SMARCA4.md
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## Mutation pattern and selective pressure estimates
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-|Entity|aSHM|Significant selection|dN/dS (missense)|dN/dS (nonsense)|
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-|:------:|:----:|:---------------------:|:----------------:|:----------------:|
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-|BL |No |Yes |13.014 |7.632 |
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-|DLBCL |No |No | 3.876 |0.000 |
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-|FL |No |No |11.081 |0.000 |
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View coding variants in ProteinPaint [hg19](https://morinlab.github.io/LLMPP/GAMBL/SMARCA4_protein.html) or [hg38](https://morinlab.github.io/LLMPP/GAMBL/SMARCA4_protein_hg38.html)
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TCF3.md
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## Mutation pattern and selective pressure estimates
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-|Entity|aSHM|Significant selection|dN/dS (missense)|dN/dS (nonsense)|
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-|:------:|:----:|:---------------------:|:----------------:|:----------------:|
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-|BL |No |No |4.463 |34.108 |
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-|DLBCL |No |No |1.567 | 0.000 |
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-|FL |No |No |0.000 | 0.000 |
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## TCF3 Hotspots
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TCL1A.md
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## Mutation pattern and selective pressure estimates
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-|Entity|aSHM|Significant selection|dN/dS (missense)|dN/dS (nonsense)|
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-|:------:|:----:|:---------------------:|:----------------:|:----------------:|
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-|BL |Yes |Yes |13.813 | 49.800 |
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-|DLBCL |Yes |Yes |25.501 |112.487 |
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-|FL |Yes |No |30.159 | 88.355 |
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+[[include:dnds_TCL1A.md]]
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## aSHM regions
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TFAP4.md
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## Mutation pattern and selective pressure estimates
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-|Entity|aSHM|Significant selection|dN/dS (missense)|dN/dS (nonsense)|
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-|:------:|:----:|:---------------------:|:----------------:|:----------------:|
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-|BL |No |Yes |16.997 |47.948 |
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-|DLBCL |No |No | 5.215 | 0.000 |
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-|FL |No |No | 0.000 | 0.000 |
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+[[include:dnds_TFAP4.md]]
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View coding variants in ProteinPaint [hg19](https://morinlab.github.io/LLMPP/GAMBL/TFAP4_protein.html) or [hg38](https://morinlab.github.io/LLMPP/GAMBL/TFAP4_protein_hg38.html)
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TP53.md
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## Mutation pattern and selective pressure estimates
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-|Entity|aSHM|Significant selection|dN/dS (missense)|dN/dS (nonsense)|
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-|:------:|:----:|:---------------------:|:----------------:|:----------------:|
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-|BL |No |Yes | 83.783 | 58.309 |
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-|DLBCL |No |Yes |127.531 |143.760 |
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-|FL |No |Yes | 63.211 |142.226 |
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View coding variants in ProteinPaint [hg19](https://morinlab.github.io/LLMPP/GAMBL/TP53_protein.html) or [hg38](https://morinlab.github.io/LLMPP/GAMBL/TP53_protein_hg38.html)
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USP7.md
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## Mutation pattern and selective pressure estimates
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-|Entity|aSHM|Significant selection|dN/dS (missense)|dN/dS (nonsense)|
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-|:------:|:----:|:---------------------:|:----------------:|:----------------:|
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-|BL |No |Yes |3.462 |21.705 |
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-|DLBCL |No |No |0.938 | 0.000 |
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-|FL |No |No |0.000 |15.446 |
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View coding variants in ProteinPaint [hg19](https://morinlab.github.io/LLMPP/GAMBL/USP7_protein.html) or [hg38](https://morinlab.github.io/LLMPP/GAMBL/USP7_protein_hg38.html)
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WNK1.md
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## Mutation pattern and selective pressure estimates
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-|Entity|aSHM|Significant selection|dN/dS (missense)|dN/dS (nonsense)|
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-|:------:|:----:|:---------------------:|:----------------:|:----------------:|
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-|BL |No |No |3.429 |0 |
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-|DLBCL |No |No |1.812 |0 |
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-|FL |No |No |3.487 |0 |
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## WNK1 Hotspots
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