1H4J)|2|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|[@mottokIntegrativeGenomicAnalysis2019b]| |
|
| 94 | 90 | |[HLA-DQB1](HLA-DQB1)|2|[Burkhardt et al](papers/burkhardtClinicalRelevanceMolecular2022b)[@burkhardtClinicalRelevanceMolecular2022b]|| |
| 95 | -|[IGLL5](IGLL5)|2, aSHM|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|[@russler-germainMutationsAssociatedProgression2023b; @deschGenotypingCirculatingTumor2020]| |
|
| 96 | -|[IKZF3](IKZF3)|2, aSHM|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|[@morinMutationalStructuralAnalysis2013]| |
|
| 97 | -|[IRF8](IRF8)|2, aSHM|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|[@morinFrequentMutationHistonemodifying2011; @mottokIntegrativeGenomicAnalysis2019b]| |
|
| 91 | +|[IGLL5](IGLL5)|2|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|[@russler-germainMutationsAssociatedProgression2023b; @deschGenotypingCirculatingTumor2020]| |
|
| 92 | +|[IKZF3](IKZF3)|2|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|[@morinMutationalStructuralAnalysis2013]| |
|
| 93 | +|[IRF8](IRF8)|2|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|[@morinFrequentMutationHistonemodifying2011; @mottokIntegrativeGenomicAnalysis2019b]| |
|
| 98 | 94 | |[KANK2](KANK2)|2|[Schmitz et al](papers/schmitzBurkittLymphomaPathogenesis2012)[@schmitzBurkittLymphomaPathogenesis2012]|| |
| 99 | 95 | |[KLHL26](KLHL26)|2|[Burkhardt et al](papers/burkhardtClinicalRelevanceMolecular2022b)[@burkhardtClinicalRelevanceMolecular2022b]|| |
| 100 | -|[KLHL6](KLHL6)|2, aSHM|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|[@morinFrequentMutationHistonemodifying2011; @ganapathiGeneticLandscapeDural2016]| |
|
| 101 | 96 | |[KMT2C](KMT2C)|2|[Zhou et al](papers/zhouSporadicEndemicBurkitt2019)[@zhouSporadicEndemicBurkitt2019]|[@zhangGeneticHeterogeneityDiffuse2013; @zhangGenomicLandscapeMantle2014; @sarkozyMutationalLandscapeGray2021a]| |
| 102 | -|[LTB](LTB)|2, aSHM|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|[@chapuyMolecularSubtypesDiffuse2018b; @deschGenotypingCirculatingTumor2020]| |
|
| 103 | -|[MCL1](MCL1)|2|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|[@reddyGeneticFunctionalDrivers2017; @dunsCharacterizationDLBCLPMBL2021b]| |
|
| 104 | -|[MIR142](MIR142)|2, aSHM|[Grande et al](papers/grandeGenomewideDiscoverySomatic2019)[@grandeGenomewideDiscoverySomatic2019]|[@kwanhianMicroRNA142Mutated202012b]| |
|
| 97 | +|[MCL1](MCL1)|2|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|[@dunsCharacterizationDLBCLPMBL2021b; @reddyGeneticFunctionalDrivers2017]| |
|
| 98 | +|[MIR142](MIR142)|2|[Grande et al](papers/grandeGenomewideDiscoverySomatic2019)[@grandeGenomewideDiscoverySomatic2019]|[@kwanhianMicroRNA142Mutated202012b]| |
|
| 105 | 99 | |[MKI67](MKI67)|2|[Schmitz et al](papers/schmitzBurkittLymphomaPathogenesis2012)[@schmitzBurkittLymphomaPathogenesis2012]|[@russler-germainMutationsAssociatedProgression2023b]| |
| 106 | 100 | |[MYO18A](MYO18A)|2|[Schmitz et al](papers/schmitzBurkittLymphomaPathogenesis2012)[@schmitzBurkittLymphomaPathogenesis2012]|| |
| 107 | 101 | |[NBEAL1](NBEAL1)|2|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|| |
| 108 | 102 | |[NCOR2](NCOR2)|2|[Schmitz et al](papers/schmitzBurkittLymphomaPathogenesis2012)[@schmitzBurkittLymphomaPathogenesis2012]|[@sarkozyMutationalLandscapeGray2021a; @spinaGeneticsNodalMarginal2016b]| |
| 109 | 103 | |[NOA1](NOA1)|2|[Burkhardt et al](papers/burkhardtClinicalRelevanceMolecular2022b)[@burkhardtClinicalRelevanceMolecular2022b]|| |
| 110 | -|[NOTCH2](NOTCH2)|2|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|[@rossiCodingGenomeSplenic2012c; @troenNOTCH2MutationsMarginal2008; @beaLandscapeSomaticMutations2013]| |
|
