cac5446a32d8062f1c2f9d9cb4a465e54d90e593
MCL_Tier1.md
| ... | ... | @@ -1,25 +0,0 @@ |
| 1 | -|Gene|Status| First MCL study | Other lists | |
|
| 2 | -|:-:|:-:|:-:|:----| |
|
| 3 | -|[ATM](ATM)|MCL Tier 1|[Bea et al](papers/beaLandscapeSomaticMutations2013)|[DLBCL](DLBCL_genes#tier-1-dlbcl-genes), [MZL](MZL_genes#tier-1-mzl-genes)| |
|
| 4 | -|[BIRC3](BIRC3)|MCL Tier 1|[Bea et al](papers/beaLandscapeSomaticMutations2013)|[DLBCL](DLBCL_genes#tier-2-dlbcl-genes), [PMBL](PMBL_genes#tier-2-pmbl-genes), [MZL](MZL_genes#tier-1-mzl-genes)| |
|
| 5 | -|[CARD11](CARD11)|MCL Tier 1|[Wu et al](papers/wuGeneticHeterogeneityPrimary2016)|[BL](BL_genes#tier-2-bl-genes), [DLBCL](DLBCL_genes#tier-1-dlbcl-genes), [FL](FL_genes#tier-1-fl-genes), [MZL](MZL_genes#tier-1-mzl-genes)| |
|
| 6 | -|[CCND1](CCND1)|MCL Tier 1|[Bea et al](papers/beaLandscapeSomaticMutations2013)|| |
|
| 7 | -|[DAZAP1](DAZAP1)|MCL Tier 1|[Pararajalingam et al](papers/pararajalingamCodingNoncodingDrivers2020)|[DLBCL](DLBCL_genes#tier-2-dlbcl-genes)| |
|
| 8 | -|[EWSR1](EWSR1)|MCL Tier 1|[Pararajalingam et al](papers/pararajalingamCodingNoncodingDrivers2020)|[PMBL](PMBL_genes#tier-2-pmbl-genes)| |
|
| 9 | -|[HNRNPH1](HNRNPH1)|MCL Tier 1|[Pararajalingam et al](papers/pararajalingamCodingNoncodingDrivers2020)|[DLBCL](DLBCL_genes#tier-2-dlbcl-genes)| |
|
| 10 | -|[KMT2D](KMT2D)|MCL Tier 1|[Bea et al](papers/beaLandscapeSomaticMutations2013)|[BL](BL_genes#tier-1-bl-genes), [DLBCL](DLBCL_genes#tier-1-dlbcl-genes), [FL](FL_genes#tier-1-fl-genes), [PMBL](PMBL_genes#tier-2-pmbl-genes), [MZL](MZL_genes#tier-1-mzl-genes)| |
|
| 11 | -|[MEF2B](MEF2B)|MCL Tier 1|[Bea et al](papers/beaLandscapeSomaticMutations2013)|[DLBCL](DLBCL_genes#tier-1-dlbcl-genes), [FL](FL_genes#tier-1-fl-genes)| |
|
| 12 | -|[NFKBIE](NFKBIE)|MCL Tier 1|[Pararajalingam et al](papers/pararajalingamCodingNoncodingDrivers2020)|[DLBCL](DLBCL_genes#tier-1-dlbcl-genes), [PMBL](PMBL_genes#tier-1-pmbl-genes)| |
|
| 13 | -|[NOTCH1](NOTCH1)|MCL Tier 1|[Bea et al](papers/beaLandscapeSomaticMutations2013)|[BL](BL_genes#tier-3-bl-genes), [DLBCL](DLBCL_genes#tier-1-dlbcl-genes), [MZL](MZL_genes#tier-1-mzl-genes)| |
|
| 14 | -|[NOTCH2](NOTCH2)|MCL Tier 1|[Bea et al](papers/beaLandscapeSomaticMutations2013)|[DLBCL](DLBCL_genes#tier-1-dlbcl-genes), [MZL](MZL_genes#tier-1-mzl-genes)| |
|
| 15 | -|[NSD2](NSD2)|MCL Tier 1|[Bea et al](papers/beaLandscapeSomaticMutations2013)|[DLBCL](DLBCL_genes#tier-3-dlbcl-genes), [PMBL](PMBL_genes#tier-2-pmbl-genes)| |
|
| 16 | -|[POT1](POT1)|MCL Tier 1|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|| |
|
| 17 | -|[RB1](RB1)|MCL Tier 1|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|[DLBCL](DLBCL_genes#tier-1-dlbcl-genes)| |
|
| 18 | -|[S1PR1](S1PR1)|MCL Tier 1|[Pararajalingam et al](papers/pararajalingamCodingNoncodingDrivers2020)|[DLBCL](DLBCL_genes#tier-2-dlbcl-genes)| |
|
| 19 | -|[SMARCA4](SMARCA4)|MCL Tier 1|[Nadeu et al](papers/nadeuGenomicEpigenomicInsights2020b)|[BL](BL_genes#tier-1-bl-genes), [DLBCL](DLBCL_genes#tier-1-dlbcl-genes), [FL](FL_genes#tier-1-fl-genes), [PMBL](PMBL_genes#tier-2-pmbl-genes)| |
|
| 20 | -|[SP140](SP140)|MCL Tier 1|[Bea et al](papers/beaLandscapeSomaticMutations2013)|| |
|
| 21 | -|[SYNE1](SYNE1)|MCL Tier 1|[Nadeu et al](papers/nadeuGenomicEpigenomicInsights2020b)|| |
|
| 22 | -|[TERT](TERT)|MCL Tier 1|[Nadeu et al](papers/nadeuGenomicEpigenomicInsights2020b)|| |
|
