CARD4.md
... ...
@@ -18,12 +18,12 @@ nocite: |
18 18
19 19
## Mutation incidence in large patient cohorts (GAMBL reanalysis)
20 20
21
-|Entity|source |frequency (%)|
22
-|:------:|:---------------------:|:-------------:|
23
-|BL |GAMBL genomes+capture|NA |
24
-|BL |Thomas cohort |NA |
25
-|BL |Panea cohort |NA |
21
+### BL
22
+[[include:tables/BL_CARD4]]
26 23
24
+## Mutation pattern and selective pressure estimates
25
+
26
+[[include:tables/dnds_CARD4.md]]
27 27
28 28
[[include:browser_CARD4.md]]
29 29
tables/BL_CARD4.md
... ...
@@ -0,0 +1,42 @@
1
+<table class="table" style="margin-left: 0; margin-right: auto;">
2
+ <thead>
3
+ <tr>
4
+ <th style="text-align:left;"> pathology </th>
5
+ <th style="text-align:left;"> Samples </th>
6
+ <th style="text-align:right;"> Incidence </th>
7
+ <th style="text-align:left;"> CI </th>
8
+ </tr>
9
+ </thead>
10
+<tbody>
11
+ <tr>
12
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> BL </td>
13
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> GAMBL without Panea </td>
14
+ <td style="text-align:right;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> <span style=" color: rgba(0, 0, 0, 255) !important;border-radius: 4px; padding-right: 4px; padding-left: 4px; background-color: rgba(255, 245, 240, 255) !important;">0</span> </td>
15
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> [0,0] </td>
16
+ </tr>
17
+ <tr>
18
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> BL </td>
19
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> GAMBL with Panea </td>
20
+ <td style="text-align:right;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> <span style=" color: rgba(0, 0, 0, 255) !important;border-radius: 4px; padding-right: 4px; padding-left: 4px; background-color: rgba(255, 245, 240, 255) !important;">0</span> </td>
21
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> [0,0] </td>
22
+ </tr>
23
+ <tr>
24
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> BL </td>
25
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> BLGSP </td>
26
+ <td style="text-align:right;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> <span style=" color: rgba(0, 0, 0, 255) !important;border-radius: 4px; padding-right: 4px; padding-left: 4px; background-color: rgba(255, 245, 240, 255) !important;">0</span> </td>
27
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> [0,0] </td>
28
+ </tr>
29
+ <tr>
30
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> BL </td>
31
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> Zhou/ICGC </td>
32
+ <td style="text-align:right;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> <span style=" color: rgba(0, 0, 0, 255) !important;border-radius: 4px; padding-right: 4px; padding-left: 4px; background-color: rgba(255, 245, 240, 255) !important;">0</span> </td>
33
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> [0,0] </td>
34
+ </tr>
35
+ <tr>
36
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> BL </td>
37
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> Panea </td>
38
+ <td style="text-align:right;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> <span style=" color: rgba(0, 0, 0, 255) !important;border-radius: 4px; padding-right: 4px; padding-left: 4px; background-color: rgba(255, 245, 240, 255) !important;">0</span> </td>
39
+ <td style="text-align:left;color: rgba(0, 0, 0, 255) !important;background-color: rgba(255, 245, 240, 255) !important;border-left:1px solid #DDDDDD;white-space: nowrap;"> [0,0] </td>
40
+ </tr>
41
+</tbody>
42
+</table>
... ...
\ No newline at end of file