| 111 | 104 | |[P2RY2](P2RY2)|2|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|| |
| 112 | 105 | |[PCBP1](PCBP1)|2|[Schmitz et al](papers/schmitzBurkittLymphomaPathogenesis2012)[@schmitzBurkittLymphomaPathogenesis2012]|| |
| 113 | 106 | |[PDCD11](PDCD11)|2|[Schmitz et al](papers/schmitzBurkittLymphomaPathogenesis2012)[@schmitzBurkittLymphomaPathogenesis2012]|| |
| 114 | -|[PIM1](PIM1)|2, aSHM|[Burkhardt et al](papers/burkhardtClinicalRelevanceMolecular2022b)[@burkhardtClinicalRelevanceMolecular2022b]|[@dunsCharacterizationDLBCLPMBL2021b; @pasqualucciHypermutationMultipleProtooncogenes2001a]| |
|
| 115 | -|[PLCG2](PLCG2)|2|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|| |
|
| 107 | +|[PIM1](PIM1)|2|[Burkhardt et al](papers/burkhardtClinicalRelevanceMolecular2022b)[@burkhardtClinicalRelevanceMolecular2022b]|[@dunsCharacterizationDLBCLPMBL2021b; @pasqualucciHypermutationMultipleProtooncogenes2001a]| |
|
| 108 | +|[PLCG2](PLCG2)|2|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|[@fanComprehensiveCharacterizationDriver2020b]| |
|
| 116 | 109 | |[PPP6R2](PPP6R2)|2|[Burkhardt et al](papers/burkhardtClinicalRelevanceMolecular2022b)[@burkhardtClinicalRelevanceMolecular2022b]|| |
| 117 | 110 | |[PREX1](PREX1)|2|[Burkhardt et al](papers/burkhardtClinicalRelevanceMolecular2022b)[@burkhardtClinicalRelevanceMolecular2022b]|| |
| 118 | -|[RAC2](RAC2)|2|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|[@hubschmannMutationalMechanismsShaping2021b]| |
|
| 119 | 111 | |[RANBP6](RANBP6)|2|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|| |
| 120 | 112 | |[REV3L](REV3L)|2|[Burkhardt et al](papers/burkhardtClinicalRelevanceMolecular2022b)[@burkhardtClinicalRelevanceMolecular2022b]|| |
| 121 | 113 | |[RNF144B](RNF144B)|2|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|| |
| 122 | 114 | |[RPL10](RPL10)|2|[Burkhardt et al](papers/burkhardtClinicalRelevanceMolecular2022b)[@burkhardtClinicalRelevanceMolecular2022b]|| |
| 123 | -|[S1PR2](S1PR2)|2, aSHM|[Muppidi et al](papers/muppidiLossSignalingGa132014b)[@muppidiLossSignalingGa132014b]|[@morinFrequentMutationHistonemodifying2011]| |
|
| 115 | +|[S1PR2](S1PR2)|2|[Muppidi et al](papers/muppidiLossSignalingGa132014b)[@muppidiLossSignalingGa132014b]|[@morinFrequentMutationHistonemodifying2011]| |
|
| 124 | 116 | |[SAL3](SAL3)|2|[Burkhardt et al](papers/burkhardtClinicalRelevanceMolecular2022b)[@burkhardtClinicalRelevanceMolecular2022b]|| |
| 125 | -|[TET2](TET2)|2|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|[@albuquerqueEnhancingKnowledgeDiscovery2017a]| |
|
| 117 | +|[TET2](TET2)|2|[Thomas et al](papers/thomasGeneticSubgroupsInform2023)[@thomasGeneticSubgroupsInform2023]|[@albuquerqueEnhancingKnowledgeDiscovery2017a]| |
|
| 126 | 118 | |[TOP2A](TOP2A)|2|[Schmitz et al](papers/schmitzBurkittLymphomaPathogenesis2012)[@schmitzBurkittLymphomaPathogenesis2012]|| |
| 127 | 119 | |[TTN](TTN)|2|[Burkhardt et al](papers/burkhardtClinicalRelevanceMolecular2022b)[@burkhardtClinicalRelevanceMolecular2022b]|| |
| 128 | 120 | |[VWA7](VWA7)|2|[Burkhardt et al](papers/burkhardtClinicalRelevanceMolecular2022b)[@burkhardtClinicalRelevanceMolecular2022b]|| |
| ... | ... | @@ -132,17 +124,24 @@ link-citations: true |
| 132 | 124 | |[YY1AP1](YY1AP1)|2|[Schmitz et al](papers/schmitzBurkittLymphomaPathogenesis2012)[@schmitzBurkittLymphomaPathogenesis2012]|| |
| 133 | 125 | |[ZAN](ZAN)|2|[Burkhardt et al](papers/burkhardtClinicalRelevanceMolecular2022b)[@burkhardtClinicalRelevanceMolecular2022b]|| |
| 134 | 126 | |[ZBTB7A](ZBTB7A)|2|[Burkhardt et al](papers/burkhardtClinicalRelevanceMolecular2022b)[@burkhardtClinicalRelevanceMolecular2022b]|[@reddyGeneticFunctionalDrivers2017]| |