| 23 | -|[TLR2](TLR2)|MCL Tier 1|[Bea et al](papers/beaLandscapeSomaticMutations2013)|[DLBCL](DLBCL_genes#tier-2-dlbcl-genes)| |
|
| 24 | -|[TP53](TP53)|MCL Tier 1|[Bea et al](papers/beaLandscapeSomaticMutations2013)|[BL](BL_genes#tier-1-bl-genes), [DLBCL](DLBCL_genes#tier-1-dlbcl-genes), [FL](FL_genes#tier-1-fl-genes), [PMBL](PMBL_genes#tier-1-pmbl-genes), [MZL](MZL_genes#tier-1-mzl-genes)| |
|
| 25 | -|[UBR5](UBR5)|MCL Tier 1|[Pararajalingam et al](papers/pararajalingamCodingNoncodingDrivers2020)|[DLBCL](DLBCL_genes#tier-2-dlbcl-genes), [PMBL](PMBL_genes#tier-2-pmbl-genes)| |
MCL_Tier2.md
| ... | ... | @@ -1,48 +0,0 @@ |
| 1 | -|Gene|Status| First MCL study | Other lists | |
|
| 2 | -|:-:|:-:|:-:|:----| |
|
| 3 | -|[ABCA3](ABCA3)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|[DLBCL](DLBCL_genes#tier-3-dlbcl-genes)| |
|
| 4 | -|[ABCC9](ABCC9)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|| |
|
| 5 | -|[ANK2](ANK2)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|[DLBCL](DLBCL_genes#tier-3-dlbcl-genes)| |
|
| 6 | -|[ARID1B](ARID1B)|MCL Tier 2||[DLBCL](DLBCL_genes#tier-3-dlbcl-genes)| |
|
| 7 | -|[ATP11C](ATP11C)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|| |
|
| 8 | -|[B2M](B2M)|MCL Tier 2|[Pararajalingam et al](papers/pararajalingamCodingNoncodingDrivers2020)|[BL](BL_genes#tier-2-bl-genes), [DLBCL](DLBCL_genes#tier-1-dlbcl-genes), [FL](FL_genes#tier-1-fl-genes), [PMBL](PMBL_genes#tier-1-pmbl-genes)| |
|
| 9 | -|[BCOR](BCOR)|MCL Tier 2|[Nadeu et al](papers/nadeuGenomicEpigenomicInsights2020b)|[MZL](MZL_genes#tier-2-mzl-genes)| |
|
| 10 | -|[CDH8](CDH8)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|[DLBCL](DLBCL_genes#tier-3-dlbcl-genes)| |
|
| 11 | -|[CHMP4C](CHMP4C)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|| |
|
| 12 | -|[COL11A1](COL11A1)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|| |
|
| 13 | -|[COL16A1](COL16A1)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|| |
|
| 14 | -|[CRYBG3](CRYBG3)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|| |
|
| 15 | -|[CTNNA2](CTNNA2)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|| |
|
| 16 | -|[DCP1B](DCP1B)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|| |
|
| 17 | -|[DHDH](DHDH)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|| |
|
| 18 | -|[DLC1](DLC1)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|| |
|
| 19 | -|[DLGAP2](DLGAP2)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|| |
|
| 20 | -|[DNAJC6](DNAJC6)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|| |
|
| 21 | -|[EIF2AK4](EIF2AK4)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|| |
|
| 22 | -|[ESX1](ESX1)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|| |
|
| 23 | -|[FAT4](FAT4)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|[DLBCL](DLBCL_genes#tier-2-dlbcl-genes), [PMBL](PMBL_genes#tier-2-pmbl-genes), [MZL](MZL_genes#tier-2-mzl-genes)| |
|
| 24 | -|[GRIN2A](GRIN2A)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|| |
|
| 25 | -|[HEPH](HEPH)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|[DLBCL](DLBCL_genes#tier-2-dlbcl-genes)| |
|
| 26 | -|[KCNC2](KCNC2)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|| |
|
| 27 | -|[KIAA1671](KIAA1671)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|| |
|
| 28 | -|[KMT2C](KMT2C)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|[BL](BL_genes#tier-2-bl-genes), [DLBCL](DLBCL_genes#tier-1-dlbcl-genes), [PMBL](PMBL_genes#tier-1-pmbl-genes)| |
