Summary of novel genes
| Entity | Tier 1 genes | Tier 2 genes | Tier 3 genes |
|---|---|---|---|
| DLBCL | 8 | 3 | 0 |
| PMBL | 6 | 8 | 0 |
---
config:
sankey:
showValues: true
linkColor: target
width: 600
height: 300
nodeAlignment: right
prefix: '('
suffix: ' genes)'
---
sankey-beta
This study, New Tier 1, 6
New Tier 1, PMBL Tier 1, 6
This study, New Tier 2, 8
New Tier 2, PMBL Tier 2, 8
This study, New Tier 3, 0
New Tier 3, PMBL Tier 3, 0
All other PMBL studies, PMBL Tier 1, 40
All other PMBL studies, PMBL Tier 2, 104
All other PMBL studies, PMBL Tier 3, 0
Novel genes reported in this study
Tier 1
| New gene | DLBCL tier | PMBL tier | Average variant quality | QC outcome |
|---|---|---|---|---|
| CD83 | 1 | 1 | ||
| CREBBP | 1 | 1 | ||
| DUSP2 | 1 | 1 | ||
| FOXO1 | 1 | 2 | ||
| IL4R | 1 | 1 | ||
| MYC | 1 | 2 | ||
| PIM1 | 1 | 1 | ||
| SGK1 | 1 | 1 |
Tier 2
| New gene | DLBCL tier | PMBL tier | Average variant quality | QC outcome |
|---|---|---|---|---|
| BIRC3 | 2 | 2 | ||
| HRNR | 2 | |||
| LPHN3 | 2 | |||
| MCL1 | 2 | 2 | ★ ★ ★ ☆ ☆ | PASS |
| RFTN1 | 2 | 2 | ||
| WDR87 | 2 |
Details
Duns, Gerben, Elena Viganò, Daisuke Ennishi, Clementine Sarkozy, Stacy
S. Hung, Elizabeth Chavez, Katsuyoshi Takata, et al. 2021.
“Characterization of DLBCL with a PMBL
Gene Expression Signature.” Blood 138 (2): 136–48. https://doi.org/10.1182/blood.2020007683.