| 135 | -|[ZFP36L1](ZFP36L1)|2, aSHM|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|[@reichelFlowSortingExome2015a; @morinFrequentMutationHistonemodifying2011]| |
|
| 127 | +|[ZFP36L1](ZFP36L1)|2|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|[@morinFrequentMutationHistonemodifying2011; @reichelFlowSortingExome2015a]| |
|
| 136 | 128 | |[ZNF85](ZNF85)|2|[Burkhardt et al](papers/burkhardtClinicalRelevanceMolecular2022b)[@burkhardtClinicalRelevanceMolecular2022b]|| |
| 129 | + |
|
| 130 | +## Tier 3 BL genes |
|
| 131 | + |
|
| 132 | +### *70 total* |
|
| 133 | + |
|
| 134 | +|Gene|Tier| First BL evidence | Other entities | |
|
| 135 | +|:-:|:-:|:--|:-| |
|
| 137 | 136 | |[ACAD9](ACAD9)|2-F|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|| |
| 138 | -|[ACE](ACE)|2-F|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|| |
|
| 137 | +|[ACE](ACE)|2-F|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|[@zhangGeneticHeterogeneityDiffuse2013]| |
|
| 139 | 138 | |[ALPK2](ALPK2)|2-F|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|| |
| 140 | 139 | |[ATP2C2](ATP2C2)|2-F|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|| |
| 141 | 140 | |[BRAF](BRAF)|2-F|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|[@tiacciBRAFMutationsHairycell2011a]| |
| 142 | -|[BRD4](BRD4)|2-F|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|| |
|
| 141 | +|[BRD4](BRD4)|2-F|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|[@zhangGeneticHeterogeneityDiffuse2013]| |
|
| 143 | 142 | |[BTG2](BTG2)|2-F|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|[@morinFrequentMutationHistonemodifying2011]| |
| 144 | 143 | |[C6orf27](C6orf27)|2-F|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|| |
| 145 | -|[CAD](CAD)|2-F|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|| |
|
| 144 | +|[CAD](CAD)|2-F|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|[@zhangGeneticHeterogeneityDiffuse2013]| |
|
| 146 | 145 | |[CCT6B](CCT6B)|2-F|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|| |
| 147 | 146 | |[CD79B](CD79B)|2-F|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|[@morinFrequentMutationHistonemodifying2011]| |
| 148 | 147 | |[CDH17](CDH17)|2-F|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|| |
| ... | ... | @@ -150,9 +149,9 @@ link-citations: true |
| 150 | 149 | |[CTCF](CTCF)|2-F|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|| |
| 151 | 150 | |[CYB5D1](CYB5D1)|2-F|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|| |
| 152 | 151 | |[CYP4F22](CYP4F22)|2-F|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|| |
| 153 | -|[DLGAP1](DLGAP1)|2-F|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|| |
|
| 152 | +|[DLGAP1](DLGAP1)|2-F|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|[@zhangGeneticHeterogeneityDiffuse2013]| |
|
| 154 | 153 | |[DNMT1](DNMT1)|2-F|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|| |
| 155 | -|[DTX1](DTX1)|2-F|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|[@schmitzGeneticsPathogenesisDiffuse2018a; @rossiCodingGenomeSplenic2012c; @gomezUltraDeepSequencingReveals2023]| |
|
| 154 | +|[DTX1](DTX1)|2-F|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|[@rossiCodingGenomeSplenic2012c; @gomezUltraDeepSequencingReveals2023; @zhangGeneticHeterogeneityDiffuse2013]| |
|
| 156 | 155 | |[EIF2C4](EIF2C4)|2-F|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|| |
| 157 | 156 | |[EML2](EML2)|2-F|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|| |
| 158 | 157 | |[ENTPD3](ENTPD3)|2-F|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|| |
| ... | ... | @@ -164,7 +163,7 @@ link-citations: true |
| 164 | 163 | |[FZD3](FZD3)|2-F|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|| |