|
| 29 | -|[LUZP4](LUZP4)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|| |
|
| 30 | -|[MRGPRF](MRGPRF)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|| |
|
| 31 | -|[NIN](NIN)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|| |
|
| 32 | -|[OGDHL](OGDHL)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|| |
|
| 33 | -|[PCDHB2](PCDHB2)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|| |
|
| 34 | -|[PCSK2](PCSK2)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|| |
|
| 35 | -|[PDLIM3](PDLIM3)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|| |
|
| 36 | -|[PLXNB3](PLXNB3)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|[MZL](MZL_genes#tier-2-mzl-genes)| |
|
| 37 | -|[RGS4](RGS4)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|| |
|
| 38 | -|[ROBO2](ROBO2)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|| |
|
| 39 | -|[SALL3](SALL3)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|[BL](BL_genes#tier-3-bl-genes)| |
|
| 40 | -|[SI](SI)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|| |
|
| 41 | -|[SLC17A6](SLC17A6)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|| |
|
| 42 | -|[SMARCB1](SMARCB1)|MCL Tier 2|[Nadeu et al](papers/nadeuGenomicEpigenomicInsights2020b)|| |
|
| 43 | -|[SMC1A](SMC1A)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|| |
|
| 44 | -|[TBC1D26](TBC1D26)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|| |
|
| 45 | -|[TNRC6B](TNRC6B)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|| |
|
| 46 | -|[TRPM6](TRPM6)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|| |
|
| 47 | -|[ZNF117](ZNF117)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|| |
|
| 48 | -|[ZNF296](ZNF296)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|| |
MCL_Tier3.md
| ... | ... | @@ -1,4 +0,0 @@ |
| 1 | -|Gene|Status| First MCL study | Other lists | |
|
| 2 | -|:-:|:-:|:-:|:----| |
|
| 3 | - |
|
| 4 | -# References |
pages/MCL_Tier2.md
| ... | ... | @@ -0,0 +1,48 @@ |
| 1 | +|Gene|Status| First MCL study | Other lists | |
|
| 2 | +|:-:|:-:|:-:|:----| |
|
| 3 | +|[ABCA3](ABCA3)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|[DLBCL](DLBCL_genes#tier-3-dlbcl-genes)| |
|
| 4 | +|[ABCC9](ABCC9)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|| |
|
| 5 | +|[ANK2](ANK2)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|[DLBCL](DLBCL_genes#tier-3-dlbcl-genes)| |
|
| 6 | +|[ARID1B](ARID1B)|MCL Tier 2||[DLBCL](DLBCL_genes#tier-3-dlbcl-genes)| |
|
| 7 | +|[ATP11C](ATP11C)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|| |
|
| 8 | +|[B2M](B2M)|MCL Tier 2|[Pararajalingam et al](papers/pararajalingamCodingNoncodingDrivers2020)|[BL](BL_genes#tier-2-bl-genes), [DLBCL](DLBCL_genes#tier-1-dlbcl-genes), [FL](FL_genes#tier-1-fl-genes), [PMBL](PMBL_genes#tier-1-pmbl-genes)| |
|
| 9 | +|[BCOR](BCOR)|MCL Tier 2|[Nadeu et al](papers/nadeuGenomicEpigenomicInsights2020b)|[MZL](MZL_genes#tier-2-mzl-genes)| |
|
| 10 | +|[CDH8](CDH8)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|[DLBCL](DLBCL_genes#tier-3-dlbcl-genes)| |
|
| 11 | +|[CHMP4C](CHMP4C)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|| |
|
| 12 | +|[COL11A1](COL11A1)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|| |
|
| 13 | +|[COL16A1](COL16A1)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|| |
|
| 14 | +|[CRYBG3](CRYBG3)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|| |
|
| 15 | +|[CTNNA2](CTNNA2)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|| |
|
| 16 | +|[DCP1B](DCP1B)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|| |
|
| 17 | +|[DHDH](DHDH)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|| |
|
| 18 | +|[DLC1](DLC1)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|| |
|
| 19 | +|[DLGAP2](DLGAP2)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|| |
|
| 20 | +|[DNAJC6](DNAJC6)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|| |
|
| 21 | +|[EIF2AK4](EIF2AK4)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|| |
|
| 22 | +|[ESX1](ESX1)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|| |
|
| 23 | +|[FAT4](FAT4)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|[DLBCL](DLBCL_genes#tier-2-dlbcl-genes), [PMBL](PMBL_genes#tier-2-pmbl-genes), [MZL](MZL_genes#tier-2-mzl-genes)| |
|
| 24 | +|[GRIN2A](GRIN2A)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|| |
|
| 25 | +|[HEPH](HEPH)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|[DLBCL](DLBCL_genes#tier-2-dlbcl-genes)| |
|
| 26 | +|[KCNC2](KCNC2)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|| |
|
| 27 | +|[KIAA1671](KIAA1671)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|| |
|
| 28 | +|[KMT2C](KMT2C)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|[BL](BL_genes#tier-2-bl-genes), [DLBCL](DLBCL_genes#tier-1-dlbcl-genes), [PMBL](PMBL_genes#tier-1-pmbl-genes)| |
|
| 29 | +|[LUZP4](LUZP4)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|| |
|
| 30 | +|[MRGPRF](MRGPRF)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|| |
|
| 31 | +|[NIN](NIN)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|| |
|
| 32 | +|[OGDHL](OGDHL)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|| |
|
| 33 | +|[PCDHB2](PCDHB2)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|| |
|
| 34 | +|[PCSK2](PCSK2)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|| |
|
| 35 | +|[PDLIM3](PDLIM3)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|| |
|
| 36 | +|[PLXNB3](PLXNB3)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|[MZL](MZL_genes#tier-2-mzl-genes)| |
|
| 37 | +|[RGS4](RGS4)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|| |
|
| 38 | +|[ROBO2](ROBO2)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|| |
|
| 39 | +|[SALL3](SALL3)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|[BL](BL_genes#tier-3-bl-genes)| |
|
| 40 | +|[SI](SI)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|| |
|
| 41 | +|[SLC17A6](SLC17A6)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|| |
|
| 42 | +|[SMARCB1](SMARCB1)|MCL Tier 2|[Nadeu et al](papers/nadeuGenomicEpigenomicInsights2020b)|| |
|
| 43 | +|[SMC1A](SMC1A)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|| |
|
| 44 | +|[TBC1D26](TBC1D26)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|| |
|
| 45 | +|[TNRC6B](TNRC6B)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|| |
|
| 46 | +|[TRPM6](TRPM6)|MCL Tier 2|[Bea et al](papers/beaLandscapeSomaticMutations2013)|| |
|
| 47 | +|[ZNF117](ZNF117)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|| |
|
| 48 | +|[ZNF296](ZNF296)|MCL Tier 2|[Zhang et al](papers/zhangGenomicLandscapeMantle2014)|| |
pages/MCL_Tier3.md
| ... | ... | @@ -0,0 +1,4 @@ |
| 1 | +|Gene|Status| First MCL study | Other lists | |
|
| 2 | +|:-:|:-:|:-:|:----| |
|
| 3 | + |
|
| 4 | +# References |