| 165 | 164 | |[GRIK5](GRIK5)|2-F|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|| |
| 166 | 165 | |[HIST1H1C](HIST1H1C)|2-F|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|[@morinFrequentMutationHistonemodifying2011]| |
| 167 | -|[HIST1H2AG](HIST1H2AG)|2-F|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|[@krysiakRecurrentSomaticMutations2017b; @morinMutationalStructuralAnalysis2013; @rossiCodingGenomeSplenic2012c]| |
|
| 166 | +|[HIST1H2AG](HIST1H2AG)|2-F|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|[@krysiakRecurrentSomaticMutations2017b; @rossiCodingGenomeSplenic2012c; @morinMutationalStructuralAnalysis2013]| |
|
| 168 | 167 | |[HIST1H2AM](HIST1H2AM)|2-F|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|[@krysiakRecurrentSomaticMutations2017b]| |
| 169 | 168 | |[HIST1H2BK](HIST1H2BK)|2-F|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|[@rossiCodingGenomeSplenic2012c]| |
| 170 | 169 | |[HIST1H3H](HIST1H3H)|2-F|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|| |
| ... | ... | @@ -177,12 +176,12 @@ link-citations: true |
| 177 | 176 | |[MME](MME)|2-F|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|| |
| 178 | 177 | |[MTOR](MTOR)|2-F|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|[@zhangGeneticHeterogeneityDiffuse2013]| |
| 179 | 178 | |[MYH10](MYH10)|2-F|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|| |
| 180 | -|[NOTCH1](NOTCH1)|2-F|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|[@rossiCodingGenomeSplenic2012c; @beaLandscapeSomaticMutations2013; @pasqualucciAnalysisCodingGenome2011]| |
|
| 181 | -|[NRXN2](NRXN2)|2-F|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|| |
|
| 179 | +|[NOTCH1](NOTCH1)|2-F|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|[@pasqualucciAnalysisCodingGenome2011; @rossiCodingGenomeSplenic2012c; @beaLandscapeSomaticMutations2013]| |
|
| 180 | +|[NRXN2](NRXN2)|2-F|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|[@zhangGeneticHeterogeneityDiffuse2013]| |
|
| 182 | 181 | |[PABPC4L](PABPC4L)|2-F|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|| |
| 183 | 182 | |[PC](PC)|2-F|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|| |
| 184 | 183 | |[PCDHA11](PCDHA11)|2-F|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|| |
| 185 | -|[PDZRN3](PDZRN3)|2-F|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|| |
|
| 184 | +|[PDZRN3](PDZRN3)|2-F|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|[@zhangGeneticHeterogeneityDiffuse2013]| |
|
| 186 | 185 | |[PIK3R1](PIK3R1)|2-F|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|[@zhangGeneticHeterogeneityDiffuse2013]| |
| 187 | 186 | |[POLRMT](POLRMT)|2-F|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|| |
| 188 | 187 | |[POR](POR)|2-F|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|| |
| ... | ... | @@ -190,7 +189,7 @@ link-citations: true |
| 190 | 189 | |[PTPRN](PTPRN)|2-F|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|| |
| 191 | 190 | |[PXDNL](PXDNL)|2-F|[Panea et al](papers/paneaWholeGenomeLandscape2019)[@paneaWholeGenomeLandscape2019]|| |
| 192 | 191 | |[RBP3](RBP3)|2-F|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|| |
| 193 | -|[RET](RET)|2-F|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|| |
|
| 192 | +|[RET](RET)|2-F|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|[@fanComprehensiveCharacterizationDriver2020b]| |
|
| 194 | 193 | |[SALL3](SALL3)|2-F|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|[@zhangGenomicLandscapeMantle2014]| |
| 195 | 194 | |[SAPS2](SAPS2)|2-F|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|| |
| 196 | 195 | |[SBF1](SBF1)|2-F|[Love et al](papers/loveGeneticLandscapeMutations2012)[@loveGeneticLandscapeMutations2012]|| |